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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.212126 (6 seq.)
>W1711417372
MHFV01000036
Unclassified
Omnitrophica WOR_2 bacterium GWA2_37_7 [MHFV]
5163
5238
+
Trp
CCA
[ENA]
¡û
>W1711417630
MHGE01000032
Unclassified
Omnitrophica WOR_2 bacterium GWF2_38_59 [MHGE]
96444
96369
-
Trp
CCA
[ENA]
¡û
>W1711417835
MHHF01000091
Unclassified
Omnitrophica WOR_2 bacterium RIFOXYA12_FULL_38_10 [MHHF]
30913
30988
+
Trp
CCA
[ENA]
¡û
>W1711417879
MHHG01000055
Unclassified
Omnitrophica WOR_2 bacterium RIFOXYA2_FULL_38_17 [MHHG]
40676
40601
-
Trp
CCA
[ENA]
¡û
>W1711417912
MHHI01000010
Unclassified
Omnitrophica WOR_2 bacterium RIFOXYB2_FULL_38_16 [MHHI]
64697
64772
+
Trp
CCA
[ENA]
¡û
>W1711418000
MHHK01000062
Unclassified
Omnitrophica WOR_2 bacterium RIFOXYC2_FULL_38_12 [MHHK]
170928
170853
-
Trp
CCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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