tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.232078 (114 seq.)
>W1710873080 LMMN01000003 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 166678 166601 - Met CAT [ENA] ¡û
>W1710873081 LMMN01000003 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 166579 166503 - Met CAT [ENA] ¡û
>W1710873097 LMMN01000014 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 393 470 + Met CAT [ENA] ¡û
>W1710873098 LMMN01000014 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 494 570 + Met CAT [ENA] ¡û
>W1710873100 LMMN01000016 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 158 234 + Met CAT [ENA] ¡û
>W1710873111 LMMN01000028 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 86 162 + Met CAT [ENA] ¡û
>W1710874345 LMNN01000014 Alphaproteobacteria Methylobacterium sp. Leaf119 [LMNN] 5624 5700 + Met CAT [ENA] ¡û
>W1710874434 LMNP01000018 Alphaproteobacteria Methylobacterium sp. Leaf121 [LMNP] 5738 5814 + Met CAT [ENA] ¡û
>W1710874460 LMNQ01000001 Alphaproteobacteria Methylobacterium sp. Leaf122 [LMNQ] 578382 578458 + Met CAT [ENA] ¡û
>W1710874554 LMNS01000002 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 167308 167232 - Met CAT [ENA] ¡û
>W1710874570 LMNS01000021 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 16 92 + Met CAT [ENA] ¡û
>W1710874580 LMNS01000034 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 256910 256834 - Met CAT [ENA] ¡û
>W1710878022 LMQP01000001 Alphaproteobacteria Sphingomonas sp. Leaf412 [LMQP] 694109 694185 + Met CAT [ENA] ¡û
>W1710878288 LMQV01000007 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 143089 143013 - Met CAT [ENA] ¡û
>W1710878295 LMQV01000014 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 455 531 + Met CAT [ENA] ¡û
>W1710878302 LMQV01000029 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 167 243 + Met CAT [ENA] ¡û
>W1710878317 LMQV01000042 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 350 426 + Met CAT [ENA] ¡û
>W1711078704 LSNC01000079 Alphaproteobacteria Methylorubrum populi [LSNC] 5686 5762 + Met CAT [ENA] ¡û
>W1711078715 LSNC01000113 Alphaproteobacteria Methylorubrum populi [LSNC] 35102 35026 - Met CAT [ENA] ¡û
>C171092126 CP019322 Alphaproteobacteria Methylorubrum extorquens PSBB040 [CP019322] 67160 67236 + Met CAT - ¡û
>C171092129 CP019322 Alphaproteobacteria Methylorubrum extorquens PSBB040 [CP019322] 89417 89493 + Met CAT - ¡û
>C171092133 CP019322 Alphaproteobacteria Methylorubrum extorquens PSBB040 [CP019322] 588705 588781 + Met CAT - ¡û
>C171092136 CP019322 Alphaproteobacteria Methylorubrum extorquens PSBB040 [CP019322] 839495 839571 + Met CAT - ¡û
>C171092140 CP019322 Alphaproteobacteria Methylorubrum extorquens PSBB040 [CP019322] 1045531 1045607 + Met CAT - ¡û
>C171115207 CP021054 Alphaproteobacteria Methylorubrum zatmanii PSBB041 [CP021054] 3083747 3083671 - Met CAT - ¡û
>C171115210 CP021054 Alphaproteobacteria Methylorubrum zatmanii PSBB041 [CP021054] 3061465 3061389 - Met CAT - ¡û
>C171115214 CP021054 Alphaproteobacteria Methylorubrum zatmanii PSBB041 [CP021054] 2534798 2534722 - Met CAT - ¡û
>C171115217 CP021054 Alphaproteobacteria Methylorubrum zatmanii PSBB041 [CP021054] 2326234 2326158 - Met CAT - ¡û
>C171115221 CP021054 Alphaproteobacteria Methylorubrum zatmanii PSBB041 [CP021054] 2055278 2055202 - Met CAT - ¡û
>WENV180353949 OBLQ011225367 [OBLQ] soil metagenome; soil 50 126 + fMet CAT [ENA] ¢þ
>WENV181227843 OFDN01057503 [OFDN] hot springs metagenome; Water 444 520 + fMet CAT [ENA] ¢þ
>WENV181231865 OFEK01078167 [OFEK] activated sludge metagenome; Anaerobic digester 551 627 + fMet CAT [ENA] ¢þ
>C08006515 CP000908 Alphaproteobacteria Methylorubrum extorquens PA1 [CP000908] 1530099 1530026 - Met CAT [Ensembl] ¡û
>C08006519 CP000908 Alphaproteobacteria Methylorubrum extorquens PA1 [CP000908] 1109114 1109041 - Met CAT [Ensembl] ¡û
>C08006522 CP000908 Alphaproteobacteria Methylorubrum extorquens PA1 [CP000908] 1086773 1086700 - Met CAT [Ensembl] ¡û
>C08006525 CP000908 Alphaproteobacteria Methylorubrum extorquens PA1 [CP000908] 877147 877074 - Met CAT [Ensembl] ¡û
>C08006529 CP000908 Alphaproteobacteria Methylorubrum extorquens PA1 [CP000908] 640802 640729 - Met CAT [Ensembl] ¡û
>C08006664 CP001029 Alphaproteobacteria Methylorubrum populi BJ001 [CP001029] 1449699 1449626 - Met CAT [Ensembl] ¡û
>C08006667 CP001029 Alphaproteobacteria Methylorubrum populi BJ001 [CP001029] 1426820 1426747 - Met CAT [Ensembl] ¡û
>C08006670 CP001029 Alphaproteobacteria Methylorubrum populi BJ001 [CP001029] 1011768 1011695 - Met CAT [Ensembl] ¡û
>C08006673 CP001029 Alphaproteobacteria Methylorubrum populi BJ001 [CP001029] 759571 759498 - Met CAT [Ensembl] ¡û
>C08006677 CP001029 Alphaproteobacteria Methylorubrum populi BJ001 [CP001029] 602721 602648 - Met CAT [Ensembl] ¡û
>WENV170662345 JXWW01044296 [JXWW] soil metagenome; rice field; organic GM Plot 431 355 - Met CAT [ENA] ¢þ
>WENV170977189 MTKZ01018366 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 5822 5898 + Met CAT [ENA] ¢þ
>C181000377 AP014809 Alphaproteobacteria Methylorubrum populi P-1M [AP014809] 1505846 1505770 - Met CAT - ¡û
>C181000380 AP014809 Alphaproteobacteria Methylorubrum populi P-1M [AP014809] 1111981 1111905 - Met CAT - ¡û
>C181000383 AP014809 Alphaproteobacteria Methylorubrum populi P-1M [AP014809] 851128 851052 - Met CAT - ¡û
>C181000386 AP014809 Alphaproteobacteria Methylorubrum populi P-1M [AP014809] 827591 827515 - Met CAT - ¡û
>C181000390 AP014809 Alphaproteobacteria Methylorubrum populi P-1M [AP014809] 642464 642388 - Met CAT - ¡û
>C181175663 CP029173 Alphaproteobacteria Methylobacterium sp. DM1 [CP029173] 1650382 1650306 - Met CAT - ¡û
>C181175666 CP029173 Alphaproteobacteria Methylobacterium sp. DM1 [CP029173] 1626920 1626844 - Met CAT - ¡û
>C181175670 CP029173 Alphaproteobacteria Methylobacterium sp. DM1 [CP029173] 927980 927904 - Met CAT - ¡û
>C181175673 CP029173 Alphaproteobacteria Methylobacterium sp. DM1 [CP029173] 700061 699985 - Met CAT - ¡û
>C181175677 CP029173 Alphaproteobacteria Methylobacterium sp. DM1 [CP029173] 523566 523490 - Met CAT - ¡û
>C181227841 LT962688 Alphaproteobacteria Methylorubrum extorquens TK 0001 [LT962688] 4396830 4396906 + Met CAT - ¡û
>C181227844 LT962688 Alphaproteobacteria Methylorubrum extorquens TK 0001 [LT962688] 4419087 4419163 + Met CAT - ¡û
>C181227848 LT962688 Alphaproteobacteria Methylorubrum extorquens TK 0001 [LT962688] 4865269 4865345 + Met CAT - ¡û
>C181227851 LT962688 Alphaproteobacteria Methylorubrum extorquens TK 0001 [LT962688] 5087186 5087262 + Met CAT - ¡û
>C181227855 LT962688 Alphaproteobacteria Methylorubrum extorquens TK 0001 [LT962688] 5369937 5370013 + Met CAT - ¡û
>W09106860 ABEC01000006 Alphaproteobacteria Methylorubrum extorquens PA1 [ABEC] 520 596 + Met CAT [ENA] ¡û
>W09106864 ABEC01000006 Alphaproteobacteria Methylorubrum extorquens PA1 [ABEC] 438982 439058 + Met CAT [ENA] ¡û
>W09106870 ABEC01000010 Alphaproteobacteria Methylorubrum extorquens PA1 [ABEC] 177 253 + Met CAT [ENA] ¡û
>W09106873 ABEC01000012 Alphaproteobacteria Methylorubrum extorquens PA1 [ABEC] 106268 106192 - Met CAT [ENA] ¡û
>W09106876 ABEC01000014 Alphaproteobacteria Methylorubrum extorquens PA1 [ABEC] 514 590 + Met CAT [ENA] ¡û
>W09106878 ABEC01000016 Alphaproteobacteria Methylorubrum extorquens PA1 [ABEC] 41 117 + Met CAT [ENA] ¡û
>C09107444 CP001298 Alphaproteobacteria Methylorubrum extorquens CM4 [CP001298] 1635117 1635041 - Met CAT [Ensembl] ¡û
>C09107448 CP001298 Alphaproteobacteria Methylorubrum extorquens CM4 [CP001298] 1155521 1155445 - Met CAT [Ensembl] ¡û
>C09107451 CP001298 Alphaproteobacteria Methylorubrum extorquens CM4 [CP001298] 778162 778086 - Met CAT [Ensembl] ¡û
>C09107454 CP001298 Alphaproteobacteria Methylorubrum extorquens CM4 [CP001298] 755816 755740 - Met CAT [Ensembl] ¡û
>C09107458 CP001298 Alphaproteobacteria Methylorubrum extorquens CM4 [CP001298] 586234 586158 - Met CAT [Ensembl] ¡û
>C09107531 FP103042 Alphaproteobacteria Methylorubrum extorquens DM4 [FP103042] 1899284 1899208 - Met CAT [Ensembl] ¡û
>C09107535 FP103042 Alphaproteobacteria Methylorubrum extorquens DM4 [FP103042] 1357616 1357540 - Met CAT [Ensembl] ¡û
>C09107538 FP103042 Alphaproteobacteria Methylorubrum extorquens DM4 [FP103042] 1335359 1335283 - Met CAT [Ensembl] ¡û
>C09107541 FP103042 Alphaproteobacteria Methylorubrum extorquens DM4 [FP103042] 857165 857089 - Met CAT [Ensembl] ¡û
>C09107545 FP103042 Alphaproteobacteria Methylorubrum extorquens DM4 [FP103042] 526237 526161 - Met CAT [Ensembl] ¡û
>C09107632 CP001510 Alphaproteobacteria Methylorubrum extorquens AM1 [CP001510] 1251408 1251332 - Met CAT [Ensembl] ¡û
>C09107635 CP001510 Alphaproteobacteria Methylorubrum extorquens AM1 [CP001510] 1229048 1228972 - Met CAT [Ensembl] ¡û
>C09107639 CP001510 Alphaproteobacteria Methylorubrum extorquens AM1 [CP001510] 814016 813940 - Met CAT [Ensembl] ¡û
>C09107642 CP001510 Alphaproteobacteria Methylorubrum extorquens AM1 [CP001510] 601840 601764 - Met CAT [Ensembl] ¡û
>C09107646 CP001510 Alphaproteobacteria Methylorubrum extorquens AM1 [CP001510] 428598 428522 - Met CAT [Ensembl] ¡û
>W1810658543 QJJJ01000009 Alphaproteobacteria Methylobacterium sp. B4 [QJJJ] 189966 189890 - Met CAT [ENA] ¡û
>SRA1015314 SRR023846.13241 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 69 145 + Met CAT [SRA]
>SRA1015931 SRR023846.268464 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 73 149 + Met CAT [SRA]
>C161004991 CP006992 Alphaproteobacteria Methylobacterium sp. AMS5 [CP006992] 1300836 1300760 - Met CAT [Ensembl] ¡û
>C161004994 CP006992 Alphaproteobacteria Methylobacterium sp. AMS5 [CP006992] 1281086 1281010 - Met CAT [Ensembl] ¡û
>C161004998 CP006992 Alphaproteobacteria Methylobacterium sp. AMS5 [CP006992] 842618 842542 - Met CAT [Ensembl] ¡û
>C161005001 CP006992 Alphaproteobacteria Methylobacterium sp. AMS5 [CP006992] 586467 586391 - Met CAT [Ensembl] ¡û
>C161005005 CP006992 Alphaproteobacteria Methylobacterium sp. AMS5 [CP006992] 396019 395943 - Met CAT [Ensembl] ¡û
>W121010688 AGJK01000112 Alphaproteobacteria Methylorubrum extorquens DSM 13060 [AGJK] 16516 16592 + Met CAT [ENA] ¡û
>W121010698 AGJK01000208 Alphaproteobacteria Methylorubrum extorquens DSM 13060 [AGJK] 365 441 + Met CAT [ENA] ¡û
>W121010704 AGJK01000606 Alphaproteobacteria Methylorubrum extorquens DSM 13060 [AGJK] 240 316 + Met CAT [ENA] ¡û
>W1610043182 BAZP01000549 Alphaproteobacteria Methylorubrum thiocyanatum JCM 10893 [BAZP] 1861 1937 + Met CAT [ENA] ¡û
>W1610735443 LMMN01000014 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 393 470 + Met CAT [ENA] ¡û
>W1610735444 LMMN01000014 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 494 570 + Met CAT [ENA] ¡û
>W1610735446 LMMN01000016 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 158 234 + Met CAT [ENA] ¡û
>W1610735457 LMMN01000028 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 86 162 + Met CAT [ENA] ¡û
>W1610736691 LMNN01000014 Alphaproteobacteria Methylobacterium sp. Leaf119 [LMNN] 5624 5700 + Met CAT [ENA] ¡û
>W1610736780 LMNP01000018 Alphaproteobacteria Methylobacterium sp. Leaf121 [LMNP] 5738 5814 + Met CAT [ENA] ¡û
>W1610736806 LMNQ01000001 Alphaproteobacteria Methylobacterium sp. Leaf122 [LMNQ] 578382 578458 + Met CAT [ENA] ¡û
>W1610736900 LMNS01000002 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 167308 167232 - Met CAT [ENA] ¡û
>W1610736916 LMNS01000021 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 16 92 + Met CAT [ENA] ¡û
>W1610736926 LMNS01000034 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 256910 256834 - Met CAT [ENA] ¡û
>W1610740368 LMQP01000001 Alphaproteobacteria Sphingomonas sp. Leaf412 [LMQP] 694109 694185 + Met CAT [ENA] ¡û
>W1610740634 LMQV01000007 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 143089 143013 - Met CAT [ENA] ¡û
>W1610740641 LMQV01000014 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 455 531 + Met CAT [ENA] ¡û
>W1610740648 LMQV01000029 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 167 243 + Met CAT [ENA] ¡û
>W1610740663 LMQV01000042 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 350 426 + Met CAT [ENA] ¡û
>W1610917614 LSNC01000079 Alphaproteobacteria Methylorubrum populi [LSNC] 5686 5762 + Met CAT [ENA] ¡û
>W1610917625 LSNC01000113 Alphaproteobacteria Methylorubrum populi [LSNC] 35102 35026 - Met CAT [ENA] ¡û
>W1710040342 BAZP01000549 Alphaproteobacteria Methylorubrum thiocyanatum JCM 10893 [BAZP] 1861 1937 + Met CAT [ENA] ¡û
>W1710567530 FOSV01000003 Alphaproteobacteria Methylorubrum salsuginis [FOSV] 332668 332592 - Met CAT [ENA] ¡û
>W1710567550 FOSV01000012 Alphaproteobacteria Methylorubrum salsuginis [FOSV] 390 466 + Met CAT [ENA] ¡û
>W1710567560 FOSV01000021 Alphaproteobacteria Methylorubrum salsuginis [FOSV] 81954 81878 - Met CAT [ENA] ¡û
>W1710567563 FOSV01000024 Alphaproteobacteria Methylorubrum salsuginis [FOSV] 219 295 + Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK