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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.190971 (8 seq.)
>WENV180243585
OBDJ01036005
[OBDJ] human gut metagenome; human gut
137
212
+
Glu
TTC
[ENA]
¡û
>WENV180412560
OBVA01003557
[OBVA] human gut metagenome; faeces
2521
2446
-
Glu
TTC
[ENA]
¡û
>WENV180412715
OBVA01008615
[OBVA] human gut metagenome; faeces
977
902
-
Glu
TTC
[ENA]
¡û
>WENV182666800
OJNH01072673
[OJNH] human gut metagenome; feces
105
182
+
Glu
TTC
[ENA]
¡û
>WENV183097930
OLNE01019966
[OLNE] human gut metagenome; faeces
1255
1330
+
Glu
TTC
[ENA]
¡û
>WENV183186183
OLPO01000122
[OLPO] human gut metagenome; faeces
19917
19842
-
Glu
TTC
[ENA]
¡û
>WENV183186497
OLPO01000604
[OLPO] human gut metagenome; faeces
20317
20239
-
Glu
TTC
[ENA]
¡û
>WENV183253573
OLRJ01000040
[OLRJ] human gut metagenome; faeces
77696
77774
+
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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