This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.237438 (21 seq.)
>WENV181981424
OHAG01002178
[OHAG] human gut metagenome; faeces
11254
11180
-
Arg
ACG
[ENA]
¡û
>CHL1810010354
KF534478
Viridiplantae
Haloxylon ammodendron (KF534478)
106471
106545
+
Arg
ACG
[ENA]
¡û
>CHL1810010360
KF534478
Viridiplantae
Haloxylon ammodendron (KF534478)
129314
129240
-
Arg
ACG
[ENA]
¡û
>CHL1810010843
KF861575
Rhodophyta
Gracilaria salicornia (KF861575)
39146
39219
+
Arg
ACG
[ENA]
¡û
>CHL1810015572
KM527890
Viridiplantae
Pelargonium exhibens (KM527890)
104738
104812
+
Arg
ACG
[ENA]
¡û
>CHL1810015576
KM527890
Viridiplantae
Pelargonium exhibens (KM527890)
140558
140484
-
Arg
ACG
[ENA]
¡û
>CHL1810015599
KM527891
Viridiplantae
Pelargonium echinatum (KM527891)
110384
110458
+
Arg
ACG
[ENA]
¡û
>CHL1810015602
KM527891
Viridiplantae
Pelargonium echinatum (KM527891)
146993
146919
-
Arg
ACG
[ENA]
¡û
>CHL1810015678
KM527894
Viridiplantae
Pelargonium incrassatum (KM527894)
113592
113666
+
Arg
ACG
[ENA]
¡û
>CHL1810015681
KM527894
Viridiplantae
Pelargonium incrassatum (KM527894)
149921
149847
-
Arg
ACG
[ENA]
¡û
>CHL1810015813
KM527899
Viridiplantae
Pelargonium tetragonum (KM527899)
106582
106656
+
Arg
ACG
[ENA]
¡û
>CHL1810015817
KM527899
Viridiplantae
Pelargonium tetragonum (KM527899)
142010
141936
-
Arg
ACG
[ENA]
¡û
>CHL1810015840
KM527900
Viridiplantae
Pelargonium transvaalense (KM527900)
219772
219846
+
Arg
ACG
[ENA]
¡û
>CHL1810015847
KM527900
Viridiplantae
Pelargonium transvaalense (KM527900)
83178
83104
-
Arg
ACG
[ENA]
¡û
>CHL1810019706
KT070881
Viridiplantae
Viscum crassulae (KT070881)
94374
94448
+
Arg
ACG
[ENA]
¡û
>CHL1810019712
KT070881
Viridiplantae
Viscum crassulae (KT070881)
104915
104841
-
Arg
ACG
[ENA]
¡û
>CHL1810022027
KT692739
Viridiplantae
Monsonia marlothii (KT692739)
108925
108851
-
Arg
ACG
[ENA]
¡û
>CHL1810036810
KX826832
Viridiplantae
Salpinga maranonensis (KX826832)
108069
108143
+
Arg
ACG
[ENA]
¡û
>CHL1810036816
KX826832
Viridiplantae
Salpinga maranonensis (KX826832)
130371
130297
-
Arg
ACG
[ENA]
¡û
>CHL1810046634
KY996492
Viridiplantae
Taxillus chinensis (KY996492)
90887
90961
+
Arg
ACG
[ENA]
¡û
>CHL1810046640
KY996492
Viridiplantae
Taxillus chinensis (KY996492)
100834
100760
-
Arg
ACG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK