This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.180136 (5 seq.)
>WENV180773868
ODIJ01003333
[ODIJ] human metagenome; G_DNA_Tongue dorsum
2203
2120
-
Leu
CAA
[ENA]
¡û
>WENV180783585
ODIQ01011701
[ODIQ] human metagenome; G_DNA_Tongue dorsum
151
234
+
Leu
CAA
[ENA]
¡û
>WENV180810712
ODJM01000222
[ODJM] human metagenome; G_DNA_Buccal mucosa
17150
17233
+
Leu
CAA
[ENA]
¡û
>WENV180920530
ODTH01008409
[ODTH] human metagenome; G_DNA_Tongue dorsum
2588
2505
-
Leu
CAA
[ENA]
¡û
>WENV181179009
OEJT01000933
[OEJT] human metagenome; G_DNA_Supragingival plaque
14107
14190
+
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK