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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
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1 Group(s).
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Representative sequence of each cluster
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Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.237359 (271 seq.)
>W1710786228
LJIS01000129
Actinomycetota
Rhodococcus sp. ADH [LJIS]
233854
233779
-
Ala
CGC
[ENA]
¡û
>W1710889248
LNAK01000043
Actinomycetota
Rhodococcus sp. KB6 [LNAK]
840897
840972
+
Ala
CGC
[ENA]
¡û
>W1710899239
LNIU01000007
Actinomycetota
Prescottella equi [LNIU]
615459
615534
+
Ala
CGC
[ENA]
¡û
>W1710909142
LNQH01000002
Actinomycetota
Rhodococcus qingshengii enclensis [LNQH]
739
664
-
Ala
CGC
[ENA]
¡û
>W1710994913
LPZM01000071
Actinomycetota
Rhodococcus sp. AJR001 [LPZM]
107397
107322
-
Ala
CGC
[ENA]
¡û
>W1710994957
LPZN01000044
Actinomycetota
Rhodococcus gordoniae [LPZN]
146043
145968
-
Ala
CGC
[ENA]
¡û
>W1711049692
LRQY01000015
Actinomycetota
Prescottella equi [LRQY]
284977
285052
+
Ala
CGC
[ENA]
¡û
>W1711049771
LRQZ01000113
Actinomycetota
Prescottella equi [LRQZ]
7720
7645
-
Ala
CGC
[ENA]
¡û
>W1711049812
LRRA01000037
Actinomycetota
Prescottella equi [LRRA]
185646
185721
+
Ala
CGC
[ENA]
¡û
>W1711049862
LRRB01000140
Actinomycetota
Aldersonia kunmingensis [LRRB]
66445
66370
-
Ala
CGC
[ENA]
¡û
>W1711050038
LRRF01000094
Actinomycetota
Prescottella equi [LRRF]
15592
15667
+
Ala
CGC
[ENA]
¡û
>W1711050075
LRRG01000052
Actinomycetota
Rhodococcus opacus [LRRG]
10038
10113
+
Ala
CGC
[ENA]
¡û
>W1711050133
LRRH01000056
Actinomycetota
Rhodococcus phenolicus [LRRH]
2135
2060
-
Ala
CGC
[ENA]
¡û
>W1711050195
LRRI01000067
Actinomycetota
Rhodococcus pyridinivorans [LRRI]
24544
24619
+
Ala
CGC
[ENA]
¡û
>W1711050223
LRRJ01000015
Actinomycetota
Rhodococcus qingshengii [LRRJ]
352354
352429
+
Ala
CGC
[ENA]
¡û
>W1711050282
LRRK01000014
Actinomycetota
Rhodococcus rhodochrous [LRRK]
18903
18978
+
Ala
CGC
[ENA]
¡û
>W1711050317
LRRL01000006
Actinomycetota
Rhodococcus ruber [LRRL]
55579
55504
-
Ala
CGC
[ENA]
¡û
>W1711065075
LSBM01000090
Actinomycetota
Rhodococcus sp. SC4 [LSBM]
6885
6960
+
Ala
CGC
[ENA]
¡û
>W1711091464
LTCZ01000127
Actinomycetota
Rhodococcus sp. LB1 [LTCZ]
3422
3347
-
Ala
CGC
[ENA]
¡û
>W1711129369
LUTX01000005
Actinomycetota
Rhodococcus sp. HS-D2 [LUTX]
38418
38493
+
Ala
CGC
[ENA]
¡û
>W1711138340
LVCT01000031
Actinomycetota
Rhodococcus sp. EPR-134 [LVCT]
8077
8152
+
Ala
CGC
[ENA]
¡û
>W1711168047
LVXC01000002
Actinomycetota
Rhodococcus qingshengii [LVXC]
2297964
2298039
+
Ala
CGC
[ENA]
¡û
>W1711171852
LWBN01000001
Actinomycetota
Prescottella equi [LWBN]
596908
596983
+
Ala
CGC
[ENA]
¡û
>W1711179191
LWHK01000177
Actinomycetota
Rhodococcus sp. 1139 [LWHK]
116645
116720
+
Ala
CGC
[ENA]
¡û
>W1711179473
LWHR01000002
Actinomycetota
Prescottella equi [LWHR]
553608
553683
+
Ala
CGC
[ENA]
¡û
>W1711179521
LWHS01000001
Actinomycetota
Prescottella equi [LWHS]
593829
593904
+
Ala
CGC
[ENA]
¡û
>W1711179592
LWHT01000002
Actinomycetota
Prescottella equi [LWHT]
734377
734452
+
Ala
CGC
[ENA]
¡û
>W1711179642
LWHU01000002
Actinomycetota
Prescottella equi [LWHU]
576619
576694
+
Ala
CGC
[ENA]
¡û
>W1711179703
LWHV01000002
Actinomycetota
Prescottella equi [LWHV]
214109
214034
-
Ala
CGC
[ENA]
¡û
>W1711179756
LWHW01000005
Actinomycetota
Prescottella equi [LWHW]
138489
138564
+
Ala
CGC
[ENA]
¡û
>W1711179803
LWHX01000002
Actinomycetota
Prescottella equi [LWHX]
220993
220918
-
Ala
CGC
[ENA]
¡û
>W1711179858
LWHY01000003
Actinomycetota
Prescottella equi [LWHY]
231207
231132
-
Ala
CGC
[ENA]
¡û
>W1711179892
LWHZ01000001
Actinomycetota
Prescottella equi [LWHZ]
375759
375684
-
Ala
CGC
[ENA]
¡û
>W1711179962
LWIA01000003
Actinomycetota
Prescottella equi [LWIA]
726905
726980
+
Ala
CGC
[ENA]
¡û
>W1711179991
LWIB01000001
Actinomycetota
Prescottella equi [LWIB]
576619
576694
+
Ala
CGC
[ENA]
¡û
>W1711180047
LWIC01000001
Actinomycetota
Prescottella equi [LWIC]
386785
386710
-
Ala
CGC
[ENA]
¡û
>W1711192205
LWTO01000002
Actinomycetota
Prescottella equi [LWTO]
536655
536730
+
Ala
CGC
[ENA]
¡û
>W1711192253
LWTP01000001
Actinomycetota
Prescottella equi [LWTP]
730969
731044
+
Ala
CGC
[ENA]
¡û
>W1711192304
LWTQ01000001
Actinomycetota
Prescottella equi [LWTQ]
604669
604744
+
Ala
CGC
[ENA]
¡û
>W1711192367
LWTR01000030
Actinomycetota
Prescottella equi [LWTR]
1685
1760
+
Ala
CGC
[ENA]
¡û
>W1711192408
LWTS01000001
Actinomycetota
Prescottella equi [LWTS]
582436
582511
+
Ala
CGC
[ENA]
¡û
>W1711192457
LWTT01000001
Actinomycetota
Prescottella equi [LWTT]
384928
385003
+
Ala
CGC
[ENA]
¡û
>W1711192504
LWTU01000001
Actinomycetota
Prescottella equi [LWTU]
212801
212876
+
Ala
CGC
[ENA]
¡û
>W1711192572
LWTV01000003
Actinomycetota
Prescottella equi [LWTV]
205952
206027
+
Ala
CGC
[ENA]
¡û
>W1711192613
LWTW01000001
Actinomycetota
Prescottella equi [LWTW]
225538
225463
-
Ala
CGC
[ENA]
¡û
>W1711192680
LWTX01000002
Actinomycetota
Prescottella equi [LWTX]
221002
220927
-
Ala
CGC
[ENA]
¡û
>W1711192737
LWTY01000003
Actinomycetota
Prescottella equi [LWTY]
380765
380690
-
Ala
CGC
[ENA]
¡û
>W1711207197
LXFG01000002
Actinomycetota
Prescottella equi [LXFG]
247559
247484
-
Ala
CGC
[ENA]
¡û
>W1711207252
LXFH01000003
Actinomycetota
Prescottella equi [LXFH]
213957
213882
-
Ala
CGC
[ENA]
¡û
>W1711207305
LXFI01000003
Actinomycetota
Prescottella equi [LXFI]
554014
554089
+
Ala
CGC
[ENA]
¡û
>W1711252822
LYPG01000049
Actinomycetota
Rhodococcus erythropolis [LYPG]
139623
139548
-
Ala
CGC
[ENA]
¡û
>W1711261811
LYXB01000001
Actinomycetota
Rhodococcus qingshengii [LYXB]
180727
180652
-
Ala
CGC
[ENA]
¡û
>W1711281667
LZMJ01000038
Actinomycetota
Rhodococcus sp. 852002-51564_SCH6189132-a [LZMJ]
107292
107217
-
Ala
CGC
[ENA]
¡û
>W1711351269
MDCH01000004
Actinomycetota
Rhodococcus erythropolis [MDCH]
364540
364465
-
Ala
CGC
[ENA]
¡û
>W1711475765
MJVD01000055
Actinomycetota
Rhodococcus erythropolis 1159 [MJVD]
361448
361523
+
Ala
CGC
[ENA]
¡û
>W1711518835
MLKO01000001
Actinomycetota
Rhodococcus erythropolis [MLKO]
1527802
1527877
+
Ala
CGC
[ENA]
¡û
>W1711539239
MLYX02000001
Actinomycetota
Rhodococcus sp. M8 [MLYX]
3222982
3223057
+
Ala
CGC
[ENA]
¡û
>W1711577182
MNPP01000001
Actinomycetota
Rhodococcus sp. D-1 [MNPP]
407855
407780
-
Ala
CGC
[ENA]
¡û
>W1711666248
MRBQ01000012
Actinomycetota
Rhodococcus erythropolis [MRBQ]
149959
150034
+
Ala
CGC
[ENA]
¡û
>W1711705189
MSQF01000008
Actinomycetota
Rhodococcus sp. YL-0 [MSQF]
34899
34824
-
Ala
CGC
[ENA]
¡û
>W1711738382
MUBD01000003
Actinomycetota
Rhodococcus qingshengii [MUBD]
1413180
1413255
+
Ala
CGC
[ENA]
¡û
>W1711766890
MUZB01000002
Actinomycetota
Rhodococcus sp. 66b [MUZB]
349698
349773
+
Ala
CGC
[ENA]
¡û
>C171001769
CP009111
Actinomycetota
Rhodococcus opacus 1CP [CP009111]
2071862
2071937
+
Ala
CGC
-
¡û
>C171034423
CP014941
Actinomycetota
Rhodococcus sp. BH4 [CP014941]
4631242
4631167
-
Ala
CGC
-
¡û
>C171039234
CP015529
Actinomycetota
Rhodococcus sp. WB1 [CP015529]
3970489
3970414
-
Ala
CGC
-
¡û
>C171051551
CP016819
Actinomycetota
Rhodococcus sp. p52 [CP016819]
2372991
2373066
+
Ala
CGC
-
¡û
>C171054945
CP017014
Actinomycetota
Rhodococcus sp. WMMA185 [CP017014]
396558
396631
+
Ala
CGC
-
¡û
>C171060530
CP017299
Actinomycetota
Rhodococcus sp. YL-1 [CP017299]
4630836
4630761
-
Ala
CGC
-
¡û
>C171072219
CP018063
Actinomycetota
Rhodococcus sp. 2G [CP018063]
313798
313873
+
Ala
CGC
-
¡û
>C171095473
CP019572
Actinomycetota
Rhodococcus sp. MTM3W5.2 [CP019572]
4555608
4555533
-
Ala
CGC
-
¡û
>W131059048
ANGC01000001
Actinomycetota
Rhodococcus ruber Chol-4 [ANGC]
167967
168042
+
Ala
CGC
[ENA]
¡û
>W131061491
ANIU01000421
Actinomycetota
Rhodococcus wratislaviensis IFP 2016 [ANIU]
1123
1048
-
Ala
CGC
[ENA]
¡û
>W131087786
AODN01000006
Actinomycetota
Rhodococcus qingshengii BKS 20-40 [AODN]
727
652
-
Ala
CGC
[ENA]
¡û
>W131087855
AODO01000024
Actinomycetota
Rhodococcus triatomae BKS 15-14 [AODO]
17839
17914
+
Ala
CGC
[ENA]
¡û
>W131089896
AOEX01000059
Actinomycetota
Rhodococcus ruber BKS 20-38 [AOEX]
76081
76156
+
Ala
CGC
[ENA]
¡û
>W131251275
CAVJ010000227
Actinomycetota
Rhodococcus aetherivorans EsD8 [CAVJ]
31762
31687
-
Ala
CGC
[ENA]
¡û
>W131161740
AQXZ01000009
Actinomycetota
Smaragdicoccus niigatensis DSM 44881 [AQXZ]
20837
20912
+
Ala
CGC
[ENA]
¡û
>C018654
CP000431
Actinomycetota
Rhodococcus jostii RHA1 [CP000431]
6060079
6060154
+
Ala
CGC
[Ensembl]
¡û
>WENV180354905
OBNE01031155
[OBNE] groundwater metagenome; groundwater
29993
30068
+
Ala
CGC
[ENA]
¢þ
>W141063599
APJC01000011
Actinomycetota
Prescottella equi NBRC 101255 = C 7 [APJC]
184573
184648
+
Ala
CGC
[ENA]
¡û
>W141071715
ASJJ01000001
Actinomycetota
Rhodococcus rhodochrous ATCC 17895 [ASJJ]
532
457
-
Ala
CGC
[ENA]
¡û
>W141072058
ASKF01000008
Actinomycetota
Rhodococcus erythropolis R138 [ASKF]
349050
348975
-
Ala
CGC
[ENA]
¡û
>W141091833
AUZK01000002
Actinomycetota
Rhodococcus erythropolis DN1 [AUZK]
499676
499751
+
Ala
CGC
[ENA]
¡û
>W141092525
AVAE01000001
Actinomycetota
Rhodococcus aetherivorans BCP1 [AVAE]
796001
796076
+
Ala
CGC
[ENA]
¡û
>W141094463
AVCO01000047
Actinomycetota
Rhodococcus sp. P27 [AVCO]
163129
163054
-
Ala
CGC
[ENA]
¡û
>W141202624
AZHI01000069
Actinomycetota
Rhodococcus rhodochrous ATCC 21198 [AZHI]
31754
31679
-
Ala
CGC
[ENA]
¡û
>W141231393
BATZ01000047
Actinomycetota
Nocardia otitidiscaviarum IFM 11049 [BATZ]
90240
90167
-
Ala
CGC
[ENA]
¡û
>W141233950
BAWF01000095
Actinomycetota
Rhodococcus wratislaviensis NBRC 100605 [BAWF]
267840
267915
+
Ala
CGC
[ENA]
¡û
>W141238656
BBLL01000086
Actinomycetota
Rhodococcus erythropolis [BBLL]
223976
223901
-
Ala
CGC
[ENA]
¡û
>WENV183671068
ORJL011022786
[ORJL] groundwater metagenome; groundwater
147
72
-
Ala
CGC
[ENA]
¢þ
>WENV170762794
LUMW01040539
[LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m
48
123
+
Ala
CGC
[ENA]
¢þ
>C181051534
CP021354
Actinomycetota
Rhodococcus oxybenzonivorans S2-17 [CP021354]
4955619
4955544
-
Ala
CGC
-
¡û
>C181060851
CP022208
Actinomycetota
Rhodococcus pyridinivorans TG9 [CP022208]
1628931
1629005
+
Ala
CGC
-
¡û
>C181074111
CP022915
Actinomycetota
Rhodococcus pyridinivorans GF3 [CP022915]
5102125
5102051
-
Ala
CGC
-
¡û
>C181089280
CP023720
Actinomycetota
Rhodococcus sp. H-CA8f [CP023720]
1721438
1721513
+
Ala
CGC
-
¡û
>C181099301
CP024315
Actinomycetota
Rhodococcus ruber P14 [CP024315]
4834338
4834413
+
Ala
CGC
-
¡û
>C181107759
CP024890
Actinomycetota
Rhodococcus ruber YYL [CP024890]
1416652
1416577
-
Ala
CGC
-
¡û
>C181124600
CP025959
Actinomycetota
Rhodococcus qingshengii djl-6-2 [CP025959]
4752666
4752591
-
Ala
CGC
-
¡û
>C181160018
CP027793
Actinomycetota
Prescottella equi DSSKP-R-001 [CP027793]
1398624
1398698
+
Ala
CGC
-
¡û
>C181175130
CP029146
Actinomycetota
Rhodococcus ruber SD3 [CP029146]
1222597
1222672
+
Ala
CGC
-
¡û
>C181215435
LS483468
Actinomycetota
Rhodococcus coprophilus NCTC10994 [LS483468]
1838592
1838517
-
Ala
CGC
-
¡û
>C181224999
LT906450
Actinomycetota
Rhodococcus rhodochrous NCTC10210 [LT906450]
1120670
1120744
+
Ala
CGC
-
¡û
>C191025686
CP023714
Actinomycetota
Rhodococcus ruber YC-YT1 [CP023714]
1522896
1522971
+
Ala
CGC
-
¡û
>C191120354
CP034152
Actinomycetota
Rhodococcus sp. NJ-530 [CP034152]
4714957
4714882
-
Ala
CGC
-
¡û
>C191139067
CP035319
Actinomycetota
Rhodococcus sp. ABRD24 [CP035319]
3966021
3966096
+
Ala
CGC
-
¡û
>C191157576
CP038030
Actinomycetota
Rhodococcus ruber R1 [CP038030]
1227305
1227380
+
Ala
CGC
-
¡û
>C191165989
CP039432
Actinomycetota
Rhodococcus sp. SGAir0479 [CP039432]
390594
390669
+
Ala
CGC
-
¡û
>C191182130
CP040719
Actinomycetota
Rhodococcus pyridinivorans YF3 [CP040719]
919618
919692
+
Ala
CGC
-
¡û
>W141702551
JMLO01000007
Actinomycetota
Rhodococcus sp. UNC363MFTsu5.1 [JMLO]
7605
7680
+
Ala
CGC
[ENA]
¡û
>W141727248
JNCU01000007
Actinomycetota
Rhodococcus qingshengii [JNCU]
35281
35206
-
Ala
CGC
[ENA]
¡û
>W141755688
JNWS01000007
Actinomycetota
Rhodococcus rhodochrous [JNWS]
437204
437279
+
Ala
CGC
[ENA]
¡û
>W141773433
JOIL01000009
Actinomycetota
Rhodococcus erythropolis [JOIL]
233384
233309
-
Ala
CGC
[ENA]
¡û
>W141773465
JOIM01000002
Actinomycetota
Rhodococcus opacus [JOIM]
509438
509513
+
Ala
CGC
[ENA]
¡û
>W141807024
JPOC01000079
Actinomycetota
Prescottella defluvii [JPOC]
94
19
-
Ala
CGC
[ENA]
¡û
>W09132200
ACNO01000121
Actinomycetota
Rhodococcus erythropolis SK121 [ACNO]
97050
97125
+
Ala
CGC
[ENA]
¡û
>C09108736
AP008957
Actinomycetota
Rhodococcus erythropolis PR4 [AP008957]
4819521
4819446
-
Ala
CGC
[Ensembl]
¡û
>C09108930
AP011115
Actinomycetota
Rhodococcus opacus B4 [AP011115]
6229880
6229955
+
Ala
CGC
[Ensembl]
¡û
>W1910128898
BHXB01000001
Actinomycetota
Rhodococcus erythropolis JCM 3201 [BHXB]
4645071
4644996
-
Ala
CGC
[ENA]
¡û
>W1910129207
BHYM01000002
Actinomycetota
Rhodococcus wratislaviensis C31-06 [BHYM]
166681
166756
+
Ala
CGC
[ENA]
¡û
>W1910182889
BJNG01000020
Actinomycetota
Pseudonocardia hydrocarbonoxydans NBRC 14498 [BJNG]
18136
18210
+
Ala
CGC
[ENA]
¡û
>C141001839
CP003761
Actinomycetota
Rhodococcus erythropolis CCM2595 [CP003761]
4543901
4543826
-
Ala
CGC
[Ensembl]
¡û
>C141011363
CP006996
Actinomycetota
Rhodococcus pyridinivorans SB3094 [CP006996]
4523219
4523294
+
Ala
CGC
[Ensembl]
¡û
>W1910584623
JXXO01000193
Actinomycetota
Rhodococcus ruber OA1 [JXXO]
1180
1255
+
Ala
CGC
[ENA]
¡û
>W1910637680
LQWU01000011
Actinomycetota
Rhodococcus erythropolis B7g [LQWU]
423302
423377
+
Ala
CGC
[ENA]
¡û
>W1910792736
MRCL01000009
Actinomycetota
Rhodococcus erythropolis ACN1 [MRCL]
35229
35154
-
Ala
CGC
[ENA]
¡û
>W1910888412
NERM01000026
Actinomycetota
Rhodococcus sp. BUPNP1 [NERM]
38684
38758
+
Ala
CGC
[ENA]
¡û
>W1910910545
NHBD01000014
Actinomycetota
Rhodococcus erythropolis AV96 [NHBD]
109772
109697
-
Ala
CGC
[ENA]
¡û
>W1910910664
NHML01000021
Actinomycetota
Rhodococcus sp. NCIMB 12038 [NHML]
8856
8930
+
Ala
CGC
[ENA]
¡û
>W1911136549
NOVD01000023
Actinomycetota
Rhodococcus qingshengii 23b-28 [NOVD]
3696
3621
-
Ala
CGC
[ENA]
¡û
>W1911155403
NPJZ01000001
Actinomycetota
Rhodococcus sp. OK302 [NPJZ]
5829405
5829331
-
Ala
CGC
[ENA]
¡û
>W1911239593
NSDX01000001
Actinomycetota
Rhodococcus sp. ACPA1 [NSDX]
320116
320191
+
Ala
CGC
[ENA]
¡û
>W1911239689
NSDY01000002
Actinomycetota
Rhodococcus sp. ACPA4 [NSDY]
916906
916981
+
Ala
CGC
[ENA]
¡û
>W1911239708
NSDZ01000002
Actinomycetota
Rhodococcus sp. ACS1 [NSDZ]
369534
369459
-
Ala
CGC
[ENA]
¡û
>W1911398332
NWMZ01000001
Actinomycetota
Rhodococcus opacus DSM 44186 [NWMZ]
1772456
1772381
-
Ala
CGC
[ENA]
¡û
>W1911492045
OBDL01000011
Actinomycetota
Rhodococcus sp. OK270 [OBDL]
8022
8097
+
Ala
CGC
[ENA]
¡û
>W1911647290
QAJJ01000009
Actinomycetota
Rhodococcus sp. KBW08 [QAJJ]
34861
34786
-
Ala
CGC
[ENA]
¡û
>W1810050280
PCZU01000311
Actinomycetota
Rhodococcus sp. ENV425 [PCZU]
21811
21886
+
Ala
CGC
[ENA]
¡û
>W1810330050
PUIO01000004
Actinomycetota
Rhodococcus opacus 04-OD7 [PUIO]
179668
179593
-
Ala
CGC
[ENA]
¡û
>W1810367256
PVXK01000001
Actinomycetota
Rhodococcus rhodochrous EP4 [PVXK]
2614440
2614366
-
Ala
CGC
[ENA]
¡û
>W1810402539
PYHL01000003
Actinomycetota
Rhodococcus sp. AD45-ID [PYHL]
862762
862837
+
Ala
CGC
[ENA]
¡û
>W1810477522
QAOW01000002
Actinomycetota
Rhodococcus sp. OK519 [QAOW]
355425
355352
-
Ala
CGC
[ENA]
¡û
>W1810477676
QAOZ01000010
Actinomycetota
Rhodococcus sp. OK611 [QAOZ]
229172
229097
-
Ala
CGC
[ENA]
¡û
>W1810577255
QEOC01000001
Actinomycetota
Rhodococcus globerulus WS3306 [QEOC]
4915265
4915190
-
Ala
CGC
[ENA]
¡û
>W1810582402
QEUH01000004
Actinomycetota
Rhodococcus sp. AQ5-07 [QEUH]
350682
350607
-
Ala
CGC
[ENA]
¡û
>W1810762955
QQAT01000001
Actinomycetota
Rhodococcus sp. AG1013 [QQAT]
146521
146594
+
Ala
CGC
[ENA]
¡û
>W1810861092
QTTP01000001
Actinomycetota
Rhodococcus wratislaviensis WS3308 [QTTP]
2346648
2346573
-
Ala
CGC
[ENA]
¡û
>W1810870046
QUAI01000001
Actinomycetota
Rhodococcus erythropolis ATCC 15903 [QUAI]
6360168
6360243
+
Ala
CGC
[ENA]
¡û
>W1810885251
QUNE01000002
Actinomycetota
Rhodococcus sp. OK551 [QUNE]
262416
262341
-
Ala
CGC
[ENA]
¡û
>C151005047
CP003949
Actinomycetota
Rhodococcus opacus PD630 [CP003949]
2376181
2376256
+
Ala
CGC
[Ensembl]
¡û
>C151079139
CP011295
Actinomycetota
Rhodococcus erythropolis BG43 [CP011295]
4573911
4573836
-
Ala
CGC
[Ensembl]
¡û
>C151080801
CP011341
Actinomycetota
Rhodococcus aetherivorans IcdP1 [CP011341]
1498945
1499020
+
Ala
CGC
[Ensembl]
¡û
>W1510001783
AZYO01000009
Actinomycetota
Rhodococcus rhodochrous KG-21 [AZYO]
110072
109997
-
Ala
CGC
[ENA]
¡û
>W1510020105
BBXP01000008
Actinomycetota
Rhodococcus rhodochrous NBRC 16069 [BBXP]
68225
68150
-
Ala
CGC
[ENA]
¡û
>W1510053319
CCSD01000097
Actinomycetota
Rhodococcus ruber [CCSD]
19224
19299
+
Ala
CGC
[ENA]
¡û
>W1510091157
CEDU01000022
Actinomycetota
Rhodococcus globerulus 4J2A2 [CEDU]
14655
14730
+
Ala
CGC
[ENA]
¡û
>W10116566
ADNW01000049
Actinomycetota
Prescottella equi ATCC 33707 [ADNW]
68869
68794
-
Ala
CGC
[ENA]
¡û
>W1510115808
CFHW01000075
Actinomycetota
Rhodococcus sp. 311R [CFHW]
752
677
-
Ala
CGC
[ENA]
¡û
>C10112495
CP001958
Actinomycetota
Segniliparus rotundus DSM 44985 [CP001958]
483787
483712
-
Ala
CGC
[Ensembl]
¡û
>W1510649776
CVQP01000001
Actinomycetota
Rhodococcus sp. RD6.2 [CVQP]
277127
277202
+
Ala
CGC
[ENA]
¡û
>W11109743
ACZI01000146
Actinomycetota
Segniliparus rugosus ATCC BAA-974 [ACZI]
15050
14977
-
Ala
CGC
[ENA]
¡û
>W1511303405
JPJJ01000014
Actinomycetota
Rhodococcus sp. p52 [JPJJ]
38369
38444
+
Ala
CGC
[ENA]
¡û
>W1511401626
JTIZ01000006
Actinomycetota
Rhodococcus sp. Chr-9 [JTIZ]
38461
38536
+
Ala
CGC
[ENA]
¡û
>W11121232
ADNW02000018
Actinomycetota
Prescottella equi ATCC 33707 [ADNW]
68870
68795
-
Ala
CGC
[ENA]
¡û
>W1511480875
JWJL01000377
Actinomycetota
Rhodococcus erythropolis S-43 [JWJL]
692
617
-
Ala
CGC
[ENA]
¡û
>W1511535434
JYOP01000003
Actinomycetota
Rhodococcus sp. AD45 [JYOP]
862655
862730
+
Ala
CGC
[ENA]
¡û
>W1511583118
LATQ01000001
Actinomycetota
Rhodococcus sp. IITR03 [LATQ]
2121647
2121722
+
Ala
CGC
[ENA]
¡û
>W1511639818
LDPN01000106
Actinomycetota
Rhodococcus erythropolis CAS922i [LDPN]
35605
35530
-
Ala
CGC
[ENA]
¡û
>W1511640444
LDUF01000003
Actinomycetota
Rhodococcus ruber P25 [LDUF]
370417
370342
-
Ala
CGC
[ENA]
¡û
>W1511656569
LEKE01000031
Actinomycetota
Rhodococcus sp. ARP2 [LEKE]
719
644
-
Ala
CGC
[ENA]
¡û
>W11155968
AFAQ01001924
Actinomycetota
Rhodococcus sp. R04 [AFAQ]
65665
65590
-
Ala
CGC
[ENA]
¡û
>W11177969
AGCF01000001
Actinomycetota
Rhodococcus erythropolis XP [AGCF]
611678
611603
-
Ala
CGC
[ENA]
¡û
>C121015979
FN563149
Actinomycetota
Prescottella equi 103S [FN563149]
1230155
1230230
+
Ala
CGC
[Ensembl]
¡û
>C161005701
CP007255
Actinomycetota
Rhodococcus erythropolis R138 [CP007255]
2360141
2360216
+
Ala
CGC
[Ensembl]
¡û
>C161019842
CP008947
Actinomycetota
Rhodococcus opacus R7 [CP008947]
2715234
2715159
-
Ala
CGC
-
¡û
>C161045418
CP012749
Actinomycetota
Rhodococcus sp. 008 [CP012749]
477711
477636
-
Ala
CGC
[Ensembl]
¡û
>W121020597
AGVD01000011
Actinomycetota
Rhodococcus opacus PD630 [AGVD]
28309
28384
+
Ala
CGC
[ENA]
¡û
>W121021564
AGVW02000047
Actinomycetota
Rhodococcus rhodochrous BKS6-46 [AGVW]
9535
9460
-
Ala
CGC
[ENA]
¡û
>W121024667
AHBW01000054
Actinomycetota
Rhodococcus pyridinivorans AK37 [AHBW]
103813
103888
+
Ala
CGC
[ENA]
¡û
>W121060039
AJFC01000084
Actinomycetota
Rhodococcus sp. P14 [AJFC]
8200
8125
-
Ala
CGC
[ENA]
¡û
>W121068641
AJVB01000033
Actinomycetota
Rhodococcus sp. R1101 [AJVB]
17117
17192
+
Ala
CGC
[ENA]
¡û
>W121071638
AJYC01000637
Actinomycetota
Rhodococcus opacus M213 [AJYC]
5225
5300
+
Ala
CGC
[ENA]
¡û
>W121086883
AKKP01000107
Actinomycetota
Rhodococcus sp. JVH1 [AKKP]
6499
6574
+
Ala
CGC
[ENA]
¡û
>W1610040505
AZXY01000005
Actinomycetota
Rhodococcus pyridinivorans KG-16 [AZXY]
333657
333732
+
Ala
CGC
[ENA]
¡û
>W1610045478
BBBO01000413
Actinomycetota
Rhodococcus baikonurensis JCM 18801 [BBBO]
2639
2714
+
Ala
CGC
[ENA]
¡û
>W1610048672
BBEG01000539
Actinomycetota
Rhodococcus sp. JCM 9791 [BBEG]
2436
2511
+
Ala
CGC
[ENA]
¡û
>W1610048720
BBEH01000588
Actinomycetota
Rhodococcus sp. JCM 9793 [BBEH]
2366
2441
+
Ala
CGC
[ENA]
¡û
>W1610048817
BBEK01000132
Actinomycetota
Rhodococcus erythropolis JCM 9803 [BBEK]
973
898
-
Ala
CGC
[ENA]
¡û
>W1610048869
BBEL01000146
Actinomycetota
Rhodococcus erythropolis JCM 9805 [BBEL]
718
643
-
Ala
CGC
[ENA]
¡û
>W1610049334
BBEW01000034
Actinomycetota
Rhodococcus sp. HA99 [BBEW]
16597
16522
-
Ala
CGC
[ENA]
¡û
>W1610050104
BBFM01000160
Actinomycetota
Rhodococcus erythropolis JCM 9804 [BBFM]
8419
8494
+
Ala
CGC
[ENA]
¡û
>W1610050176
BBFO01001567
Actinomycetota
Rhodococcus opacus RKJ300 = JCM 13270 [BBFO]
519
594
+
Ala
CGC
[ENA]
¡û
>W1610050557
BBFZ01000579
Actinomycetota
Rhodococcus sp. JCM 3009 [BBFZ]
1087
1012
-
Ala
CGC
[ENA]
¡û
>W1610050813
BBGF01001658
Actinomycetota
Rhodococcus koreensis JCM 10743 = NBRC 100607 [BBGF]
367
442
+
Ala
CGC
[ENA]
¡û
>W1610050865
BBGG01001371
Actinomycetota
Rhodococcus pyridinivorans JCM 10940 = NBRC 100608 [BBGG]
312
387
+
Ala
CGC
[ENA]
¡û
>W1610068577
BCRL01000012
Actinomycetota
Prescottella equi NBRC 101255 = C 7 [BCRL]
200626
200701
+
Ala
CGC
[ENA]
¡û
>W1610068659
BCRM01000035
Actinomycetota
Rhodococcus erythropolis NBRC 15567 [BCRM]
19359
19434
+
Ala
CGC
[ENA]
¡û
>W1610068694
BCRN01000010
Actinomycetota
Millisia brevis NBRC 105863 [BCRN]
201606
201681
+
Ala
CGC
[ENA]
¡û
>W1610069076
BCRU01000040
Actinomycetota
Smaragdicoccus niigatensis DSM 44881 = NBRC 103563 [BCRU]
20536
20611
+
Ala
CGC
[ENA]
¡û
>W1610069107
BCRV01000010
Actinomycetota
Skermania piniformis NBRC 15059 [BCRV]
177126
177053
-
Ala
CGC
[ENA]
¡û
>W1610073945
BCWH01000002
Actinomycetota
Rhodococcus sp. YH3-3 [BCWH]
1483699
1483774
+
Ala
CGC
[ENA]
¡û
>W1610082661
BDGK01000017
Actinomycetota
Rhodococcus sp. Br-6 [BDGK]
635325
635252
-
Ala
CGC
[ENA]
¡û
>W1610187935
FBUK01000089
Actinomycetota
Rhodococcus rhodochrous [FBUK]
127483
127408
-
Ala
CGC
[ENA]
¡û
>W1610515494
FMBB01000001
Actinomycetota
Rhodococcus qingshengii enclensis [FMBB]
243767
243692
-
Ala
CGC
[ENA]
¡û
>W1610617047
LGSV01000194
Actinomycetota
Rhodococcus opacus jostii [LGSV]
7847
7922
+
Ala
CGC
[ENA]
¡û
>W1610650034
LJIS01000129
Actinomycetota
Rhodococcus sp. ADH [LJIS]
233854
233779
-
Ala
CGC
[ENA]
¡û
>W1610749626
LNAK01000043
Actinomycetota
Rhodococcus sp. KB6 [LNAK]
840897
840972
+
Ala
CGC
[ENA]
¡û
>W1610759643
LNIU01000007
Actinomycetota
Prescottella equi [LNIU]
615459
615534
+
Ala
CGC
[ENA]
¡û
>W1610767501
LNQH01000002
Actinomycetota
Rhodococcus qingshengii enclensis [LNQH]
739
664
-
Ala
CGC
[ENA]
¡û
>W1610849570
LPZM01000071
Actinomycetota
Rhodococcus sp. AJR001 [LPZM]
107397
107322
-
Ala
CGC
[ENA]
¡û
>W1610849614
LPZN01000044
Actinomycetota
Rhodococcus gordoniae [LPZN]
146043
145968
-
Ala
CGC
[ENA]
¡û
>W1610890821
LRQY01000015
Actinomycetota
Prescottella equi [LRQY]
284977
285052
+
Ala
CGC
[ENA]
¡û
>W1610890900
LRQZ01000113
Actinomycetota
Prescottella equi [LRQZ]
7720
7645
-
Ala
CGC
[ENA]
¡û
>W1610890941
LRRA01000037
Actinomycetota
Prescottella equi [LRRA]
185646
185721
+
Ala
CGC
[ENA]
¡û
>W1610890991
LRRB01000140
Actinomycetota
Aldersonia kunmingensis [LRRB]
66445
66370
-
Ala
CGC
[ENA]
¡û
>W1610891167
LRRF01000094
Actinomycetota
Prescottella equi [LRRF]
15592
15667
+
Ala
CGC
[ENA]
¡û
>W1610891204
LRRG01000052
Actinomycetota
Rhodococcus opacus [LRRG]
10038
10113
+
Ala
CGC
[ENA]
¡û
>W1610891262
LRRH01000056
Actinomycetota
Rhodococcus phenolicus [LRRH]
2135
2060
-
Ala
CGC
[ENA]
¡û
>W1610891324
LRRI01000067
Actinomycetota
Rhodococcus pyridinivorans [LRRI]
24544
24619
+
Ala
CGC
[ENA]
¡û
>W1610891352
LRRJ01000015
Actinomycetota
Rhodococcus qingshengii [LRRJ]
352354
352429
+
Ala
CGC
[ENA]
¡û
>W1610891411
LRRK01000014
Actinomycetota
Rhodococcus rhodochrous [LRRK]
18903
18978
+
Ala
CGC
[ENA]
¡û
>W1610891446
LRRL01000006
Actinomycetota
Rhodococcus ruber [LRRL]
55579
55504
-
Ala
CGC
[ENA]
¡û
>W1610905864
LSBM01000090
Actinomycetota
Rhodococcus sp. SC4 [LSBM]
6885
6960
+
Ala
CGC
[ENA]
¡û
>W1610925608
LTCZ01000127
Actinomycetota
Rhodococcus sp. LB1 [LTCZ]
3422
3347
-
Ala
CGC
[ENA]
¡û
>W1610940442
LUTX01000005
Actinomycetota
Rhodococcus sp. HS-D2 [LUTX]
38418
38493
+
Ala
CGC
[ENA]
¡û
>W1610949380
LVCT01000031
Actinomycetota
Rhodococcus sp. EPR-134 [LVCT]
8077
8152
+
Ala
CGC
[ENA]
¡û
>W1610978054
LVXC01000002
Actinomycetota
Rhodococcus qingshengii [LVXC]
2297964
2298039
+
Ala
CGC
[ENA]
¡û
>W1611023786
LYXB01000001
Actinomycetota
Rhodococcus qingshengii [LYXB]
180727
180652
-
Ala
CGC
[ENA]
¡û
>W1611040952
LZMJ01000038
Actinomycetota
Rhodococcus sp. 852002-51564_SCH6189132-a [LZMJ]
107292
107217
-
Ala
CGC
[ENA]
¡û
>W1710037619
AZXY01000005
Actinomycetota
Rhodococcus pyridinivorans KG-16 [AZXY]
333657
333732
+
Ala
CGC
[ENA]
¡û
>W1710042319
BBBO01000413
Actinomycetota
Rhodococcus baikonurensis JCM 18801 [BBBO]
2639
2714
+
Ala
CGC
[ENA]
¡û
>W1710045144
BBEG01000539
Actinomycetota
Rhodococcus sp. JCM 9791 [BBEG]
2436
2511
+
Ala
CGC
[ENA]
¡û
>W1710045192
BBEH01000588
Actinomycetota
Rhodococcus sp. JCM 9793 [BBEH]
2366
2441
+
Ala
CGC
[ENA]
¡û
>W1710045289
BBEK01000132
Actinomycetota
Rhodococcus erythropolis JCM 9803 [BBEK]
973
898
-
Ala
CGC
[ENA]
¡û
>W1710045341
BBEL01000146
Actinomycetota
Rhodococcus erythropolis JCM 9805 [BBEL]
718
643
-
Ala
CGC
[ENA]
¡û
>W1710045733
BBEW01000034
Actinomycetota
Rhodococcus sp. HA99 [BBEW]
16597
16522
-
Ala
CGC
[ENA]
¡û
>W1710046503
BBFM01000160
Actinomycetota
Rhodococcus erythropolis JCM 9804 [BBFM]
8419
8494
+
Ala
CGC
[ENA]
¡û
>W1710046575
BBFO01001567
Actinomycetota
Rhodococcus opacus RKJ300 = JCM 13270 [BBFO]
519
594
+
Ala
CGC
[ENA]
¡û
>W1710046956
BBFZ01000579
Actinomycetota
Rhodococcus sp. JCM 3009 [BBFZ]
1087
1012
-
Ala
CGC
[ENA]
¡û
>W1710047212
BBGF01001658
Actinomycetota
Rhodococcus koreensis JCM 10743 = NBRC 100607 [BBGF]
367
442
+
Ala
CGC
[ENA]
¡û
>W1710047264
BBGG01001371
Actinomycetota
Rhodococcus pyridinivorans JCM 10940 = NBRC 100608 [BBGG]
312
387
+
Ala
CGC
[ENA]
¡û
>W1710065950
BCRL01000012
Actinomycetota
Prescottella equi NBRC 101255 = C 7 [BCRL]
200626
200701
+
Ala
CGC
[ENA]
¡û
>W1710066032
BCRM01000035
Actinomycetota
Rhodococcus erythropolis NBRC 15567 [BCRM]
19359
19434
+
Ala
CGC
[ENA]
¡û
>W1710066067
BCRN01000010
Actinomycetota
Millisia brevis NBRC 105863 [BCRN]
201606
201681
+
Ala
CGC
[ENA]
¡û
>W1710066449
BCRU01000040
Actinomycetota
Smaragdicoccus niigatensis DSM 44881 = NBRC 103563 [BCRU]
20536
20611
+
Ala
CGC
[ENA]
¡û
>W1710066480
BCRV01000010
Actinomycetota
Skermania piniformis NBRC 15059 [BCRV]
177126
177053
-
Ala
CGC
[ENA]
¡û
>W1710071063
BCWH01000002
Actinomycetota
Rhodococcus sp. YH3-3 [BCWH]
1483699
1483774
+
Ala
CGC
[ENA]
¡û
>W1710071848
BCWX01000003
Actinomycetota
Rhodococcus globerulus NBRC 14531 [BCWX]
721644
721719
+
Ala
CGC
[ENA]
¡û
>W1710071879
BCWY01000014
Actinomycetota
Rhodococcus jostii NBRC 16295 [BCWY]
6934
7009
+
Ala
CGC
[ENA]
¡û
>W1710071933
BCWZ01000019
Actinomycetota
Rhodococcus koreensis JCM 10743 = NBRC 100607 [BCWZ]
227711
227636
-
Ala
CGC
[ENA]
¡û
>W1710072015
BCXA01000075
Actinomycetota
Rhodococcus maanshanensis NBRC 100610 [BCXA]
1182
1107
-
Ala
CGC
[ENA]
¡û
>W1710072041
BCXB01000014
Actinomycetota
Rhodococcus marinonascens NBRC 14363 [BCXB]
70424
70349
-
Ala
CGC
[ENA]
¡û
>W1710072113
BCXC01000014
Actinomycetota
Rhodococcus pyridinivorans JCM 10940 = NBRC 100608 [BCXC]
39067
39142
+
Ala
CGC
[ENA]
¡û
>W1710072177
BCXE01000010
Actinomycetota
Rhodococcus ruber NBRC 15591 [BCXE]
143706
143781
+
Ala
CGC
[ENA]
¡û
>W1710072239
BCXF01000007
Actinomycetota
Rhodococcus triatomae NBRC 103116 [BCXF]
247587
247512
-
Ala
CGC
[ENA]
¡û
>W1710072319
BCXG01000046
Actinomycetota
Rhodococcus tukisamuensis NBRC 100609 [BCXG]
16790
16865
+
Ala
CGC
[ENA]
¡û
>W1710072374
BCXI01000010
Actinomycetota
Rhodococcus zopfii NBRC 100606 = JCM 9919 [BCXI]
231114
231189
+
Ala
CGC
[ENA]
¡û
>W1710076502
BDAM01000004
Actinomycetota
Rhodococcus coprophilus NBRC 100603 [BDAM]
35991
36066
+
Ala
CGC
[ENA]
¡û
>W1710081835
BDGK01000017
Actinomycetota
Rhodococcus sp. Br-6 [BDGK]
635325
635252
-
Ala
CGC
[ENA]
¡û
>W1710083003
BDIV01000002
Actinomycetota
Rhodococcus sp. Br-6 [BDIV]
389282
389209
-
Ala
CGC
[ENA]
¡û
>W1710189551
FBUK01000089
Actinomycetota
Rhodococcus rhodochrous [FBUK]
127483
127408
-
Ala
CGC
[ENA]
¡û
>W1710501184
FMBB01000001
Actinomycetota
Rhodococcus qingshengii enclensis [FMBB]
243767
243692
-
Ala
CGC
[ENA]
¡û
>W1710507166
FMVB01000001
Actinomycetota
Rhodococcus erythropolis 164Chir2E [FMVB]
376759
376834
+
Ala
CGC
[ENA]
¡û
>W1710513324
FNAB01000001
Actinomycetota
Rhodococcus tukisamuensis [FNAB]
954028
954103
+
Ala
CGC
[ENA]
¡û
>W1710517700
FNDN01000001
Actinomycetota
Rhodococcus triatomae [FNDN]
382443
382368
-
Ala
CGC
[ENA]
¡û
>W1710534531
FNRX01000002
Actinomycetota
Rhodococcus pyridinivorans [FNRX]
4390813
4390738
-
Ala
CGC
[ENA]
¡û
>W1710535892
FNSV01000005
Actinomycetota
Rhodococcus koreensis [FNSV]
2495892
2495817
-
Ala
CGC
[ENA]
¡û
>W1710536817
FNTL01000004
Actinomycetota
Rhodococcus jostii [FNTL]
6870437
6870512
+
Ala
CGC
[ENA]
¡û
>W1710544541
FOAW01000036
Actinomycetota
Rhodococcus maanshanensis [FOAW]
37631
37556
-
Ala
CGC
[ENA]
¡û
>W1710608405
FXAV01000004
Actinomycetota
Rhodococcus rhodochrous J3 [FXAV]
404201
404126
-
Ala
CGC
[ENA]
¡û
>W1710622272
JNVR01000110
Actinomycetota
Rhodococcus rhodochrous [JNVR]
12475
12400
-
Ala
CGC
[ENA]
¡û
>W1710742661
LGSV01000194
Actinomycetota
Rhodococcus opacus jostii [LGSV]
7847
7922
+
Ala
CGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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