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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.181165 (8 seq.)
>WENV180156932
OAUW01000326
[OAUW] human gut metagenome; faeces
2200
2117
-
Leu
CAA
[ENA]
¡û
>WENV180193289
OAZW01000303
[OAZW] human gut metagenome; faeces
2200
2117
-
Leu
CAA
[ENA]
¡û
>WENV181771615
OGRC01014743
[OGRC] human gut metagenome; faeces
948
865
-
Leu
CAA
[ENA]
¡û
>WENV183103163
OLNJ01000013
[OLNJ] human gut metagenome; faeces
113896
113979
+
Leu
CAA
[ENA]
¡û
>WENV183204385
OLPZ01000005
[OLPZ] human gut metagenome; faeces
803
886
+
Leu
CAA
[ENA]
¡û
>WENV183248811
OLRG01000230
[OLRG] human gut metagenome; faeces
56918
57001
+
Leu
CAA
[ENA]
¡û
>WENV183306276
OLSX01019500
[OLSX] human gut metagenome; faeces
2237
2154
-
Leu
CAA
[ENA]
¡û
>WENV183306730
OLTB01000022
[OLTB] human gut metagenome; faeces
1815
1898
+
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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