tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.20025 (30 seq.)
>W1711125566 LUNK01000020 Gammaproteobacteria Alteromonas macleodii [LUNK] 29981 30071 + Ser GGA [ENA] ¡û
>W1711438108 MIPZ01000005 Gammaproteobacteria Alteromonas macleodii [MIPZ] 1108958 1109048 + Ser GGA [ENA] ¡û
>C171071549 CP018024 Gammaproteobacteria Alteromonas mediterranea CP48 [CP018024] 1361711 1361801 + Ser GGA - ¡û
>WENV180589888 OCOS01031399 [OCOS] marine metagenome; Sterile flask 557 467 - Ser GGA [ENA] ¢þ
>WENV181234077 OFET01001977 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 2835 2925 + Ser GGA [ENA] ¢þ
>WENV170115821 CENG01051925 [CENG] marine metagenome genome assembly TARA_007_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 80 170 + Ser GGA [ENA] ¢þ
>WENV170142079 CENX01360455 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 456 366 - Ser GGA [ENA] ¢þ
>WENV170265249 CERD01123434 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1684 1774 + Ser GGA [ENA] ¢þ
>WENV170346018 CETG01007986 [CETG] marine metagenome genome assembly TARA_122_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1395 1485 + Ser GGA [ENA] ¢þ
>WENV170356794 CETJ01067633 [CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4798 4708 - Ser GGA [ENA] ¢þ
>WENV170423938 CEUO01046150 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 358 268 - Ser GGA [ENA] ¢þ
>WENV170454318 CEVA01031802 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3297 3207 - Ser GGA [ENA] ¢þ
>WENV170456227 CEVA01185199 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 382 292 - Ser GGA [ENA] ¢þ
>WENV170475548 CEVI01011631 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 294 384 + Ser GGA [ENA] ¢þ
>WENV170475697 CEVI01025302 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 199 109 - Ser GGA [ENA] ¢þ
>WENV170476270 CEVI01091825 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4051 3961 - Ser GGA [ENA] ¢þ
>WENV170513437 CEWA01003431 [CEWA] marine metagenome genome assembly TARA_038_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 209 119 - Ser GGA [ENA] ¢þ
>WENV170665435 JYMV01026247 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 6011 6101 + Ser GGA [ENA] ¢þ
>WENV170666429 JYMV01036919 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 133433 133523 + Ser GGA [ENA] ¢þ
>WENV170750465 LUMG01013991 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 537 627 + Ser GGA [ENA] ¢þ
>WENV170841585 MDSZ01225073 [MDSZ] marine metagenome; seawater 6230 6140 - Ser GGA [ENA] ¢þ
>WENV170842350 MDSZ01238821 [MDSZ] marine metagenome; seawater 2635 2545 - Ser GGA [ENA] ¢þ
>WENV170863141 MDTB01087521 [MDTB] marine metagenome; seawater 11 101 + Ser GGA [ENA] ¢þ
>C181031483 CP018321 Gammaproteobacteria Alteromonas macleodii Te101 [CP018321] 1480553 1480643 + Ser GGA - ¡û
>C191152415 CP036536 Gammaproteobacteria Salinimonas lutimaris DPSR-4 [CP036536] 2849297 2849207 - Ser GGA - ¡û
>C191172260 CP039852 Gammaproteobacteria Salinimonas iocasae KX18D6 [CP039852] 2588205 2588115 - Ser GGA - ¡û
>SRA1000879 SRR001048.230013 Line Islands Corals, microbial fraction from water of Palmyra (SRP000140) 2 92 + Ser GGA [SRA]
>C161071108 CP014323 Gammaproteobacteria Alteromonas macleodii D7 [CP014323] 1554123 1554213 + Ser GGA [Ensembl] ¡û
>C131007865 CP003841 Gammaproteobacteria Alteromonas macleodii ATCC 27126 [CP003841] 1426972 1427062 + Ser GGA [Ensembl] ¡û
>W1610936499 LUNK01000020 Gammaproteobacteria Alteromonas macleodii [LUNK] 29981 30071 + Ser GGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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