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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.188343 (195 seq.)
>W1710866905
LMHW01000010
Bacteroidota
Flavobacterium sp. Root186 [LMHW]
550014
550090
+
Ala
TGC
[ENA]
¡û
>W1710868882
LMJL01000009
Bacteroidota
Flavobacterium sp. Root935 [LMJL]
2027
2101
+
Ala
TGC
[ENA]
¡û
>W1710889290
LNAL01000001
Bacteroidota
Solirubrum puertoriconensis MC1A [LNAL]
829
903
+
Ala
TGC
[ENA]
¡û
>W1711139003
LVEO01000032
Bacteroidota
Flavobacterium glycines [LVEO]
3374
3298
-
Ala
TGC
[ENA]
¡û
>W1711146818
LVJE01000012
Bacteroidota
Flavobacterium fryxellicola [LVJE]
2544
2618
+
Ala
TGC
[ENA]
¡û
>W1711629344
MPOV01000067
Bacteroidota
Proteiniphilum sp. EBM-39 [MPOV]
1091
1167
+
Ala
TGC
[ENA]
¡û
>W1711751633
MUNX01000074
Bacteroidota
Flavobacterium sp. A45 [MUNX]
283
209
-
Ala
TGC
[ENA]
¡û
>W1711751647
MUNX01000135
Bacteroidota
Flavobacterium sp. A45 [MUNX]
404
328
-
Ala
TGC
[ENA]
¡û
>W1711751652
MUNX01000139
Bacteroidota
Flavobacterium sp. A45 [MUNX]
393
317
-
Ala
TGC
[ENA]
¡û
>PL171000547
CP003667
Bacteroidetes
Prevotella sp. oral taxon 299 str. F0039 plasmid:unnamed
1522125
1522199
+
Ala
TGC
[ENA]
¡û
>W131225270
AUDK01000043
Bacteroidota
Flavobacterium daejeonense DSM 17708 [AUDK]
3309
3233
-
Ala
TGC
[ENA]
¡û
>WENV180026365
FTIT01002492
[FTIT] metagenome; soil
2200
2126
-
Ala
TGC
[ENA]
¢þ
>WENV180124276
OASX01005127
[OASX] human gut metagenome; faeces
403
477
+
Ala
TGC
[ENA]
¢þ
>WENV180124455
OASX01014588
[OASX] human gut metagenome; faeces
315
389
+
Ala
TGC
[ENA]
¢þ
>WENV180131391
OATG01015881
[OATG] human gut metagenome; faeces
403
477
+
Ala
TGC
[ENA]
¢þ
>WENV180238694
OBDA01016073
[OBDA] human gut metagenome; human gut
676
602
-
Ala
TGC
[ENA]
¢þ
>WENV180243454
OBDJ01022314
[OBDJ] human gut metagenome; human gut
145
219
+
Ala
TGC
[ENA]
¢þ
>WENV180245135
OBDM01002691
[OBDM] human gut metagenome; human gut
341
415
+
Ala
TGC
[ENA]
¢þ
>WENV180297984
OBJA01130354
[OBJA] soil metagenome; sediment, water from around vicinity
198
124
-
Ala
TGC
[ENA]
¢þ
>W141027950
AKZJ01000016
Bacteroidota
Pedobacter arcticus A12 [AKZJ]
3411
3335
-
Ala
TGC
[ENA]
¡û
>WENV180451496
OBXI01016032
[OBXI] human gut metagenome; faeces
337
411
+
Ala
TGC
[ENA]
¢þ
>WENV180461296
OBXZ01057592
[OBXZ] human gut metagenome; faeces
1
75
+
Ala
TGC
[ENA]
¢þ
>WENV180526780
OCHI01066466
[OCHI] human gut metagenome; human gut
315
241
-
Ala
TGC
[ENA]
¢þ
>WENV180574901
OCLX01012817
[OCLX] human gut metagenome; human gut
1047
973
-
Ala
TGC
[ENA]
¢þ
>WENV180579014
OCMC01018232
[OCMC] human gut metagenome; human gut
144
218
+
Ala
TGC
[ENA]
¢þ
>WENV180587103
OCON01043585
[OCON] marine metagenome; seawater
476
401
-
Ala
TGC
[ENA]
¢þ
>WENV180608431
OCPU01042785
[OCPU] human gut metagenome; human gut
336
410
+
Ala
TGC
[ENA]
¢þ
>WENV180609964
OCPV01038649
[OCPV] human gut metagenome; human gut
469
543
+
Ala
TGC
[ENA]
¢þ
>WENV180705470
ODEJ01005633
[ODEJ] human metagenome; G_DNA_Tongue dorsum
275
349
+
Ala
TGC
[ENA]
¢þ
>WENV180705531
ODEJ01007230
[ODEJ] human metagenome; G_DNA_Tongue dorsum
163
237
+
Ala
TGC
[ENA]
¢þ
>WENV180715791
ODFW01047714
[ODFW] human metagenome; G_DNA_Stool
348
422
+
Ala
TGC
[ENA]
¢þ
>WENV180725794
ODGS01002557
[ODGS] human metagenome; G_DNA_Attached/Keratinized gingiva
2286
2212
-
Ala
TGC
[ENA]
¢þ
>WENV180738893
ODHD01000967
[ODHD] human metagenome; G_DNA_Supragingival plaque
12204
12130
-
Ala
TGC
[ENA]
¢þ
>WENV180742630
ODHH01011828
[ODHH] human metagenome; G_DNA_Stool
329
403
+
Ala
TGC
[ENA]
¢þ
>WENV180743195
ODHH01141041
[ODHH] human metagenome; G_DNA_Stool
292
218
-
Ala
TGC
[ENA]
¢þ
>WENV180863992
ODLH01006410
[ODLH] human metagenome; G_DNA_Tongue dorsum
3444
3370
-
Ala
TGC
[ENA]
¢þ
>WENV180864272
ODLH01021027
[ODLH] human metagenome; G_DNA_Tongue dorsum
331
405
+
Ala
TGC
[ENA]
¢þ
>WENV180936710
ODTU01063121
[ODTU] human metagenome; G_DNA_Stool
4
78
+
Ala
TGC
[ENA]
¢þ
>WENV180963011
ODUN01053152
[ODUN] human metagenome; G_DNA_Stool
145
219
+
Ala
TGC
[ENA]
¢þ
>WENV180973930
ODUW01029325
[ODUW] human metagenome; G_DNA_Supragingival plaque
877
803
-
Ala
TGC
[ENA]
¢þ
>WENV180985521
ODVJ01007079
[ODVJ] human metagenome; G_DNA_Tongue dorsum
278
352
+
Ala
TGC
[ENA]
¢þ
>WENV180985726
ODVJ01013655
[ODVJ] human metagenome; G_DNA_Tongue dorsum
276
350
+
Ala
TGC
[ENA]
¢þ
>WENV180992317
ODVP01000810
[ODVP] human metagenome; G_DNA_Buccal mucosa
5505
5431
-
Ala
TGC
[ENA]
¢þ
>WENV181010391
ODWH01005460
[ODWH] human metagenome; G_DNA_Buccal mucosa
646
572
-
Ala
TGC
[ENA]
¢þ
>WENV181052812
ODYG01038772
[ODYG] human metagenome; G_DNA_Tongue dorsum
87
13
-
Ala
TGC
[ENA]
¢þ
>WENV181069254
ODZZ01021866
[ODZZ] human metagenome; G_DNA_Tongue dorsum
74
148
+
Ala
TGC
[ENA]
¢þ
>WENV181072698
OEAN01017190
[OEAN] human metagenome; G_DNA_Stool
385
459
+
Ala
TGC
[ENA]
¢þ
>WENV181106972
OEEI01001051
[OEEI] human metagenome; G_DNA_Supragingival plaque
13611
13537
-
Ala
TGC
[ENA]
¢þ
>WENV181156532
OEIE01027175
[OEIE] human metagenome; G_DNA_Supragingival plaque
232
306
+
Ala
TGC
[ENA]
¢þ
>WENV181223560
OFDC01032700
[OFDC] hot springs metagenome; Water
365
439
+
Ala
TGC
[ENA]
¢þ
>WENV181323452
OFKY01000047
[OFKY] marine metagenome; sea ice
3739
3665
-
Ala
TGC
[ENA]
¢þ
>WENV181383944
OFRH01001651
[OFRH] wastewater metagenome; Exp Tend NO 100WW
878
952
+
Ala
TGC
[ENA]
¢þ
>WENV181398264
OFSD01045301
[OFSD] human gut metagenome; human gut
347
421
+
Ala
TGC
[ENA]
¢þ
>WENV181520033
OGHC01019005
[OGHC] metagenome; Human gut stool
342
416
+
Ala
TGC
[ENA]
¢þ
>WENV181524363
OGHH01019214
[OGHH] metagenome; Human gut stool
144
218
+
Ala
TGC
[ENA]
¢þ
>WENV181626906
OGMM01004233
[OGMM] metagenome; Human gut stool
69
143
+
Ala
TGC
[ENA]
¢þ
>WENV181728347
OGQA01045673
[OGQA] human gut metagenome; faeces
68
142
+
Ala
TGC
[ENA]
¢þ
>WENV181729892
OGQB01031368
[OGQB] human gut metagenome; faeces
1038
964
-
Ala
TGC
[ENA]
¢þ
>WENV181779861
OGRI01027914
[OGRI] human gut metagenome; faeces
349
423
+
Ala
TGC
[ENA]
¢þ
>WENV181843061
OGVU01000302
[OGVU] freshwater metagenome; freshwater
2426
2352
-
Ala
TGC
[ENA]
¢þ
>WENV181852788
OGWH01002870
[OGWH] freshwater metagenome; freshwater
1214
1138
-
Ala
TGC
[ENA]
¢þ
>WENV181898918
OGXT01026625
[OGXT] human gut metagenome; faeces
349
423
+
Ala
TGC
[ENA]
¢þ
>WENV182019615
OHBY01011992
[OHBY] human gut metagenome; feces
360
434
+
Ala
TGC
[ENA]
¢þ
>WENV182080732
OHGI01011055
[OHGI] human gut metagenome; feces
816
742
-
Ala
TGC
[ENA]
¢þ
>WENV182112437
OHIU01008527
[OHIU] human gut metagenome; feces
306
380
+
Ala
TGC
[ENA]
¢þ
>WENV182145275
OHKX01004044
[OHKX] human gut metagenome; feces
1965
1891
-
Ala
TGC
[ENA]
¢þ
>WENV182216633
OHQN01009256
[OHQN] human gut metagenome; feces
1078
1004
-
Ala
TGC
[ENA]
¢þ
>W141222928
BACV01000023
Bacteroidota
Cytophagales bacterium B6 B6 [BACV]
5680
5604
-
Ala
TGC
[ENA]
¡û
>WENV182321671
OHYM01004797
[OHYM] human gut metagenome; feces
1847
1773
-
Ala
TGC
[ENA]
¢þ
>WENV182333304
OHZK01026555
[OHZK] human gut metagenome; feces
1047
973
-
Ala
TGC
[ENA]
¢þ
>WENV182358351
OIBU01022369
[OIBU] human gut metagenome; feces
261
187
-
Ala
TGC
[ENA]
¢þ
>WENV182405293
OIEV01002374
[OIEV] human gut metagenome; human gut
2128
2054
-
Ala
TGC
[ENA]
¢þ
>WENV182405408
OIEV01004062
[OIEV] human gut metagenome; human gut
966
1040
+
Ala
TGC
[ENA]
¢þ
>WENV182405526
OIEV01008008
[OIEV] human gut metagenome; human gut
997
923
-
Ala
TGC
[ENA]
¢þ
>WENV182514798
OIWM01032308
[OIWM] human gut metagenome; faeces
1038
964
-
Ala
TGC
[ENA]
¢þ
>WENV182597016
OJJA01000708
[OJJA] metagenome; faeces
2714
2640
-
Ala
TGC
[ENA]
¢þ
>WENV182597151
OJJA01004313
[OJJA] metagenome; faeces
162
236
+
Ala
TGC
[ENA]
¢þ
>WENV182597339
OJJA01027737
[OJJA] metagenome; faeces
332
258
-
Ala
TGC
[ENA]
¢þ
>WENV182636884
OJLA01000147
[OJLA] metagenome; faeces
65874
65798
-
Ala
TGC
[ENA]
¢þ
>WENV182638650
OJLA01019759
[OJLA] metagenome; faeces
973
1047
+
Ala
TGC
[ENA]
¢þ
>WENV182697739
OJOL01026477
[OJOL] human gut metagenome; human gut
323
397
+
Ala
TGC
[ENA]
¢þ
>WENV182729596
OJPX01040416
[OJPX] human gut metagenome; stool sample
270
344
+
Ala
TGC
[ENA]
¢þ
>WENV182751023
OJQZ01022916
[OJQZ] human gut metagenome; stool sample
664
590
-
Ala
TGC
[ENA]
¢þ
>WENV182755889
OJRF01006354
[OJRF] human gut metagenome; stool sample
266
192
-
Ala
TGC
[ENA]
¢þ
>WENV182834833
OKFG01001198
[OKFG] human gut metagenome; human gut
981
1055
+
Ala
TGC
[ENA]
¢þ
>WENV182898641
OKSR01018686
[OKSR] human gut metagenome; feces
144
218
+
Ala
TGC
[ENA]
¢þ
>WENV182915917
OKTS01007446
[OKTS] human gut metagenome; feces
1097
1023
-
Ala
TGC
[ENA]
¢þ
>WENV182928246
OKUN01041360
[OKUN] human gut metagenome; feces
240
166
-
Ala
TGC
[ENA]
¢þ
>W141291950
JATV01000015
Bacteroidota
Flavobacterium succinicans LMG 10402 [JATV]
83024
82948
-
Ala
TGC
[ENA]
¡û
>WENV182955242
OKWC01004639
[OKWC] human gut metagenome; human gut
1106
1032
-
Ala
TGC
[ENA]
¢þ
>WENV182982590
OKZC01017529
[OKZC] human gut metagenome; human gut
664
590
-
Ala
TGC
[ENA]
¢þ
>WENV183124664
OLNW01029851
[OLNW] human gut metagenome; faeces
626
700
+
Ala
TGC
[ENA]
¢þ
>WENV183218138
OLQI01019188
[OLQI] human gut metagenome; faeces
1038
964
-
Ala
TGC
[ENA]
¢þ
>WENV183241109
OLRA01049331
[OLRA] human gut metagenome; faeces
68
142
+
Ala
TGC
[ENA]
¢þ
>WENV183271160
OLRV01072210
[OLRV] human gut metagenome; faeces
665
591
-
Ala
TGC
[ENA]
¢þ
>WENV183368420
OLXR01006771
[OLXR] human gut metagenome; feces
2066
1992
-
Ala
TGC
[ENA]
¢þ
>WENV183373813
OLXY01004786
[OLXY] human gut metagenome; feces
260
186
-
Ala
TGC
[ENA]
¢þ
>WENV183380928
OLYI01038603
[OLYI] human gut metagenome; feces
329
405
+
Ala
TGC
[ENA]
¢þ
>WENV183437567
OMCD01019112
[OMCD] human gut metagenome; feces
321
397
+
Ala
TGC
[ENA]
¢þ
>WENV183450200
OMCY01002043
[OMCY] human gut metagenome; feces
137
213
+
Ala
TGC
[ENA]
¢þ
>WENV183463724
OMDY01013110
[OMDY] human gut metagenome; feces
349
423
+
Ala
TGC
[ENA]
¢þ
>WENV183468156
OMEE01006737
[OMEE] human gut metagenome; feces
252
178
-
Ala
TGC
[ENA]
¢þ
>WENV183481065
OMFJ01030855
[OMFJ] human gut metagenome; feces
666
740
+
Ala
TGC
[ENA]
¢þ
>WENV183544873
OOAP01001503
[OOAP] human gut metagenome; human gut
1078
1004
-
Ala
TGC
[ENA]
¢þ
>WENV183595285
OODC01005808
[OODC] human gut metagenome; human gut
2914
2840
-
Ala
TGC
[ENA]
¢þ
>WENV183620938
OOFT01000168
[OOFT] marine metagenome; sea ice
3821
3747
-
Ala
TGC
[ENA]
¢þ
>WENV183639632
OQVI01030029
[OQVI] human gut metagenome; human gut
1304
1228
-
Ala
TGC
[ENA]
¢þ
>WENV170045940
CDYY01014238
[CDYY] gut metagenome; human stools
3273
3199
-
Ala
TGC
[ENA]
¢þ
>WENV170046084
CDYY01020696
[CDYY] gut metagenome; human stools
548
622
+
Ala
TGC
[ENA]
¢þ
>WENV170051263
CDZB01062067
[CDZB] gut metagenome; human stools
1147
1221
+
Ala
TGC
[ENA]
¢þ
>WENV170051386
CDZB01066854
[CDZB] gut metagenome; human stools
1181
1107
-
Ala
TGC
[ENA]
¢þ
>WENV170057337
CDZG01034328
[CDZG] gut metagenome; human stools
2321
2247
-
Ala
TGC
[ENA]
¢þ
>WENV170057476
CDZG01039972
[CDZG] gut metagenome; human stools
1156
1230
+
Ala
TGC
[ENA]
¢þ
>WENV170061702
CDZI01060377
[CDZI] gut metagenome; human stools
1023
949
-
Ala
TGC
[ENA]
¢þ
>WENV170065578
CDZM01007942
[CDZM] gut metagenome; human stools
2946
2872
-
Ala
TGC
[ENA]
¢þ
>WENV170065780
CDZM01017305
[CDZM] gut metagenome; human stools
1159
1233
+
Ala
TGC
[ENA]
¢þ
>WENV170066258
CDZN01005889
[CDZN] gut metagenome; human stools
3103
3029
-
Ala
TGC
[ENA]
¢þ
>WENV170088533
CEAE01009124
[CEAE] gut metagenome; human stools
1913
1987
+
Ala
TGC
[ENA]
¢þ
>WENV170186191
CEPA01024513
[CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
587
663
+
Ala
TGC
[ENA]
¢þ
>WENV170306111
CESJ01004764
[CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
817
893
+
Ala
TGC
[ENA]
¢þ
>WENV170306122
CESJ01006050
[CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
170
94
-
Ala
TGC
[ENA]
¢þ
>WENV170606320
FUWD010645300
[FUWD] metagenome; unknown
135
211
+
Ala
TGC
[ENA]
¢þ
>WENV170619661
FUWD013018713
[FUWD] metagenome; unknown
958
882
-
Ala
TGC
[ENA]
¢þ
>WENV170627775
FUWD013237149
[FUWD] metagenome; unknown
958
882
-
Ala
TGC
[ENA]
¢þ
>WENV170949056
MEHZ011346368
[MEHZ] marine metagenome; marine surface water
124
48
-
Ala
TGC
[ENA]
¢þ
>WENV171003109
NNBT01001174
[NNBT] plant metagenome; symbiotic tissue sample KVJ10
16271
16345
+
Ala
TGC
[ENA]
¢þ
>WENV171003140
NNBT01001856
[NNBT] plant metagenome; symbiotic tissue sample KVJ10
466
540
+
Ala
TGC
[ENA]
¢þ
>C181113129
CP025096
Bacteroidota
Spirosoma pollinicola Ha7 [CP025096]
8677287
8677361
+
Ala
TGC
-
¡û
>C181190991
CP030261
Bacteroidota
Flavobacterium fluviale HYN0086 [CP030261]
2143518
2143592
+
Ala
TGC
-
¡û
>C181191001
CP030261
Bacteroidota
Flavobacterium fluviale HYN0086 [CP030261]
4370801
4370727
-
Ala
TGC
-
¡û
>C181191003
CP030261
Bacteroidota
Flavobacterium fluviale HYN0086 [CP030261]
3744793
3744719
-
Ala
TGC
-
¡û
>C181191005
CP030261
Bacteroidota
Flavobacterium fluviale HYN0086 [CP030261]
3568363
3568289
-
Ala
TGC
-
¡û
>C181191021
CP030261
Bacteroidota
Flavobacterium fluviale HYN0086 [CP030261]
471849
471775
-
Ala
TGC
-
¡û
>C181191025
CP030261
Bacteroidota
Flavobacterium fluviale HYN0086 [CP030261]
24013
23939
-
Ala
TGC
-
¡û
>C191226430
LS999839
Bacteroidota
Pedobacter schmidteae eg [LS999839]
2058549
2058625
+
Ala
TGC
-
¡û
>C191226432
LS999839
Bacteroidota
Pedobacter schmidteae eg [LS999839]
2066022
2066098
+
Ala
TGC
-
¡û
>C191226458
LS999839
Bacteroidota
Pedobacter schmidteae eg [LS999839]
5920483
5920407
-
Ala
TGC
-
¡û
>C191226460
LS999839
Bacteroidota
Pedobacter schmidteae eg [LS999839]
5912848
5912772
-
Ala
TGC
-
¡û
>W09109617
ABUJ01000050
Bacteroidota
Pedobacter heparinus DSM 2366 [ABUJ]
608
684
+
Ala
TGC
[ENA]
¡û
>W1910184623
BJSW01000032
Bacteroidota
Flavobacterium psychrophilum NNS2-1804 [BJSW]
3175
3101
-
Ala
TGC
[ENA]
¡û
>W1910809272
MUGZ01000013
Bacteroidota
Flavobacterium johnsoniae UW101 ATCC 17061 [MUGZ]
1871
1945
+
Ala
TGC
[ENA]
¡û
>SRA1003562
SRR002327.33245
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
81
5
-
Ala
TGC
[SRA]
>SRA1015362
SRR023846.30183
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
104
30
-
Ala
TGC
[SRA]
>C151018490
CP007206
Bacteroidota
Flavobacterium psychrophilum FPG101 [CP007206]
593022
593098
+
Ala
TGC
[Ensembl]
¡û
>C151018497
CP007206
Bacteroidota
Flavobacterium psychrophilum FPG101 [CP007206]
1388698
1388774
+
Ala
TGC
[Ensembl]
¡û
>C151018509
CP007206
Bacteroidota
Flavobacterium psychrophilum FPG101 [CP007206]
2490016
2489940
-
Ala
TGC
[Ensembl]
¡û
>C151018519
CP007206
Bacteroidota
Flavobacterium psychrophilum FPG101 [CP007206]
2008591
2008515
-
Ala
TGC
[Ensembl]
¡û
>C151018524
CP007206
Bacteroidota
Flavobacterium psychrophilum FPG101 [CP007206]
1587244
1587168
-
Ala
TGC
[Ensembl]
¡û
>C151039049
CP008883
Bacteroidota
Flavobacterium psychrophilum v4-33 [CP008883]
2320465
2320389
-
Ala
TGC
[Ensembl]
¡û
>W1510650956
CVRP01000024
Bacteroidota
Dysgonomonas sp. BGC7 [CVRP]
3582
3508
-
Ala
TGC
[ENA]
¡û
>W1511311999
JPRK01000008
Bacteroidota
Flavobacterium hibernum DSM 12611 [JPRK]
40871
40797
-
Ala
TGC
[ENA]
¡û
>W1511357185
JRWB01000014
Bacteroidota
Flavobacterium psychrophilum CN [JRWB]
2340
2416
+
Ala
TGC
[ENA]
¡û
>W1511357193
JRWB01000021
Bacteroidota
Flavobacterium psychrophilum CN [JRWB]
10914
10990
+
Ala
TGC
[ENA]
¡û
>W1511357195
JRWB01000021
Bacteroidota
Flavobacterium psychrophilum CN [JRWB]
210626
210550
-
Ala
TGC
[ENA]
¡û
>W1511357203
JRWB01000023
Bacteroidota
Flavobacterium psychrophilum CN [JRWB]
596090
596014
-
Ala
TGC
[ENA]
¡û
>W1511357213
JRWB01000023
Bacteroidota
Flavobacterium psychrophilum CN [JRWB]
116793
116717
-
Ala
TGC
[ENA]
¡û
>W1511357316
JRWE01000022
Bacteroidota
Flavobacterium psychrophilum TN [JRWE]
9414
9490
+
Ala
TGC
[ENA]
¡û
>W1511357323
JRWE01000024
Bacteroidota
Flavobacterium psychrophilum TN [JRWE]
35147
35223
+
Ala
TGC
[ENA]
¡û
>W1511357329
JRWE01000047
Bacteroidota
Flavobacterium psychrophilum TN [JRWE]
42073
42149
+
Ala
TGC
[ENA]
¡û
>W1511357333
JRWE01000052
Bacteroidota
Flavobacterium psychrophilum TN [JRWE]
98221
98145
-
Ala
TGC
[ENA]
¡û
>W1511357342
JRWE01000103
Bacteroidota
Flavobacterium psychrophilum TN [JRWE]
6542
6466
-
Ala
TGC
[ENA]
¡û
>W1511357350
JRWE01000115
Bacteroidota
Flavobacterium psychrophilum TN [JRWE]
19256
19180
-
Ala
TGC
[ENA]
¡û
>W1511590225
LBGU01000004
Bacteroidota
Sphingobacterium sp. Ag1 [LBGU]
2098
2172
+
Ala
TGC
[ENA]
¡û
>C161024511
CP010278
Bacteroidota
Flavobacterium psychrophilum 3 [CP010278]
572425
572501
+
Ala
TGC
-
¡û
>C161024516
CP010278
Bacteroidota
Flavobacterium psychrophilum 3 [CP010278]
994687
994763
+
Ala
TGC
-
¡û
>C161024529
CP010278
Bacteroidota
Flavobacterium psychrophilum 3 [CP010278]
2444784
2444708
-
Ala
TGC
-
¡û
>C161024536
CP010278
Bacteroidota
Flavobacterium psychrophilum 3 [CP010278]
1671457
1671381
-
Ala
TGC
-
¡û
>C161024540
CP010278
Bacteroidota
Flavobacterium psychrophilum 3 [CP010278]
1535694
1535618
-
Ala
TGC
-
¡û
>C161024546
CP010278
Bacteroidota
Flavobacterium psychrophilum 3 [CP010278]
1193360
1193284
-
Ala
TGC
-
¡û
>C161049127
CP012996
Bacteroidota
Pedobacter sp. PACM 27299 PAMC 27299 [CP012996]
849090
849164
+
Ala
TGC
[Ensembl]
¡û
>C161049129
CP012996
Bacteroidota
Pedobacter sp. PACM 27299 PAMC 27299 [CP012996]
857430
857504
+
Ala
TGC
[Ensembl]
¡û
>C161049149
CP012996
Bacteroidota
Pedobacter sp. PACM 27299 PAMC 27299 [CP012996]
6075238
6075164
-
Ala
TGC
[Ensembl]
¡û
>C161049151
CP012996
Bacteroidota
Pedobacter sp. PACM 27299 PAMC 27299 [CP012996]
6068350
6068276
-
Ala
TGC
[Ensembl]
¡û
>C161049161
CP012996
Bacteroidota
Pedobacter sp. PACM 27299 PAMC 27299 [CP012996]
5251312
5251238
-
Ala
TGC
[Ensembl]
¡û
>C161049163
CP012996
Bacteroidota
Pedobacter sp. PACM 27299 PAMC 27299 [CP012996]
5243811
5243737
-
Ala
TGC
[Ensembl]
¡û
>C161049165
CP012996
Bacteroidota
Pedobacter sp. PACM 27299 PAMC 27299 [CP012996]
5219423
5219349
-
Ala
TGC
[Ensembl]
¡û
>W1610052955
BBII01000104
Bacteroidota
Phocaeicola coprophilus JCM 13817 [BBII]
2176
2252
+
Ala
TGC
[ENA]
¡û
>W1610053016
BBIJ01000104
Bacteroidota
Phocaeicola coprophilus DSM 18228 = JCM 13818 [BBIJ]
2284
2360
+
Ala
TGC
[ENA]
¡û
>W1610612142
LGEL01000156
Bacteroidota
Pedobacter panaciterrae [LGEL]
2495
2571
+
Ala
TGC
[ENA]
¡û
>W1610729251
LMHW01000010
Bacteroidota
Flavobacterium sp. Root186 [LMHW]
550014
550090
+
Ala
TGC
[ENA]
¡û
>W1610731228
LMJL01000009
Bacteroidota
Flavobacterium sp. Root935 [LMJL]
2027
2101
+
Ala
TGC
[ENA]
¡û
>W1610749668
LNAL01000001
Bacteroidota
Solirubrum puertoriconensis MC1A [LNAL]
829
903
+
Ala
TGC
[ENA]
¡û
>W1610867567
LQXS01000030
Bacteroidota
Sphingobacterium sp. CFCC 11742 [LQXS]
27
103
+
Ala
TGC
[ENA]
¡û
>W1610867568
LQXS01000032
Bacteroidota
Sphingobacterium sp. CFCC 11742 [LQXS]
264
188
-
Ala
TGC
[ENA]
¡û
>W1610950011
LVEO01000032
Bacteroidota
Flavobacterium glycines [LVEO]
3374
3298
-
Ala
TGC
[ENA]
¡û
>W1610957715
LVJE01000012
Bacteroidota
Flavobacterium fryxellicola [LVJE]
2544
2618
+
Ala
TGC
[ENA]
¡û
>W1710049333
BBII01000104
Bacteroidota
Phocaeicola coprophilus JCM 13817 [BBII]
2176
2252
+
Ala
TGC
[ENA]
¡û
>W1710049394
BBIJ01000104
Bacteroidota
Phocaeicola coprophilus DSM 18228 = JCM 13818 [BBIJ]
2284
2360
+
Ala
TGC
[ENA]
¡û
>W1710519228
FNEO01000014
Bacteroidota
Flavobacterium glycines [FNEO]
1923
1999
+
Ala
TGC
[ENA]
¡û
>W1710543147
FNZR01000023
Bacteroidota
Parapedobacter koreensis [FNZR]
2206
2282
+
Ala
TGC
[ENA]
¡û
>W1710557962
FOLL01000040
Bacteroidota
Parapedobacter composti [FOLL]
3345
3271
-
Ala
TGC
[ENA]
¡û
>W1710582601
FQUC01000035
Bacteroidota
Dysgonomonas macrotermitis [FQUC]
3372
3296
-
Ala
TGC
[ENA]
¡û
>W1710606385
FWXT01000009
Bacteroidota
Pedobacter africanus [FWXT]
3385
3309
-
Ala
TGC
[ENA]
¡û
>W1710699616
LBCW01000130
Bacteroidota
Bacteroidales bacterium Barb6XT [LBCW]
5702
5628
-
Ala
TGC
[ENA]
¡û
>W1710733648
LGEL01000156
Bacteroidota
Pedobacter panaciterrae [LGEL]
2495
2571
+
Ala
TGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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