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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.193275 (183 seq.)
>W1710799951
LJVG01000132
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
225
301
+
Ile
GAT
[ENA]
¡û
>W1710799952
LJVG01000135
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
362
286
-
Ile
GAT
[ENA]
¡û
>W1711055136
LRUI01000047
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
145
221
+
Ile
GAT
[ENA]
¡û
>W1711081192
LSRT01000370
Gammaproteobacteria
Marinobacter sp. T13-3 [LSRT]
2601
2525
-
Ile
GAT
[ENA]
¡û
>W1711228035
LXWE01000015
Gammaproteobacteria
Alteromonadaceae bacterium XY-R5 [LXWE]
3502
3426
-
Ile
GAT
[ENA]
¡û
>W1711356875
MDGT01000001
Gammaproteobacteria
Idiomarina sp. MD25a [MDGT]
194486
194410
-
Ile
GAT
[ENA]
¡û
>W1711624699
MPHL01000062
Gammaproteobacteria
Colwellia sp. UCD-KL20 [MPHL]
329
405
+
Ile
GAT
[ENA]
¡û
>W1711947540
NBOD01000019
Gammaproteobacteria
Cognaticolwellia aestuarii [NBOD]
1777
1853
+
Ile
GAT
[ENA]
¡û
>W1711947605
NBOE01000027
Gammaproteobacteria
Colwellia polaris [NBOE]
844
768
-
Ile
GAT
[ENA]
¡û
>W1711947677
NBOF01000013
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
723
647
-
Ile
GAT
[ENA]
¡û
>W1711947680
NBOF01000014
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
295
371
+
Ile
GAT
[ENA]
¡û
>W1711947682
NBOF01000015
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
295
371
+
Ile
GAT
[ENA]
¡û
>W1711947747
NBOG01000029
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
948
872
-
Ile
GAT
[ENA]
¡û
>W1711947749
NBOG01000031
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
380
456
+
Ile
GAT
[ENA]
¡û
>W1712106985
NIWW01000016
Gammaproteobacteria
Lacimicrobium sp. SS2-24 [NIWW]
3586
3510
-
Ile
GAT
[ENA]
¡û
>C171066058
CP017689
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [CP017689]
229489
229565
+
Ile
GAT
-
¡û
>C171066101
CP017689
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [CP017689]
3300796
3300720
-
Ile
GAT
-
¡û
>C171066106
CP017689
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [CP017689]
2733941
2733865
-
Ile
GAT
-
¡û
>C171108348
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
1465727
1465803
+
Ile
GAT
-
¡û
>C171108355
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
2383386
2383462
+
Ile
GAT
-
¡û
>C171108357
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
2491087
2491163
+
Ile
GAT
-
¡û
>C171108368
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
3253826
3253902
+
Ile
GAT
-
¡û
>C171108371
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
3513014
3513090
+
Ile
GAT
-
¡û
>C171108400
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
1876721
1876645
-
Ile
GAT
-
¡û
>W131164573
ARAW01000036
Gammaproteobacteria
Fangia hongkongensis DSM 21703 [ARAW]
1
77
+
Ile
GAT
[ENA]
¡û
>C006772
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
36547
36623
+
Ile
GAT
[Ensembl]
¡û
>C006785
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
1658065
1658141
+
Ile
GAT
[Ensembl]
¡û
>WENV180650317
OCSY01006566
[OCSY] marine metagenome; 30 L Plastic container
425
349
-
Ile
GAT
[ENA]
¢þ
>W141067268
ARZY01000069
Gammaproteobacteria
Catenovulum agarivorans DS-2 [ARZY]
2075
2151
+
Ile
GAT
[ENA]
¡û
>W141067272
ARZY01000136
Gammaproteobacteria
Catenovulum agarivorans DS-2 [ARZY]
189
113
-
Ile
GAT
[ENA]
¡û
>WENV181234122
OFET01005222
[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
80
4
-
Ile
GAT
[ENA]
¢þ
>WENV181319609
OFKE01003735
[OFKE] marine metagenome; seawater
88
12
-
Ile
GAT
[ENA]
¢þ
>WENV182542113
OJAV01003437
[OJAV] seawater metagenome; Sea water
2495
2419
-
Ile
GAT
[ENA]
¢þ
>WENV182542955
OJAZ01010419
[OJAZ] seawater metagenome; Sea water
296
372
+
Ile
GAT
[ENA]
¢þ
>WENV182544646
OJBI01000825
[OJBI] seawater metagenome; Sea water
1477
1401
-
Ile
GAT
[ENA]
¢þ
>WENV182545191
OJBM01006775
[OJBM] seawater metagenome; Sea water
569
493
-
Ile
GAT
[ENA]
¢þ
>WENV182547791
OJBT01005329
[OJBT] seawater metagenome; Sea water
1
77
+
Ile
GAT
[ENA]
¢þ
>WENV182555109
OJCY01002482
[OJCY] seawater metagenome; Sea water
87
163
+
Ile
GAT
[ENA]
¢þ
>WENV182556892
OJDH01001029
[OJDH] seawater metagenome; Sea water
151
227
+
Ile
GAT
[ENA]
¢þ
>WENV182557748
OJDK01006096
[OJDK] seawater metagenome; Sea water
87
163
+
Ile
GAT
[ENA]
¢þ
>WENV182560033
OJDR01000480
[OJDR] seawater metagenome; Sea water
1474
1398
-
Ile
GAT
[ENA]
¢þ
>WENV182560210
OJDT01008832
[OJDT] seawater metagenome; Sea water
179
255
+
Ile
GAT
[ENA]
¢þ
>WENV182561173
OJDV01011200
[OJDV] seawater metagenome; Sea water
1132
1056
-
Ile
GAT
[ENA]
¢þ
>WENV182566284
OJEJ01007244
[OJEJ] seawater metagenome; Sea water
1072
996
-
Ile
GAT
[ENA]
¢þ
>WENV182567185
OJEN01010072
[OJEN] seawater metagenome; Sea water
261
185
-
Ile
GAT
[ENA]
¢þ
>WENV182568213
OJER01004485
[OJER] seawater metagenome; Sea water
597
521
-
Ile
GAT
[ENA]
¢þ
>WENV182568711
OJEW01001114
[OJEW] seawater metagenome; Sea water
2510
2434
-
Ile
GAT
[ENA]
¢þ
>WENV182577745
OJGH01006840
[OJGH] seawater metagenome; Sea water
1068
992
-
Ile
GAT
[ENA]
¢þ
>WENV182578944
OJGP01028127
[OJGP] seawater metagenome; Sea water
1
77
+
Ile
GAT
[ENA]
¢þ
>WENV182579753
OJGT01000454
[OJGT] seawater metagenome; Sea water
2544
2468
-
Ile
GAT
[ENA]
¢þ
>WENV182586989
OJHK01026473
[OJHK] seawater metagenome; Sea water
620
544
-
Ile
GAT
[ENA]
¢þ
>WENV182587422
OJHM01005285
[OJHM] seawater metagenome; Sea water
373
449
+
Ile
GAT
[ENA]
¢þ
>WENV182594345
OJIV01004683
[OJIV] seawater metagenome; Sea water
2627
2551
-
Ile
GAT
[ENA]
¢þ
>WENV183053750
OLGQ01002887
[OLGQ] seawater metagenome; Sea water
384
308
-
Ile
GAT
[ENA]
¢þ
>WENV183055729
OLHF01000391
[OLHF] seawater metagenome; Sea water
2870
2794
-
Ile
GAT
[ENA]
¢þ
>WENV183056273
OLHI01004103
[OLHI] seawater metagenome; Sea water
395
471
+
Ile
GAT
[ENA]
¢þ
>WENV183057103
OLHK01003306
[OLHK] seawater metagenome; Sea water
507
583
+
Ile
GAT
[ENA]
¢þ
>WENV183058304
OLHP01004548
[OLHP] seawater metagenome; Sea water
366
442
+
Ile
GAT
[ENA]
¢þ
>WENV183062377
OLID01005616
[OLID] seawater metagenome; Sea water
172
248
+
Ile
GAT
[ENA]
¢þ
>WENV183065137
OLII01032108
[OLII] seawater metagenome; Sea water
183
259
+
Ile
GAT
[ENA]
¢þ
>WENV183719888
PDWJ01022319
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
3245
3169
-
Ile
GAT
[ENA]
¢þ
>WENV170024823
BCQL01136860
[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
392
316
-
Ile
GAT
[ENA]
¢þ
>WENV170194434
CEPJ01033399
[CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
109
185
+
Ile
GAT
[ENA]
¢þ
>WENV170444823
CEUY01005253
[CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
110
186
+
Ile
GAT
[ENA]
¢þ
>WENV170655464
JTFN01034748
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
168
244
+
Ile
GAT
[ENA]
¢þ
>WENV170655875
JTFN01089436
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
7
83
+
Ile
GAT
[ENA]
¢þ
>WENV170656019
JTFN01115863
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
168
244
+
Ile
GAT
[ENA]
¢þ
>WENV170656775
JTFO01042645
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
168
244
+
Ile
GAT
[ENA]
¢þ
>WENV170657328
JTFO01126797
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
81
5
-
Ile
GAT
[ENA]
¢þ
>WENV170657340
JTFO01129300
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
7
83
+
Ile
GAT
[ENA]
¢þ
>WENV170658743
JTFP01199175
[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
205
281
+
Ile
GAT
[ENA]
¢þ
>WENV170704770
LLEM01009714
[LLEM] bioreactor metagenome; day64 10degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
107
31
-
Ile
GAT
[ENA]
¢þ
>WENV170704819
LLEN01000607
[LLEN] bioreactor metagenome; day86 10degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
259
335
+
Ile
GAT
[ENA]
¢þ
>WENV170752977
LUMJ01009228
[LUMJ] marine metagenome; Red Sea water column Station 22 - depth 500m
283
359
+
Ile
GAT
[ENA]
¢þ
>WENV170779839
LZQR01001647
[LZQR] oil field metagenome; sample BH-FW-24 from oil reservoir
2583
2507
-
Ile
GAT
[ENA]
¢þ
>WENV170779971
MAAA01004884
[MAAA] seawater metagenome; sample BD02T6 sea water enriched with oil for 6 days
1305
1229
-
Ile
GAT
[ENA]
¢þ
>WENV170780676
MAAB01013041
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
1045
969
-
Ile
GAT
[ENA]
¢þ
>C181054053
CP021781
Gammaproteobacteria
Francisella adeliensis FDC440 [CP021781]
46890
46966
+
Ile
GAT
-
¡û
>C181054076
CP021781
Gammaproteobacteria
Francisella adeliensis FDC440 [CP021781]
1680249
1680173
-
Ile
GAT
-
¡û
>C181054086
CP021781
Gammaproteobacteria
Francisella adeliensis FDC440 [CP021781]
1258190
1258114
-
Ile
GAT
-
¡û
>C181113433
CP025120
Gammaproteobacteria
Kangiella profundi FT102 [CP025120]
375438
375514
+
Ile
GAT
-
¡û
>C181113441
CP025120
Gammaproteobacteria
Kangiella profundi FT102 [CP025120]
1104261
1104337
+
Ile
GAT
-
¡û
>C181136184
CP026604
Gammaproteobacteria
Saccharobesus litoralis CCB-QB4 [CP026604]
3247888
3247964
+
Ile
GAT
-
¡û
>C181136198
CP026604
Gammaproteobacteria
Saccharobesus litoralis CCB-QB4 [CP026604]
5312622
5312546
-
Ile
GAT
-
¡û
>C181146707
CP027188
Gammaproteobacteria
Idiomarina sp. OT37-5b [CP027188]
2839565
2839489
-
Ile
GAT
-
¡û
>C181146711
CP027188
Gammaproteobacteria
Idiomarina sp. OT37-5b [CP027188]
2521789
2521713
-
Ile
GAT
-
¡û
>C181146714
CP027188
Gammaproteobacteria
Idiomarina sp. OT37-5b [CP027188]
2122135
2122059
-
Ile
GAT
-
¡û
>C181146717
CP027188
Gammaproteobacteria
Idiomarina sp. OT37-5b [CP027188]
1991177
1991101
-
Ile
GAT
-
¡û
>C191130461
CP034759
Gammaproteobacteria
Litorilituus sediminis JCM 17549 [CP034759]
2914799
2914875
+
Ile
GAT
-
¡û
>C191130476
CP034759
Gammaproteobacteria
Litorilituus sediminis JCM 17549 [CP034759]
2535236
2535160
-
Ile
GAT
-
¡û
>C191160542
CP038493
Gammaproteobacteria
Thalassotalea sp. HSM 43 [CP038493]
2005059
2005135
+
Ile
GAT
-
¡û
>C191160546
CP038493
Gammaproteobacteria
Thalassotalea sp. HSM 43 [CP038493]
2347959
2348035
+
Ile
GAT
-
¡û
>C191160558
CP038493
Gammaproteobacteria
Thalassotalea sp. HSM 43 [CP038493]
3039317
3039393
+
Ile
GAT
-
¡û
>W09109234
ABUB01000009
Gammaproteobacteria
Kangiella koreensis DSM 16069 [ABUB]
1965
2041
+
Ile
GAT
[ENA]
¡û
>W141802177
JPER01000013
Gammaproteobacteria
Pseudidiomarina salinarum [JPER]
3377
3301
-
Ile
GAT
[ENA]
¡û
>W1910584196
JXSY01000041
Gammaproteobacteria
Bowmanella sp. JS7-9 [JXSY]
3284
3208
-
Ile
GAT
[ENA]
¡û
>W1911584709
PIPI01000015
Gammaproteobacteria
Aliidiomarina haloalkalitolerans AK5 [PIPI]
1476
1552
+
Ile
GAT
[ENA]
¡û
>W1911584759
PIPJ01000031
Gammaproteobacteria
Aliidiomarina iranensis GBPy7 [PIPJ]
212
288
+
Ile
GAT
[ENA]
¡û
>W1911584761
PIPJ01000034
Gammaproteobacteria
Aliidiomarina iranensis GBPy7 [PIPJ]
696
620
-
Ile
GAT
[ENA]
¡û
>W1911584763
PIPJ01000036
Gammaproteobacteria
Aliidiomarina iranensis GBPy7 [PIPJ]
136
212
+
Ile
GAT
[ENA]
¡û
>W1911584817
PIPK01000043
Gammaproteobacteria
Aliidiomarina maris CF12-14 [PIPK]
640
564
-
Ile
GAT
[ENA]
¡û
>W1911584968
PIPN01000008
Gammaproteobacteria
Aliidiomarina sedimenti GBSy1 [PIPN]
3376
3300
-
Ile
GAT
[ENA]
¡û
>W1911584969
PIPN01000010
Gammaproteobacteria
Aliidiomarina sedimenti GBSy1 [PIPN]
621
545
-
Ile
GAT
[ENA]
¡û
>W1911585020
PIPO01000010
Gammaproteobacteria
Aliidiomarina soli Y4G10-17 [PIPO]
815
739
-
Ile
GAT
[ENA]
¡û
>W1911585022
PIPO01000011
Gammaproteobacteria
Aliidiomarina soli Y4G10-17 [PIPO]
862
786
-
Ile
GAT
[ENA]
¡û
>W1911585072
PIPP01000012
Gammaproteobacteria
Aliidiomarina shirensis AIS [PIPP]
681
605
-
Ile
GAT
[ENA]
¡û
>W1911585074
PIPP01000013
Gammaproteobacteria
Aliidiomarina shirensis AIS [PIPP]
553
477
-
Ile
GAT
[ENA]
¡û
>W1911585076
PIPP01000015
Gammaproteobacteria
Aliidiomarina shirensis AIS [PIPP]
1
77
+
Ile
GAT
[ENA]
¡û
>W1911585222
PIPS01000007
Gammaproteobacteria
Idiomarina aquatica SN-14 [PIPS]
1765
1841
+
Ile
GAT
[ENA]
¡û
>W1911585467
PIPX01000006
Gammaproteobacteria
Pseudidiomarina homiensis PO-M2 [PIPX]
1693
1769
+
Ile
GAT
[ENA]
¡û
>W1911585766
PIQD01000005
Gammaproteobacteria
Pseudidiomarina salinarum ISL-52 [PIQD]
1780
1856
+
Ile
GAT
[ENA]
¡û
>W1911586013
PIQJ01000005
Gammaproteobacteria
Pseudidiomarina tainanensis PIN1 [PIQJ]
3397
3321
-
Ile
GAT
[ENA]
¡û
>W1911687750
QLIQ01000178
Gammaproteobacteria
Cysteiniphilum litorale DSM 101832 [QLIQ]
297
373
+
Ile
GAT
[ENA]
¡û
>W1911687752
QLIQ01000179
Gammaproteobacteria
Cysteiniphilum litorale DSM 101832 [QLIQ]
298
374
+
Ile
GAT
[ENA]
¡û
>W1911687848
QLIT01000111
Gammaproteobacteria
Facilibium subflavum SYSU SYW-5 [QLIT]
1865
1941
+
Ile
GAT
[ENA]
¡û
>W1911687902
QLIU01000060
Gammaproteobacteria
Cysteiniphilum halobium SYSU SYW-6 [QLIU]
182
258
+
Ile
GAT
[ENA]
¡û
>W1911687904
QLIU01000061
Gammaproteobacteria
Cysteiniphilum halobium SYSU SYW-6 [QLIU]
224
300
+
Ile
GAT
[ENA]
¡û
>W1911717889
QQTF01000004
Gammaproteobacteria
Kangiella sp. HD9-110m-PIT-SAG06 [QQTF]
74957
74881
-
Ile
GAT
[ENA]
¡û
>W1911717914
QQTG01000031
Gammaproteobacteria
Kangiella sp. HD9-110m-PIT-SAG07 [QQTG]
135127
135051
-
Ile
GAT
[ENA]
¡û
>W1810155095
PJAI01000059
Gammaproteobacteria
Colwellia echini A3T [PJAI]
288
212
-
Ile
GAT
[ENA]
¡û
>W1810155120
PJAI01000099
Gammaproteobacteria
Colwellia echini A3T [PJAI]
526
450
-
Ile
GAT
[ENA]
¡û
>W1810155527
PJAU01000020
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
332
256
-
Ile
GAT
[ENA]
¡û
>W1810425688
PYVF01000004
Gammaproteobacteria
Pseudidiomarina aestuarii A12-4 [PYVF]
12389
12465
+
Ile
GAT
[ENA]
¡û
>W1810425715
PYVG01000008
Gammaproteobacteria
Pseudidiomarina aestuarii A9-4 [PYVG]
14025
13949
-
Ile
GAT
[ENA]
¡û
>W1810425803
PYVM01000059
Gammaproteobacteria
Pseudidiomarina aestuarii Z-D7-3 [PYVM]
500
576
+
Ile
GAT
[ENA]
¡û
>W1810425834
PYVN01000095
Gammaproteobacteria
Pseudidiomarina aestuarii Z-D3-2 [PYVN]
482
406
-
Ile
GAT
[ENA]
¡û
>W1810425916
PYVR01000027
Gammaproteobacteria
Pseudidiomarina aestuarii Z-E7-4 [PYVR]
8116
8040
-
Ile
GAT
[ENA]
¡û
>W1810425923
PYVS01000020
Gammaproteobacteria
Pseudidiomarina aestuarii Z-E1-2 [PYVS]
2329
2253
-
Ile
GAT
[ENA]
¡û
>W1810609123
QGTT01000035
Gammaproteobacteria
Pseudidiomarina maritima 125B1 [QGTT]
1695
1771
+
Ile
GAT
[ENA]
¡û
>W1810694627
QLMD01000031
Gammaproteobacteria
Aliidiomarina maris CGMCC 1.15366 [QLMD]
1915
1991
+
Ile
GAT
[ENA]
¡û
>W1810705117
QMIL01000012
Gammaproteobacteria
Aliidiomarina celeris F3105 [QMIL]
221
297
+
Ile
GAT
[ENA]
¡û
>W1810705119
QMIL01000015
Gammaproteobacteria
Aliidiomarina celeris F3105 [QMIL]
279
355
+
Ile
GAT
[ENA]
¡û
>W1810705121
QMIL01000017
Gammaproteobacteria
Aliidiomarina celeris F3105 [QMIL]
35
111
+
Ile
GAT
[ENA]
¡û
>W1810706753
QMKJ01000007
Gammaproteobacteria
Aliidiomarina sp. B3213 [QMKJ]
204
280
+
Ile
GAT
[ENA]
¡û
>W1810706756
QMKJ01000011
Gammaproteobacteria
Aliidiomarina sp. B3213 [QMKJ]
167
243
+
Ile
GAT
[ENA]
¡û
>W1810706758
QMKJ01000032
Gammaproteobacteria
Aliidiomarina sp. B3213 [QMKJ]
202
126
-
Ile
GAT
[ENA]
¡û
>W1810735877
QOLD01000041
Gammaproteobacteria
Candidatus Colwellia aromaticivorans Bin11-node4 [QOLD]
849
773
-
Ile
GAT
[ENA]
¡û
>W1810735914
QOLD01000083
Gammaproteobacteria
Candidatus Colwellia aromaticivorans Bin11-node4 [QOLD]
828
752
-
Ile
GAT
[ENA]
¡û
>W1810886995
QUOT01000001
Gammaproteobacteria
Thalassotalea euphylliae H3 [QUOT]
3463675
3463751
+
Ile
GAT
[ENA]
¡û
>W1810886997
QUOT01000001
Gammaproteobacteria
Thalassotalea euphylliae H3 [QUOT]
3719778
3719854
+
Ile
GAT
[ENA]
¡û
>W1810887004
QUOT01000001
Gammaproteobacteria
Thalassotalea euphylliae H3 [QUOT]
4159610
4159686
+
Ile
GAT
[ENA]
¡û
>W1810887011
QUOT01000001
Gammaproteobacteria
Thalassotalea euphylliae H3 [QUOT]
2351610
2351534
-
Ile
GAT
[ENA]
¡û
>W1810887013
QUOT01000001
Gammaproteobacteria
Thalassotalea euphylliae H3 [QUOT]
2246301
2246225
-
Ile
GAT
[ENA]
¡û
>W1810887015
QUOT01000001
Gammaproteobacteria
Thalassotalea euphylliae H3 [QUOT]
2240465
2240389
-
Ile
GAT
[ENA]
¡û
>W1810887146
QUOV01000001
Gammaproteobacteria
Thalassotalea euphylliae H2 [QUOV]
199273
199349
+
Ile
GAT
[ENA]
¡û
>W1810887148
QUOV01000001
Gammaproteobacteria
Thalassotalea euphylliae H2 [QUOV]
290025
290101
+
Ile
GAT
[ENA]
¡û
>W1810887187
QUOV01000001
Gammaproteobacteria
Thalassotalea euphylliae H2 [QUOV]
3441378
3441302
-
Ile
GAT
[ENA]
¡û
>W1810887190
QUOV01000001
Gammaproteobacteria
Thalassotalea euphylliae H2 [QUOV]
3203347
3203271
-
Ile
GAT
[ENA]
¡û
>W1810887197
QUOV01000001
Gammaproteobacteria
Thalassotalea euphylliae H2 [QUOV]
2750492
2750416
-
Ile
GAT
[ENA]
¡û
>C151074720
CP010975
Gammaproteobacteria
Kangiella geojedonensis YCS-5 [CP010975]
2165491
2165415
-
Ile
GAT
[Ensembl]
¡û
>C151074729
CP010975
Gammaproteobacteria
Kangiella geojedonensis YCS-5 [CP010975]
1385190
1385114
-
Ile
GAT
[Ensembl]
¡û
>W1510741101
CYHB01000014
Gammaproteobacteria
Pseudidiomarina woesei DSM 27808 [CYHB]
77
1
-
Ile
GAT
[ENA]
¡û
>W1511322745
JQDZ01000120
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
724
648
-
Ile
GAT
[ENA]
¡û
>W1511322749
JQDZ01000126
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
967
891
-
Ile
GAT
[ENA]
¡û
>W1511322751
JQDZ01000127
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
757
681
-
Ile
GAT
[ENA]
¡û
>W1511322879
JQEC01000018
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
407
331
-
Ile
GAT
[ENA]
¡û
>W1511533749
JYNI01000036
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
229
305
+
Ile
GAT
[ENA]
¡û
>W1511533855
JYNJ01000221
Gammaproteobacteria
Thalassomonas viridans XOM25 [JYNJ]
198
274
+
Ile
GAT
[ENA]
¡û
>W1511533857
JYNJ01000222
Gammaproteobacteria
Thalassomonas viridans XOM25 [JYNJ]
152
228
+
Ile
GAT
[ENA]
¡û
>C161049635
CP013021
Gammaproteobacteria
Agarivorans gilvus WH0801 [CP013021]
2765842
2765918
+
Ile
GAT
-
¡û
>C161049641
CP013021
Gammaproteobacteria
Agarivorans gilvus WH0801 [CP013021]
3215200
3215276
+
Ile
GAT
-
¡û
>C161052217
CP013145
Gammaproteobacteria
Colwellia sp. MT41 [CP013145]
36584
36660
+
Ile
GAT
[Ensembl]
¡û
>C161052228
CP013145
Gammaproteobacteria
Colwellia sp. MT41 [CP013145]
1468182
1468258
+
Ile
GAT
[Ensembl]
¡û
>C161058095
CP013650
Gammaproteobacteria
Lacimicrobium alkaliphilum YelD216 [CP013650]
529455
529531
+
Ile
GAT
[Ensembl]
¡û
>C161058128
CP013650
Gammaproteobacteria
Lacimicrobium alkaliphilum YelD216 [CP013650]
4228514
4228438
-
Ile
GAT
[Ensembl]
¡û
>C161058132
CP013650
Gammaproteobacteria
Lacimicrobium alkaliphilum YelD216 [CP013650]
2945932
2945856
-
Ile
GAT
[Ensembl]
¡û
>C161058134
CP013650
Gammaproteobacteria
Lacimicrobium alkaliphilum YelD216 [CP013650]
2746506
2746430
-
Ile
GAT
[Ensembl]
¡û
>C161107768
LN899469
Gammaproteobacteria
Idiomarinaceae bacterium HL-53 [LN899469]
852663
852739
+
Ile
GAT
-
¡û
>C161107771
LN899469
Gammaproteobacteria
Idiomarinaceae bacterium HL-53 [LN899469]
1241435
1241511
+
Ile
GAT
-
¡û
>C161107774
LN899469
Gammaproteobacteria
Idiomarinaceae bacterium HL-53 [LN899469]
1469406
1469482
+
Ile
GAT
-
¡û
>C161107796
LN899469
Gammaproteobacteria
Idiomarinaceae bacterium HL-53 [LN899469]
2553571
2553495
-
Ile
GAT
-
¡û
>W1610663908
LJVG01000132
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
225
301
+
Ile
GAT
[ENA]
¡û
>W1610663909
LJVG01000135
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
362
286
-
Ile
GAT
[ENA]
¡û
>W1610896182
LRUI01000047
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
145
221
+
Ile
GAT
[ENA]
¡û
>W1610919829
LSRT01000370
Gammaproteobacteria
Marinobacter sp. T13-3 [LSRT]
2601
2525
-
Ile
GAT
[ENA]
¡û
>W1611011999
LXWE01000015
Gammaproteobacteria
Alteromonadaceae bacterium XY-R5 [LXWE]
3502
3426
-
Ile
GAT
[ENA]
¡û
>WENV078015
AAFY01006112
Fossil microbial community from Whale Fall (Santa Cruz Basin)
160
238
+
Ile
GAT
[ENA]
>WENV078023
AAFY01007193
Fossil microbial community from Whale Fall (Santa Cruz Basin)
172
248
+
Ile
GAT
[ENA]
>ENV002554
AY934173
Environmental sample from ENV division of INSDC
93
171
+
Ile
GAT
[ENA]
>ENV002580
AY934187
Environmental sample from ENV division of INSDC
132
210
+
Ile
GAT
[ENA]
>ENV002947
AY934385
Environmental sample from ENV division of INSDC
90
168
+
Ile
GAT
[ENA]
>W1710087387
BDQM01000107
Gammaproteobacteria
Colwellia marinimaniae [BDQM]
230
306
+
Ile
GAT
[ENA]
¡û
>W1710609279
FXWH01000005
Gammaproteobacteria
Pseudidiomarina planktonica [FXWH]
3826
3750
-
Ile
GAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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