Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.187848 (140 seq.)
	>WENV180004284	FLRR01067205	[FLRR] metagenome; saliva		132	56	-	Val	CAC	[ENA]	○
	>WENV180004410	FLRS01001962	[FLRS] metagenome; saliva		1275	1351	+	Val	CAC	[ENA]	○
	>WENV180005764	FLRW01321614	[FLRW] metagenome; saliva		3835	3759	-	Val	CAC	[ENA]	○
	>WENV180008162	FLSB01004309	[FLSB] metagenome; saliva		742	818	+	Val	CAC	[ENA]	○
	>WENV180010028	FLSC01242204	[FLSC] metagenome; saliva		77	153	+	Val	CAC	[ENA]	○
	>WENV180225769	OBBP01000002	[OBBP] human oral metagenome; human oral		8993	8917	-	Val	CAC	[ENA]	○
	>WENV180550043	OCIZ01007428	[OCIZ] human oral metagenome; human oral		716	792	+	Val	CAC	[ENA]	○
	>WENV180551419	OCJF01031818	[OCJF] human oral metagenome; human oral		297	221	-	Val	CAC	[ENA]	○
	>WENV180709021	ODFJ01018253	[ODFJ] human metagenome; G_DNA_Tongue dorsum		727	803	+	Val	CAC	[ENA]	○
	>WENV180709099	ODFJ01023305	[ODFJ] human metagenome; G_DNA_Tongue dorsum		463	539	+	Val	CAC	[ENA]	○
	>WENV180717148	ODGA01045145	[ODGA] human metagenome; G_DNA_Buccal mucosa		228	152	-	Val	CAC	[ENA]	○
	>WENV180719954	ODGJ01011095	[ODGJ] human metagenome; G_DNA_Tongue dorsum		2510	2434	-	Val	CAC	[ENA]	○
	>WENV180721218	ODGK01028527	[ODGK] human metagenome; G_DNA_Palatine Tonsils		231	155	-	Val	CAC	[ENA]	○
	>WENV180724226	ODGR01000249	[ODGR] human metagenome; G_DNA_Tongue dorsum		2588	2664	+	Val	CAC	[ENA]	○
	>WENV180727326	ODGU01004334	[ODGU] human metagenome; G_DNA_Supragingival plaque		3860	3784	-	Val	CAC	[ENA]	○
	>WENV180731865	ODGW01025020	[ODGW] human metagenome; G_DNA_Supragingival plaque		424	500	+	Val	CAC	[ENA]	○
	>WENV180733273	ODGY01093284	[ODGY] human metagenome; G_DNA_Supragingival plaque		203	127	-	Val	CAC	[ENA]	○
	>WENV180765127	ODIB01023842	[ODIB] human metagenome; G_DNA_Supragingival plaque		568	492	-	Val	CAC	[ENA]	○
	>WENV180768307	ODIG01004833	[ODIG] human metagenome; G_DNA_Tongue dorsum		5364	5440	+	Val	CAC	[ENA]	○
	>WENV180768816	ODIG01018180	[ODIG] human metagenome; G_DNA_Tongue dorsum		2162	2086	-	Val	CAC	[ENA]	○
	>WENV180769257	ODIG01048988	[ODIG] human metagenome; G_DNA_Tongue dorsum		766	842	+	Val	CAC	[ENA]	○
	>WENV180769673	ODIG01128183	[ODIG] human metagenome; G_DNA_Tongue dorsum		200	276	+	Val	CAC	[ENA]	○
	>WENV180772809	ODIH01273051	[ODIH] human metagenome; G_DNA_Stool		159	235	+	Val	CAC	[ENA]	○
	>WENV180773199	ODII01035548	[ODII] human metagenome; G_DNA_Buccal mucosa		140	216	+	Val	CAC	[ENA]	○
	>WENV180779896	ODIN01023324	[ODIN] human metagenome; G_DNA_Throat		28	104	+	Val	CAC	[ENA]	○
	>WENV180783801	ODIQ01028178	[ODIQ] human metagenome; G_DNA_Tongue dorsum		752	676	-	Val	CAC	[ENA]	○
	>WENV180789417	ODIS01488637	[ODIS] human metagenome; G_DNA_Supragingival plaque		77	1	-	Val	CAC	[ENA]	○
	>WENV180790317	ODIT01008509	[ODIT] human metagenome; G_DNA_Tongue dorsum		1462	1538	+	Val	CAC	[ENA]	○
	>WENV180790664	ODIT01027502	[ODIT] human metagenome; G_DNA_Tongue dorsum		376	452	+	Val	CAC	[ENA]	○
	>WENV180791963	ODIW01000016	[ODIW] human metagenome; G_DNA_Tongue dorsum		83594	83670	+	Val	CAC	[ENA]	○
	>WENV180794620	ODIZ01002294	[ODIZ] human metagenome; G_DNA_Tongue dorsum		4482	4406	-	Val	CAC	[ENA]	○
	>WENV180794811	ODIZ01006367	[ODIZ] human metagenome; G_DNA_Tongue dorsum		1830	1754	-	Val	CAC	[ENA]	○
	>WENV180795138	ODIZ01034483	[ODIZ] human metagenome; G_DNA_Tongue dorsum		22	98	+	Val	CAC	[ENA]	○
	>WENV180796227	ODJB01002190	[ODJB] human metagenome; G_DNA_Supragingival plaque		7974	8050	+	Val	CAC	[ENA]	○
	>WENV180802448	ODJE01002036	[ODJE] human metagenome; G_DNA_Tongue dorsum		774	698	-	Val	CAC	[ENA]	○
	>WENV180804013	ODJG01000318	[ODJG] human metagenome; G_DNA_Supragingival plaque		11978	11902	-	Val	CAC	[ENA]	○
	>WENV180807543	ODJI01003700	[ODJI] human metagenome; G_DNA_Tongue dorsum		763	687	-	Val	CAC	[ENA]	○
	>WENV180808598	ODJK01000267	[ODJK] human metagenome; G_DNA_Subgingival plaque		24348	24272	-	Val	CAC	[ENA]	○
	>WENV180813108	ODJO01000031	[ODJO] human metagenome; G_DNA_Supragingival plaque		64661	64737	+	Val	CAC	[ENA]	○
	>WENV180816808	ODJP01063860	[ODJP] human metagenome; G_DNA_Tongue dorsum		25	101	+	Val	CAC	[ENA]	○
	>WENV180820103	ODJR01001879	[ODJR] human metagenome; G_DNA_Tongue dorsum		615	539	-	Val	CAC	[ENA]	○
	>WENV180820686	ODJR01022739	[ODJR] human metagenome; G_DNA_Tongue dorsum		83	159	+	Val	CAC	[ENA]	○
	>WENV180823632	ODJW01083169	[ODJW] human metagenome; G_DNA_Supragingival plaque		108	184	+	Val	CAC	[ENA]	○
	>WENV180830566	ODKB01005990	[ODKB] human metagenome; G_DNA_Tongue dorsum		2439	2515	+	Val	CAC	[ENA]	○
	>WENV180831641	ODKC01000017	[ODKC] human metagenome; G_DNA_Supragingival plaque		56694	56770	+	Val	CAC	[ENA]	○
	>WENV180835408	ODKE01003050	[ODKE] human metagenome; G_DNA_Supragingival plaque		1894	1818	-	Val	CAC	[ENA]	○
	>WENV180846422	ODKT01010758	[ODKT] human metagenome; G_DNA_Supragingival plaque		1816	1892	+	Val	CAC	[ENA]	○
	>WENV180852613	ODKW01002631	[ODKW] human metagenome; G_DNA_Tongue dorsum		763	687	-	Val	CAC	[ENA]	○
	>WENV180852793	ODKW01006274	[ODKW] human metagenome; G_DNA_Tongue dorsum		209	285	+	Val	CAC	[ENA]	○
	>WENV180853733	ODKX01000036	[ODKX] human metagenome; G_DNA_Tongue dorsum		11389	11313	-	Val	CAC	[ENA]	○
	>WENV180856207	ODKZ01005870	[ODKZ] human metagenome; G_DNA_Tongue dorsum		2771	2847	+	Val	CAC	[ENA]	○
	>WENV180858598	ODLC01013762	[ODLC] human metagenome; G_DNA_Tongue dorsum		1048	1124	+	Val	CAC	[ENA]	○
	>WENV180860652	ODLE01000005	[ODLE] human metagenome; G_DNA_Tongue dorsum		150508	150432	-	Val	CAC	[ENA]	○
	>WENV180865396	ODLJ01000021	[ODLJ] human metagenome; G_DNA_Tongue dorsum		99737	99661	-	Val	CAC	[ENA]	○
	>WENV180874893	ODLQ01009798	[ODLQ] human metagenome; G_DNA_Tongue dorsum		911	987	+	Val	CAC	[ENA]	○
	>WENV180874919	ODLQ01012096	[ODLQ] human metagenome; G_DNA_Tongue dorsum		833	757	-	Val	CAC	[ENA]	○
	>WENV180877910	ODLV01005483	[ODLV] human metagenome; G_DNA_Tongue dorsum		2771	2847	+	Val	CAC	[ENA]	○
	>WENV180888053	ODMN01000029	[ODMN] human metagenome; G_DNA_Supragingival plaque		57561	57637	+	Val	CAC	[ENA]	○
	>WENV180917723	ODTD01088393	[ODTD] human metagenome; G_DNA_Tongue dorsum		218	294	+	Val	CAC	[ENA]	○
	>WENV180923869	ODTK01000295	[ODTK] human metagenome; G_DNA_Supragingival plaque		32497	32573	+	Val	CAC	[ENA]	○
	>WENV180929007	ODTN01000299	[ODTN] human metagenome; G_DNA_Tongue dorsum		8588	8664	+	Val	CAC	[ENA]	○
	>WENV180939014	ODTX01012371	[ODTX] human metagenome; G_DNA_Supragingival plaque		2110	2186	+	Val	CAC	[ENA]	○
	>WENV180943183	ODUC01000013	[ODUC] human metagenome; G_DNA_Supragingival plaque		78678	78602	-	Val	CAC	[ENA]	○
	>WENV180944629	ODUC01026585	[ODUC] human metagenome; G_DNA_Supragingival plaque		826	902	+	Val	CAC	[ENA]	○
	>WENV180948522	ODUG01001880	[ODUG] human metagenome; G_DNA_Tongue dorsum		8624	8700	+	Val	CAC	[ENA]	○
	>WENV180948821	ODUG01004308	[ODUG] human metagenome; G_DNA_Tongue dorsum		2327	2251	-	Val	CAC	[ENA]	○
	>WENV180951174	ODUH01011210	[ODUH] human metagenome; G_DNA_Subgingival plaque		627	703	+	Val	CAC	[ENA]	○
	>WENV180954326	ODUJ01001647	[ODUJ] human metagenome; G_DNA_Tongue dorsum		9026	9102	+	Val	CAC	[ENA]	○
	>WENV180954510	ODUJ01003183	[ODUJ] human metagenome; G_DNA_Tongue dorsum		4960	4884	-	Val	CAC	[ENA]	○
	>WENV180955073	ODUJ01030353	[ODUJ] human metagenome; G_DNA_Tongue dorsum		738	662	-	Val	CAC	[ENA]	○
	>WENV180967689	ODUT01002383	[ODUT] human metagenome; G_DNA_Tongue dorsum		7207	7283	+	Val	CAC	[ENA]	○
	>WENV180968304	ODUT01017790	[ODUT] human metagenome; G_DNA_Tongue dorsum		631	555	-	Val	CAC	[ENA]	○
	>WENV180975518	ODUY01008766	[ODUY] human metagenome; G_DNA_Supragingival plaque		2543	2619	+	Val	CAC	[ENA]	○
	>WENV180980762	ODVE01001715	[ODVE] human metagenome; G_DNA_Supragingival plaque		8169	8245	+	Val	CAC	[ENA]	○
	>WENV180981153	ODVE01008241	[ODVE] human metagenome; G_DNA_Supragingival plaque		2325	2249	-	Val	CAC	[ENA]	○
	>WENV180982837	ODVF01000980	[ODVF] human metagenome; G_DNA_Supragingival plaque		1998	1922	-	Val	CAC	[ENA]	○
	>WENV180984967	ODVJ01000212	[ODVJ] human metagenome; G_DNA_Tongue dorsum		21574	21498	-	Val	CAC	[ENA]	○
	>WENV180987610	ODVK01053206	[ODVK] human metagenome; G_DNA_Supragingival plaque		372	448	+	Val	CAC	[ENA]	○
	>WENV180990442	ODVN01001390	[ODVN] human metagenome; G_DNA_Tongue dorsum		10738	10814	+	Val	CAC	[ENA]	○
	>WENV180990516	ODVN01001904	[ODVN] human metagenome; G_DNA_Tongue dorsum		3616	3540	-	Val	CAC	[ENA]	○
	>WENV181003320	ODVX01008870	[ODVX] human metagenome; G_DNA_Supragingival plaque		1809	1885	+	Val	CAC	[ENA]	○
	>WENV181008407	ODWE01004906	[ODWE] human metagenome; G_DNA_Supragingival plaque		4184	4260	+	Val	CAC	[ENA]	○
	>WENV181011330	ODWI01020219	[ODWI] human metagenome; G_DNA_Tongue dorsum		383	459	+	Val	CAC	[ENA]	○
	>WENV181016523	ODWR01001935	[ODWR] human metagenome; G_DNA_Tongue dorsum		736	660	-	Val	CAC	[ENA]	○
	>WENV181017488	ODWR01095146	[ODWR] human metagenome; G_DNA_Tongue dorsum		22	98	+	Val	CAC	[ENA]	○
	>WENV181021612	ODWV01023092	[ODWV] human metagenome; G_DNA_Tongue dorsum		136	60	-	Val	CAC	[ENA]	○
	>WENV181021643	ODWV01025653	[ODWV] human metagenome; G_DNA_Tongue dorsum		858	934	+	Val	CAC	[ENA]	○
	>WENV181033433	ODXN01007662	[ODXN] human metagenome; G_DNA_Tongue dorsum		2935	2859	-	Val	CAC	[ENA]	○
	>WENV181041546	ODXS01017137	[ODXS] human metagenome; G_DNA_Tongue dorsum		136	60	-	Val	CAC	[ENA]	○
	>WENV181044166	ODXV01003644	[ODXV] human metagenome; G_DNA_Tongue dorsum		5639	5715	+	Val	CAC	[ENA]	○
	>WENV181045170	ODXW01000013	[ODXW] human metagenome; G_DNA_Tongue dorsum		86473	86397	-	Val	CAC	[ENA]	○
	>WENV181052719	ODYG01016091	[ODYG] human metagenome; G_DNA_Tongue dorsum		134	210	+	Val	CAC	[ENA]	○
	>WENV181057906	ODYL01001708	[ODYL] human metagenome; G_DNA_Tongue dorsum		4370	4294	-	Val	CAC	[ENA]	○
	>WENV181057960	ODYL01002051	[ODYL] human metagenome; G_DNA_Tongue dorsum		4364	4288	-	Val	CAC	[ENA]	○
	>WENV181060397	ODYM01163581	[ODYM] human metagenome; G_DNA_Tongue dorsum		79	155	+	Val	CAC	[ENA]	○
	>WENV181067088	ODZI01006112	[ODZI] human metagenome; G_DNA_Supragingival plaque		1071	995	-	Val	CAC	[ENA]	○
	>WENV181073638	OEAO01000683	[OEAO] human metagenome; G_DNA_Tongue dorsum		20912	20836	-	Val	CAC	[ENA]	○
	>WENV181074275	OEAO01005253	[OEAO] human metagenome; G_DNA_Tongue dorsum		2625	2701	+	Val	CAC	[ENA]	○
	>WENV181084267	OEAV01118818	[OEAV] human metagenome; G_DNA_Supragingival plaque		161	237	+	Val	CAC	[ENA]	○
	>WENV181086418	OEAY01000604	[OEAY] human metagenome; G_DNA_Tongue dorsum		365	441	+	Val	CAC	[ENA]	○
	>WENV181094517	OEBY01000252	[OEBY] human metagenome; G_DNA_Tongue dorsum		4328	4404	+	Val	CAC	[ENA]	○
	>WENV181095495	OEBY01010020	[OEBY] human metagenome; G_DNA_Tongue dorsum		2403	2327	-	Val	CAC	[ENA]	○
	>WENV181097717	OECA01022024	[OECA] human metagenome; G_DNA_Tongue dorsum		595	519	-	Val	CAC	[ENA]	○
	>WENV181103926	OECV01010211	[OECV] human metagenome; G_DNA_Throat		947	1023	+	Val	CAC	[ENA]	○
	>WENV181108093	OEEI01084992	[OEEI] human metagenome; G_DNA_Supragingival plaque		290	366	+	Val	CAC	[ENA]	○
	>WENV181115628	OEEO01178390	[OEEO] human metagenome; G_DNA_Supragingival plaque		145	221	+	Val	CAC	[ENA]	○
	>WENV181124259	OEFQ01039286	[OEFQ] human metagenome; G_DNA_Supragingival plaque		113	189	+	Val	CAC	[ENA]	○
	>WENV181125477	OEFT01135439	[OEFT] human metagenome; G_DNA_Tongue dorsum		110	186	+	Val	CAC	[ENA]	○
	>WENV181135258	OEGG01007580	[OEGG] human metagenome; G_DNA_Tongue dorsum		368	444	+	Val	CAC	[ENA]	○
	>WENV181141504	OEGT01006426	[OEGT] human metagenome; G_DNA_Throat		733	657	-	Val	CAC	[ENA]	○
	>WENV181141590	OEGT01009537	[OEGT] human metagenome; G_DNA_Throat		211	135	-	Val	CAC	[ENA]	○
	>WENV181143416	OEHM01000729	[OEHM] human metagenome; G_DNA_Supragingival plaque		11060	11136	+	Val	CAC	[ENA]	○
	>WENV181150281	OEHW01001355	[OEHW] human metagenome; G_DNA_Tongue dorsum		356	280	-	Val	CAC	[ENA]	○
	>WENV181150732	OEHW01006440	[OEHW] human metagenome; G_DNA_Tongue dorsum		4439	4515	+	Val	CAC	[ENA]	○
	>WENV181157542	OEIG01010470	[OEIG] human metagenome; G_DNA_Hard palate		741	665	-	Val	CAC	[ENA]	○
	>WENV181159155	OEIH01067856	[OEIH] human metagenome; G_DNA_Supragingival plaque		243	167	-	Val	CAC	[ENA]	○
	>WENV181161197	OEIK01211324	[OEIK] human metagenome; G_DNA_Supragingival plaque		133	57	-	Val	CAC	[ENA]	○
	>WENV181177574	OEJS01005911	[OEJS] human metagenome; G_DNA_Supragingival plaque		637	561	-	Val	CAC	[ENA]	○
	>WENV181179140	OEJT01001533	[OEJT] human metagenome; G_DNA_Supragingival plaque		1217	1141	-	Val	CAC	[ENA]	○
	>WENV181917437	OGYG01018144	[OGYG] human gut metagenome; faeces		961	1037	+	Val	CAC	[ENA]	○
	>WENV181919906	OGYI01005081	[OGYI] human gut metagenome; faeces		4037	3961	-	Val	CAC	[ENA]	○
	>WENV181953456	OGZI01008343	[OGZI] human gut metagenome; faeces		2692	2768	+	Val	CAC	[ENA]	○
	>WENV181980224	OHAF01013146	[OHAF] human gut metagenome; faeces		2050	1974	-	Val	CAC	[ENA]	○
	>WENV182165052	OHMN01018953	[OHMN] human gut metagenome; faeces		947	1023	+	Val	CAC	[ENA]	○
	>WENV182519703	OIWP01050211	[OIWP] human gut metagenome; faeces		124	200	+	Val	CAC	[ENA]	○
	>WENV182892001	OKSH01010981	[OKSH] human gut metagenome; faeces		479	555	+	Val	CAC	[ENA]	○
	>WENV183242354	OLRB01028609	[OLRB] human gut metagenome; faeces		351	275	-	Val	CAC	[ENA]	○
	>WENV183510742	OMHQ01007109	[OMHQ] human oral metagenome; human oral		558	634	+	Val	CAC	[ENA]	○
	>C191173690	CP040004	Unclassified	Candidatus Nanosynbacter featherlites BB001 [CP040004]	425966	426042	+	Val	CAC	-	○
	>W2010362333	CADDWL010000087	Unclassified	Candidatus Saccharibacteria bacterium [CADDWL]	9885	9961	+	Val	CAC	[ENA]	○
	>W2011551575	SDRM01000001	Unclassified	TM7 phylum sp. oral taxon 352 TM7_HOT_352-SAG8 [SDRM]	13116	13040	-	Val	CAC	[ENA]	○
	>W2011551627	SDRN01000019	Unclassified	TM7 phylum sp. oral taxon 352 TM7_HOT_352-SAG7 [SDRN]	6784	6708	-	Val	CAC	[ENA]	○
	>W2011551685	SDRP01000026	Unclassified	TM7 phylum sp. oral taxon 352 TM7_HOT_352-SAG4 [SDRP]	2632	2556	-	Val	CAC	[ENA]	○
	>W2011551721	SDRQ01000012	Unclassified	TM7 phylum sp. oral taxon 352 TM7_HOT_352-SAG3 [SDRQ]	3881	3957	+	Val	CAC	[ENA]	○
	>W2011552070	SDSB01000005	Unclassified	TM7 phylum sp. oral taxon 352 TM7_HOT_352-SAG5 [SDSB]	14834	14758	-	Val	CAC	[ENA]	○
	>W2110104604	CAJGBL010000086	Unclassified	Candidatus Saccharibacteria bacterium [CAJGBL]	2667	2591	-	Val	CAC	[ENA]	○
	>C201082875	CP040002	Unclassified	Candidatus Saccharibacteria bacterium oral taxon 488 AC002 [CP040002]	454840	454916	+	Val	CAC	-	○
	>C201295054	CP058260	Unclassified	Candidatus Saccharibacteria bacterium oral taxon 488 HB001 [CP058260]	454813	454889	+	Val	CAC	-	○
	>C211345771	CP076459	Unclassified	Candidatus Saccharibacteria bacterium IHU2 [CP076459]	406284	406360	+	Val	CAC	-	○
	>C231663677	OX335598	Unclassified	Candidatus Saccharibacteria bacterium [OX335598]	356458	356534	+	Val	CAC	-	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

BACK