This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.190275 (35 seq.)
>WENV180336038
OBLG01000541
[OBLG] human gut metagenome; human gut
127
203
+
His
GTG
[ENA]
¡û
>WENV180578303
OCMB01065442
[OCMB] human gut metagenome; human gut
75
1
-
His
GTG
[ENA]
¡û
>WENV180972001
ODUU01168711
[ODUU] human metagenome; G_DNA_Stool
363
287
-
His
GTG
[ENA]
¡û
>WENV181753757
OGQR01002184
[OGQR] human gut metagenome; faeces
403
479
+
His
GTG
[ENA]
¡û
>WENV181769667
OGRA01068521
[OGRA] human gut metagenome; faeces
51
127
+
His
GTG
[ENA]
¡û
>WENV182038339
OHDE01006277
[OHDE] human gut metagenome; feces
9
85
+
His
GTG
[ENA]
¡û
>WENV182246966
OHSM01013867
[OHSM] human gut metagenome; feces
1308
1232
-
His
GTG
[ENA]
¡û
>WENV182415837
OIGD01000157
[OIGD] human gut metagenome; human gut
4
80
+
His
GTG
[ENA]
¡û
>WENV182417700
OIGD01051991
[OIGD] human gut metagenome; human gut
4
80
+
His
GTG
[ENA]
¡û
>WENV182524063
OIWT01000027
[OIWT] human gut metagenome; faeces
88719
88795
+
His
GTG
[ENA]
¡û
>WENV182527308
OIWU01000163
[OIWU] human gut metagenome; faeces
70085
70161
+
His
GTG
[ENA]
¡û
>WENV182639464
OJLA01076265
[OJLA] metagenome; faeces
740
664
-
His
GTG
[ENA]
¡û
>WENV182650968
OJMH01000485
[OJMH] human gut metagenome; feces
793
869
+
His
GTG
[ENA]
¡û
>WENV182659706
OJML01030662
[OJML] human gut metagenome; feces
210
134
-
His
GTG
[ENA]
¡û
>WENV182687867
OJOA01020093
[OJOA] human gut metagenome; human gut
893
817
-
His
GTG
[ENA]
¡û
>WENV182972175
OKXI01016217
[OKXI] human gut metagenome; human gut
995
1071
+
His
GTG
[ENA]
¡û
>WENV183039615
OLGB01010494
[OLGB] human gut metagenome; faeces
185
261
+
His
GTG
[ENA]
¡û
>WENV183040748
OLGD01000136
[OLGD] human gut metagenome; faeces
145338
145262
-
His
GTG
[ENA]
¡û
>WENV183044535
OLGE01001399
[OLGE] human gut metagenome; faeces
12574
12650
+
His
GTG
[ENA]
¡û
>WENV183076287
OLIW01002558
[OLIW] human gut metagenome; feces
3394
3470
+
His
GTG
[ENA]
¡û
>WENV183124529
OLNW01019345
[OLNW] human gut metagenome; faeces
2461
2537
+
His
GTG
[ENA]
¡û
>WENV183190856
OLPR01002266
[OLPR] human gut metagenome; faeces
12248
12172
-
His
GTG
[ENA]
¡û
>WENV183191613
OLPR01017774
[OLPR] human gut metagenome; faeces
1856
1932
+
His
GTG
[ENA]
¡û
>WENV183324845
OLVY01068841
[OLVY] human gut metagenome; feces
209
285
+
His
GTG
[ENA]
¡û
>WENV183380897
OLYI01029357
[OLYI] human gut metagenome; feces
157
233
+
His
GTG
[ENA]
¡û
>WENV183479308
OMFF01010679
[OMFF] human gut metagenome; feces
774
850
+
His
GTG
[ENA]
¡û
>WENV183579997
OOCM01010755
[OOCM] human gut metagenome; human gut
2538
2614
+
His
GTG
[ENA]
¡û
>WENV183641922
OQVL01105826
[OQVL] human gut metagenome; human gut
731
655
-
His
GTG
[ENA]
¡û
>WENV170026154
CDTW01020712
[CDTW] gut metagenome; human stools
3666
3590
-
His
GTG
[ENA]
¡û
>WENV170050354
CDZB01023403
[CDZB] gut metagenome; human stools
22699
22623
-
His
GTG
[ENA]
¡û
>WENV170053266
CDZD01018313
[CDZD] gut metagenome; human stools
10527
10451
-
His
GTG
[ENA]
¡û
>WENV170084604
CEAB01022577
[CEAB] gut metagenome; human stools
126
202
+
His
GTG
[ENA]
¡û
>WENV170101268
CEAR01026662
[CEAR] gut metagenome; human stools
19261
19337
+
His
GTG
[ENA]
¡û
>WENV170108240
CECA01019107
[CECA] gut metagenome; human stools
18100
18024
-
His
GTG
[ENA]
¡û
>W2110101811
CAJFOS010000016
Bacillota
Candidatus Allochristensenella caecavium [CAJFOS]
133252
133328
+
His
GTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK