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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.180320 (36 seq.)
>WENV180200379
OBAE01037358
[OBAE] human gut metagenome; human gut
549
634
+
Leu
CAA
[ENA]
¡û
>WENV180202617
OBAG01000399
[OBAG] human gut metagenome; human gut
22725
22810
+
Leu
CAA
[ENA]
¡û
>WENV181053201
ODYI01000049
[ODYI] human metagenome; G_DNA_Stool
100054
99969
-
Leu
CAA
[ENA]
¡û
>WENV181098760
OECI01000288
[OECI] human metagenome; G_DNA_Stool
67332
67247
-
Leu
CAA
[ENA]
¡û
>WENV181437265
OGDF01080934
[OGDF] human gut metagenome; human gut
704
619
-
Leu
CAA
[ENA]
¡û
>WENV181478836
OGFG01000185
[OGFG] metagenome; Human gut stool
52741
52656
-
Leu
CAA
[ENA]
¡û
>WENV181617719
OGMB01000687
[OGMB] metagenome; Human gut stool
17130
17215
+
Leu
CAA
[ENA]
¡û
>WENV181662366
OGOG01046768
[OGOG] human gut metagenome; faeces
532
617
+
Leu
CAA
[ENA]
¡û
>WENV181684738
OGOV01023415
[OGOV] human gut metagenome; faeces
554
639
+
Leu
CAA
[ENA]
¡û
>WENV181707728
OGPL01072346
[OGPL] human gut metagenome; faeces
589
674
+
Leu
CAA
[ENA]
¡û
>WENV181729364
OGQB01004375
[OGQB] human gut metagenome; faeces
579
494
-
Leu
CAA
[ENA]
¡û
>WENV181788437
OGRO01001297
[OGRO] human gut metagenome; faeces
18039
17954
-
Leu
CAA
[ENA]
¡û
>WENV181833609
OGUQ01004521
[OGUQ] metagenome; Human gut stool
5447
5362
-
Leu
CAA
[ENA]
¡û
>WENV181913076
OGYE01002836
[OGYE] human gut metagenome; faeces
1582
1497
-
Leu
CAA
[ENA]
¡û
>WENV182011919
OHBM01004721
[OHBM] human gut metagenome; faeces
922
1007
+
Leu
CAA
[ENA]
¡û
>WENV182018183
OHBW01035449
[OHBW] human gut metagenome; feces
282
197
-
Leu
CAA
[ENA]
¡û
>WENV182052040
OHEG01037388
[OHEG] human gut metagenome; feces
497
582
+
Leu
CAA
[ENA]
¡û
>WENV182144764
OHKW01038378
[OHKW] human gut metagenome; feces
183
98
-
Leu
CAA
[ENA]
¡û
>WENV182242344
OHSG01050486
[OHSG] human gut metagenome; feces
199
114
-
Leu
CAA
[ENA]
¡û
>WENV182343706
OIAK01038419
[OIAK] human gut metagenome; feces
222
137
-
Leu
CAA
[ENA]
¡û
>WENV182610170
OJJV01059574
[OJJV] metagenome; faeces
417
502
+
Leu
CAA
[ENA]
¡û
>WENV182638739
OJLA01023123
[OJLA] metagenome; faeces
1280
1195
-
Leu
CAA
[ENA]
¡û
>WENV182649407
OJMG01006647
[OJMG] human gut metagenome; feces
3835
3750
-
Leu
CAA
[ENA]
¡û
>WENV182665553
OJNH01000928
[OJNH] human gut metagenome; feces
22654
22569
-
Leu
CAA
[ENA]
¡û
>WENV182876942
OKRY01002090
[OKRY] human gut metagenome; faeces
6593
6508
-
Leu
CAA
[ENA]
¡û
>WENV183126337
OLNY01010062
[OLNY] human gut metagenome; faeces
2389
2474
+
Leu
CAA
[ENA]
¡û
>WENV183128026
OLNZ01001695
[OLNZ] human gut metagenome; faeces
258
173
-
Leu
CAA
[ENA]
¡û
>WENV183177171
OLPG01000415
[OLPG] human gut metagenome; faeces
2091
2006
-
Leu
CAA
[ENA]
¡û
>WENV183200848
OLPW01005778
[OLPW] human gut metagenome; faeces
512
427
-
Leu
CAA
[ENA]
¡û
>WENV183239541
OLRA01000959
[OLRA] human gut metagenome; faeces
586
501
-
Leu
CAA
[ENA]
¡û
>WENV183328113
OLWA01005129
[OLWA] human gut metagenome; faeces
1861
1776
-
Leu
CAA
[ENA]
¡û
>WENV183329235
OLWB01000100
[OLWB] human gut metagenome; faeces
17855
17940
+
Leu
CAA
[ENA]
¡û
>WENV183352417
OLWZ01021271
[OLWZ] human gut metagenome; feces
887
802
-
Leu
CAA
[ENA]
¡û
>WENV183365712
OLXN01030056
[OLXN] human gut metagenome; feces
327
242
-
Leu
CAA
[ENA]
¡û
>WENV170043198
CDYU01030993
[CDYU] gut metagenome; human stools
425
510
+
Leu
CAA
[ENA]
¡û
>WENV170059871
CDZH01064841
[CDZH] gut metagenome; human stools
134
49
-
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK