This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.235290 (75 seq.)
>W1711578013
MNQJ01000040
Bacteroidota
Bacteroidales bacterium 43_8 [MNQJ]
905
831
-
Pro
CGG
[ENA]
¡û
>W1711580856
MNTL01000060
Bacillota
Roseburia sp. CAG:10041_57 [MNTL]
49326
49400
+
Pro
CGG
[ENA]
¡û
>W131216767
ATWC01000022
Bacillota
Lachnospiraceae bacterium NK4A179 [ATWC]
3166
3092
-
Pro
CGG
[ENA]
¡û
>WENV180154558
OAUU01000088
[OAUU] human gut metagenome; faeces
28359
28285
-
Pro
CGG
[ENA]
¡û
>WENV180158990
OAVB01000165
[OAVB] human gut metagenome; faeces
24753
24827
+
Pro
CGG
[ENA]
¡û
>WENV180175454
OAWC01000067
[OAWC] human gut metagenome; faeces
87920
87994
+
Pro
CGG
[ENA]
¡û
>WENV180208020
OBAI01047341
[OBAI] human gut metagenome; human gut
896
822
-
Pro
CGG
[ENA]
¡û
>WENV180330669
OBKV01153945
[OBKV] human gut metagenome; human gut
255
181
-
Pro
CGG
[ENA]
¡û
>WENV180331758
OBLC01000283
[OBLC] human gut metagenome; human gut
13167
13241
+
Pro
CGG
[ENA]
¡û
>WENV180463015
OBYC01000096
[OBYC] human gut metagenome; faeces
82464
82538
+
Pro
CGG
[ENA]
¡û
>WENV180527514
OCHJ01000191
[OCHJ] human gut metagenome; human gut
65495
65569
+
Pro
CGG
[ENA]
¡û
>WENV180599090
OCPP01000065
[OCPP] human gut metagenome; faeces
27887
27813
-
Pro
CGG
[ENA]
¡û
>WENV180615756
OCPZ01022186
[OCPZ] human gut metagenome; human gut
640
566
-
Pro
CGG
[ENA]
¡û
>WENV180620978
OCQC01000140
[OCQC] human gut metagenome; human gut
29532
29458
-
Pro
CGG
[ENA]
¡û
>WENV180646392
OCSH01001510
[OCSH] human gut metagenome; human gut
14029
14103
+
Pro
CGG
[ENA]
¡û
>WENV180683990
OCVV012850916
[OCVV] gut metagenome; gut
63235
63161
-
Pro
AGG
[ENA]
¡û
>WENV180684000
OCVV012850916
[OCVV] gut metagenome; gut
63235
63161
-
Pro
AGG
[ENA]
¡û
>WENV180894283
ODMR01053186
[ODMR] human metagenome; G_DNA_Stool
708
782
+
Pro
CGG
[ENA]
¡û
>WENV180956443
ODUK01001298
[ODUK] human metagenome; G_DNA_Stool
15350
15424
+
Pro
CGG
[ENA]
¡û
>WENV181219816
OFCP01001158
[OFCP] metagenome; Human gut stool
2421
2347
-
Pro
CGG
[ENA]
¡û
>WENV181421020
OGCN01011662
[OGCN] human gut metagenome; human gut
2711
2637
-
Pro
CGG
[ENA]
¡û
>WENV181421161
OGCN01017251
[OGCN] human gut metagenome; human gut
2047
1973
-
Pro
CGG
[ENA]
¡û
>WENV181435131
OGDF01002435
[OGDF] human gut metagenome; human gut
3496
3570
+
Pro
CGG
[ENA]
¡û
>WENV181444904
OGDS01000190
[OGDS] metagenome; Human gut stool
58511
58585
+
Pro
CGG
[ENA]
¡û
>WENV181538979
OGHZ01000344
[OGHZ] metagenome; Human gut stool
27433
27359
-
Pro
CGG
[ENA]
¡û
>WENV181545199
OGIG01017079
[OGIG] metagenome; Human gut stool
879
805
-
Pro
CGG
[ENA]
¡û
>WENV181553656
OGIR01000282
[OGIR] metagenome; Human gut stool
18627
18553
-
Pro
CGG
[ENA]
¡û
>WENV181556176
OGIU01004142
[OGIU] metagenome; Human gut stool
2570
2496
-
Pro
CGG
[ENA]
¡û
>WENV181565220
OGJI01000345
[OGJI] metagenome; Human gut stool
29805
29879
+
Pro
CGG
[ENA]
¡û
>WENV181650992
OGNV01000409
[OGNV] metagenome; Human gut stool
6647
6721
+
Pro
CGG
[ENA]
¡û
>WENV181702277
OGPH01042597
[OGPH] human gut metagenome; faeces
632
557
-
Pro
CGG
[ENA]
¡û
>WENV181784176
OGRL01037107
[OGRL] human gut metagenome; faeces
57
131
+
Pro
CGG
[ENA]
¡û
>WENV181975091
OHAC01001498
[OHAC] human gut metagenome; faeces
4298
4372
+
Pro
CGG
[ENA]
¡û
>WENV182006911
OHBG01001569
[OHBG] human gut metagenome; feces
5930
6004
+
Pro
CGG
[ENA]
¡û
>WENV182012604
OHBM01051107
[OHBM] human gut metagenome; faeces
370
444
+
Pro
CGG
[ENA]
¡û
>WENV182085623
OHGS01001356
[OHGS] human gut metagenome; feces
3770
3696
-
Pro
CGG
[ENA]
¡û
>WENV182118807
OHJG01014143
[OHJG] human gut metagenome; feces
527
453
-
Pro
CGG
[ENA]
¡û
>WENV182140369
OHKQ01002174
[OHKQ] human gut metagenome; feces
2646
2572
-
Pro
CGG
[ENA]
¡û
>WENV182149553
OHLH01002068
[OHLH] human gut metagenome; feces
1582
1656
+
Pro
CGG
[ENA]
¡û
>WENV182211584
OHQF01001462
[OHQF] human gut metagenome; feces
4298
4224
-
Pro
CGG
[ENA]
¡û
>WENV182225693
OHRD01024984
[OHRD] human gut metagenome; feces
132
206
+
Pro
CGG
[ENA]
¡û
>WENV182267063
OHTZ01002122
[OHTZ] human gut metagenome; feces
5110
5184
+
Pro
CGG
[ENA]
¡û
>WENV182532238
OIXA01001320
[OIXA] human gut metagenome; faeces
6698
6772
+
Pro
CGG
[ENA]
¡û
>WENV182635294
OJKY01057351
[OJKY] metagenome; faeces
777
851
+
Pro
CGG
[ENA]
¡û
>WENV182666614
OJNH01041602
[OJNH] human gut metagenome; feces
443
517
+
Pro
CGG
[ENA]
¡û
>WENV182911649
OKTL01003232
[OKTL] human gut metagenome; feces
50
124
+
Pro
CGG
[ENA]
¡û
>WENV182939845
OKVF01000876
[OKVF] human gut metagenome; human gut
15063
15137
+
Pro
CGG
[ENA]
¡û
>WENV183097326
OLNE01001707
[OLNE] human gut metagenome; faeces
227
301
+
Pro
CGG
[ENA]
¡û
>WENV183123492
OLNW01001017
[OLNW] human gut metagenome; faeces
3350
3424
+
Pro
CGG
[ENA]
¡û
>WENV183151231
OLOP01067112
[OLOP] human gut metagenome; faeces
86
160
+
Pro
CGG
[ENA]
¡û
>WENV183168441
OLOZ01019238
[OLOZ] human gut metagenome; faeces
1032
958
-
Pro
CGG
[ENA]
¡û
>WENV183178090
OLPG01023615
[OLPG] human gut metagenome; faeces
54
128
+
Pro
CGG
[ENA]
¡û
>WENV183184675
OLPN01000753
[OLPN] human gut metagenome; faeces
21823
21749
-
Pro
CGG
[ENA]
¡û
>WENV183189146
OLPQ01000629
[OLPQ] human gut metagenome; faeces
14626
14699
+
Pro
CGG
[ENA]
¡û
>WENV183194783
OLPT01000396
[OLPT] human gut metagenome; faeces
9656
9730
+
Pro
CGG
[ENA]
¡û
>WENV183195104
OLPT01002115
[OLPT] human gut metagenome; faeces
10555
10481
-
Pro
CGG
[ENA]
¡û
>WENV183197262
OLPU01024347
[OLPU] human gut metagenome; faeces
19
93
+
Pro
CGG
[ENA]
¡û
>WENV183201424
OLPW01029972
[OLPW] human gut metagenome; faeces
42
116
+
Pro
CGG
[ENA]
¡û
>WENV183210717
OLQC01004378
[OLQC] human gut metagenome; faeces
1395
1321
-
Pro
CGG
[ENA]
¡û
>WENV183219926
OLQK01002654
[OLQK] human gut metagenome; faeces
2737
2663
-
Pro
CGG
[ENA]
¡û
>WENV183243249
OLRC01021653
[OLRC] human gut metagenome; faeces
303
377
+
Pro
CGG
[ENA]
¡û
>WENV183249574
OLRG01005058
[OLRG] human gut metagenome; faeces
1513
1439
-
Pro
CGG
[ENA]
¡û
>WENV183256228
OLRK01011881
[OLRK] human gut metagenome; faeces
379
453
+
Pro
CGG
[ENA]
¡û
>WENV183262816
OLRQ01010102
[OLRQ] human gut metagenome; faeces
110
184
+
Pro
CGG
[ENA]
¡û
>WENV183278630
OLSA01029751
[OLSA] human gut metagenome; faeces
1502
1428
-
Pro
CGG
[ENA]
¡û
>WENV183282186
OLSC01001213
[OLSC] human gut metagenome; faeces
15503
15429
-
Pro
CGG
[ENA]
¡û
>WENV183291440
OLSI01001847
[OLSI] human gut metagenome; faeces
381
455
+
Pro
CGG
[ENA]
¡û
>WENV183310584
OLVO01000568
[OLVO] human gut metagenome; faeces
9422
9348
-
Pro
CGG
[ENA]
¡û
>WENV183570085
OOCD01000037
[OOCD] human gut metagenome; human gut
67843
67917
+
Pro
CGG
[ENA]
¡û
>WENV183632779
OOIF01017942
[OOIF] human gut metagenome; human gut
1718
1644
-
Pro
CGG
[ENA]
¡û
>WENV170110521
CECF01031817
[CECF] gut metagenome; human stools
1024
950
-
Pro
CGG
[ENA]
¡û
>W2010278194
CABMER010000016
Bacillota
Clostridiaceae bacterium [CABMER]
113
187
+
Pro
CGG
[ENA]
¡û
>W2010278195
CABMER010000016
Bacillota
Clostridiaceae bacterium [CABMER]
33453
33526
+
Pro
CGG
[ENA]
¡û
>W1710507639
FMVK01000013
Bacillota
Lachnospiraceae bacterium XPB1003 [FMVK]
30030
30103
+
Pro
CGG
[ENA]
¡û
>W1710603708
FUZG01000013
Bacillota
Lachnospiraceae bacterium [FUZG]
25218
25144
-
Pro
CGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK