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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.237792 (281 seq.)
>W1710822183
LKUR01000017
Actinomycetota
Bifidobacterium bifidum [LKUR]
45517
45594
+
Arg
CCT
[ENA]
¡û
>W131043439
AMPL01000008
Actinomycetota
Bifidobacterium bifidum LMG 13195 [AMPL]
10761
10838
+
Arg
CCT
[ENA]
¡û
>W131043504
AMPM01000166
Actinomycetota
Bifidobacterium bifidum IPLA 20015 [AMPM]
2438
2361
-
Arg
CCT
[ENA]
¡û
>W1711048175
LRPK01000025
Actinomycetota
Alloscardovia omnicolens [LRPK]
133257
133182
-
Arg
CCT
[ENA]
¡û
>W1711048308
LRPO01000013
Actinomycetota
Bifidobacterium bifidum [LRPO]
21749
21826
+
Arg
CCT
[ENA]
¡û
>W1711082538
LSUI01000001
Actinomycetota
Bifidobacterium bifidum [LSUI]
124186
124263
+
Arg
CCT
[ENA]
¡û
>W1711082643
LSUL01000002
Actinomycetota
Bifidobacterium bifidum [LSUL]
130137
130060
-
Arg
CCT
[ENA]
¡û
>W1711111708
LTWS01000020
Actinomycetota
Alloscardovia sp. HMSC034E08 [LTWS]
3569
3644
+
Arg
CCT
[ENA]
¡û
>W131215501
ATVB01000006
Actinomycetota
Alloscardovia omnicolens DSM 21503 [ATVB]
49561
49486
-
Arg
CCT
[ENA]
¡û
>W1711577700
MNQB01000005
Actinomycetota
Bifidobacterium bifidum [MNQB]
59552
59475
-
Arg
CCT
[ENA]
¡û
>W1711938019
NAQK01000002
Actinomycetota
Bifidobacterium bifidum [NAQK]
291838
291761
-
Arg
CCT
[ENA]
¡û
>W1711959074
NBYL01000001
Actinomycetota
Bifidobacterium bifidum [NBYL]
412143
412220
+
Arg
CCT
[ENA]
¡û
>WENV180127995
OATA01018995
[OATA] human gut metagenome; faeces
306
383
+
Arg
CCT
[ENA]
¢þ
>WENV180128483
OATB01000188
[OATB] human gut metagenome; faeces
50600
50523
-
Arg
CCT
[ENA]
¢þ
>WENV180132223
OATH01002907
[OATH] human gut metagenome; faeces
297
374
+
Arg
CCT
[ENA]
¢þ
>WENV180136507
OATN01000037
[OATN] human gut metagenome; faeces
19917
19994
+
Arg
CCT
[ENA]
¢þ
>WENV180137068
OATO01000182
[OATO] human gut metagenome; faeces
11214
11291
+
Arg
CCT
[ENA]
¢þ
>WENV180141945
OATV01000221
[OATV] human gut metagenome; faeces
22753
22676
-
Arg
CCT
[ENA]
¢þ
>WENV180142588
OATW01001913
[OATW] human gut metagenome; faeces
569
646
+
Arg
CCT
[ENA]
¢þ
>WENV180147202
OAUG01002944
[OAUG] human gut metagenome; faeces
786
709
-
Arg
CCT
[ENA]
¢þ
>WENV180147706
OAUH01002169
[OAUH] human gut metagenome; faeces
575
498
-
Arg
CCT
[ENA]
¢þ
>WENV180149210
OAUK01032196
[OAUK] human gut metagenome; faeces
429
352
-
Arg
CCT
[ENA]
¢þ
>WENV180151969
OAUP01000890
[OAUP] human gut metagenome; faeces
2289
2366
+
Arg
CCT
[ENA]
¢þ
>WENV180153097
OAUR01000745
[OAUR] human gut metagenome; faeces
2609
2686
+
Arg
CCT
[ENA]
¢þ
>WENV180157447
OAUX01000043
[OAUX] human gut metagenome; faeces
4375
4452
+
Arg
CCT
[ENA]
¢þ
>WENV180162635
OAVH01000012
[OAVH] human gut metagenome; faeces
99544
99621
+
Arg
CCT
[ENA]
¢þ
>WENV180163728
OAVI01000257
[OAVI] human gut metagenome; faeces
598
675
+
Arg
CCT
[ENA]
¢þ
>WENV180165087
OAVK01000049
[OAVK] human gut metagenome; faeces
19891
19968
+
Arg
CCT
[ENA]
¢þ
>WENV180165700
OAVL01000003
[OAVL] human gut metagenome; faeces
421886
421963
+
Arg
CCT
[ENA]
¢þ
>WENV180169147
OAVS01001127
[OAVS] human gut metagenome; faeces
9342
9265
-
Arg
CCT
[ENA]
¢þ
>WENV180171186
OAVW01000002
[OAVW] human gut metagenome; faeces
44870
44793
-
Arg
CCT
[ENA]
¢þ
>WENV180171971
OAVX01000123
[OAVX] human gut metagenome; faeces
12201
12124
-
Arg
CCT
[ENA]
¢þ
>WENV180172727
OAVY01000002
[OAVY] human gut metagenome; faeces
338603
338680
+
Arg
CCT
[ENA]
¢þ
>WENV180173321
OAVZ01000658
[OAVZ] human gut metagenome; faeces
2578
2655
+
Arg
CCT
[ENA]
¢þ
>WENV180173875
OAWA01001171
[OAWA] human gut metagenome; faeces
10924
10847
-
Arg
CCT
[ENA]
¢þ
>WENV180176129
OAWC01028522
[OAWC] human gut metagenome; faeces
290
367
+
Arg
CCT
[ENA]
¢þ
>WENV180176291
OAWD01000029
[OAWD] human gut metagenome; faeces
128880
128803
-
Arg
CCT
[ENA]
¢þ
>WENV180177321
OAWE01000489
[OAWE] human gut metagenome; faeces
3698
3621
-
Arg
CCT
[ENA]
¢þ
>WENV180183922
OAWR01000010
[OAWR] human gut metagenome; faeces
4453
4530
+
Arg
CCT
[ENA]
¢þ
>WENV180185738
OAWU01000094
[OAWU] human gut metagenome; faeces
60081
60004
-
Arg
CCT
[ENA]
¢þ
>WENV180188774
OAWX01001496
[OAWX] human gut metagenome; faeces
8988
8911
-
Arg
CCT
[ENA]
¢þ
>WENV180195876
OAZZ01002170
[OAZZ] human gut metagenome; faeces
562
639
+
Arg
CCT
[ENA]
¢þ
>WENV180289700
OBIU01000067
[OBIU] human gut metagenome; human gut
19914
19991
+
Arg
CCT
[ENA]
¢þ
>WENV180334867
OBLF01073265
[OBLF] metagenome; feces
370
293
-
Arg
CCT
[ENA]
¢þ
>WENV180409528
OBUU01003080
[OBUU] human gut metagenome; faeces
569
646
+
Arg
CCT
[ENA]
¢þ
>WENV180412329
OBVA01000747
[OBVA] human gut metagenome; faeces
2456
2379
-
Arg
CCT
[ENA]
¢þ
>WENV180414444
OBVD01000018
[OBVD] human gut metagenome; faeces
12635
12558
-
Arg
CCT
[ENA]
¢þ
>WENV180418661
OBVK01001972
[OBVK] human gut metagenome; faeces
419
342
-
Arg
CCT
[ENA]
¢þ
>WENV180418941
OBVL01002246
[OBVL] human gut metagenome; faeces
771
694
-
Arg
CCT
[ENA]
¢þ
>WENV180419451
OBVM01013520
[OBVM] human gut metagenome; faeces
30
107
+
Arg
CCT
[ENA]
¢þ
>WENV180420834
OBVP01000104
[OBVP] human gut metagenome; faeces
19908
19985
+
Arg
CCT
[ENA]
¢þ
>WENV180427981
OBWB01001686
[OBWB] human gut metagenome; faeces
563
640
+
Arg
CCT
[ENA]
¢þ
>WENV180437298
OBWO01002229
[OBWO] human gut metagenome; faeces
613
536
-
Arg
CCT
[ENA]
¢þ
>WENV180438528
OBWS01000064
[OBWS] human gut metagenome; faeces
68454
68377
-
Arg
CCT
[ENA]
¢þ
>WENV180441077
OBWW01000014
[OBWW] human gut metagenome; faeces
60629
60552
-
Arg
CCT
[ENA]
¢þ
>WENV180445722
OBXA01016635
[OBXA] human gut metagenome; faeces
65
142
+
Arg
CCT
[ENA]
¢þ
>WENV180451537
OBXI01020284
[OBXI] human gut metagenome; faeces
368
291
-
Arg
CCT
[ENA]
¢þ
>WENV180452529
OBXK01000003
[OBXK] human gut metagenome; faeces
211257
211334
+
Arg
CCT
[ENA]
¢þ
>WENV180454934
OBXO01000154
[OBXO] human gut metagenome; faeces
4420
4497
+
Arg
CCT
[ENA]
¢þ
>WENV180459383
OBXX01000143
[OBXX] human gut metagenome; faeces
19341
19418
+
Arg
CCT
[ENA]
¢þ
>WENV180460913
OBXZ01002481
[OBXZ] human gut metagenome; faeces
1698
1775
+
Arg
CCT
[ENA]
¢þ
>WENV180464973
OBYE01000041
[OBYE] human gut metagenome; faeces
2416
2493
+
Arg
CCT
[ENA]
¢þ
>WENV180473674
OBYR01000954
[OBYR] human gut metagenome; faeces
12425
12348
-
Arg
CCT
[ENA]
¢þ
>WENV180475173
OBYU01000222
[OBYU] human gut metagenome; faeces
12379
12302
-
Arg
CCT
[ENA]
¢þ
>WENV180486345
OBZM01000004
[OBZM] human gut metagenome; faeces
77323
77246
-
Arg
CCT
[ENA]
¢þ
>WENV180489346
OBZS01000044
[OBZS] human gut metagenome; faeces
10588
10665
+
Arg
CCT
[ENA]
¢þ
>WENV180490534
OBZU01002500
[OBZU] human gut metagenome; faeces
465
388
-
Arg
CCT
[ENA]
¢þ
>WENV180492001
OBZW01000161
[OBZW] human gut metagenome; faeces
9786
9863
+
Arg
CCT
[ENA]
¢þ
>WENV180492649
OBZX01000042
[OBZX] human gut metagenome; faeces
61475
61398
-
Arg
CCT
[ENA]
¢þ
>WENV180492946
OBZY01000026
[OBZY] human gut metagenome; faeces
19914
19991
+
Arg
CCT
[ENA]
¢þ
>WENV180493587
OBZZ01000091
[OBZZ] human gut metagenome; faeces
77127
77050
-
Arg
CCT
[ENA]
¢þ
>WENV180495117
OCAA01006307
[OCAA] human gut metagenome; faeces
289
366
+
Arg
CCT
[ENA]
¢þ
>WENV180495666
OCAB01000225
[OCAB] human gut metagenome; faeces
17881
17804
-
Arg
CCT
[ENA]
¢þ
>WENV180497738
OCAF01000004
[OCAF] human gut metagenome; faeces
4377
4454
+
Arg
CCT
[ENA]
¢þ
>WENV180498506
OCAG01000304
[OCAG] human gut metagenome; faeces
19356
19433
+
Arg
CCT
[ENA]
¢þ
>WENV180499322
OCAH01001148
[OCAH] human gut metagenome; faeces
4375
4452
+
Arg
CCT
[ENA]
¢þ
>WENV180500669
OCAJ01000074
[OCAJ] human gut metagenome; faeces
2609
2686
+
Arg
CCT
[ENA]
¢þ
>WENV180501550
OCAK01001979
[OCAK] human gut metagenome; faeces
8989
8912
-
Arg
CCT
[ENA]
¢þ
>WENV180505107
OCAO01004553
[OCAO] human gut metagenome; faeces
297
374
+
Arg
CCT
[ENA]
¢þ
>WENV180513352
OCHA01027183
[OCHA] human gut metagenome; human gut
607
530
-
Arg
CCT
[ENA]
¢þ
>WENV180596783
OCPI01001287
[OCPI] human gut metagenome; faeces
1980
1903
-
Arg
CCT
[ENA]
¢þ
>WENV180601119
OCPQ01007099
[OCPQ] human gut metagenome; faeces
2441
2364
-
Arg
CCT
[ENA]
¢þ
>WENV180603042
OCPR01026686
[OCPR] human gut metagenome; human gut
477
400
-
Arg
CCT
[ENA]
¢þ
>WENV180604627
OCPS01011832
[OCPS] human gut metagenome; human gut
2055
2132
+
Arg
CCT
[ENA]
¢þ
>WENV180607047
OCPU01000177
[OCPU] human gut metagenome; human gut
50580
50503
-
Arg
CCT
[ENA]
¢þ
>WENV180764012
ODIA01013246
[ODIA] human metagenome; G_DNA_Tongue dorsum
876
949
+
Arg
CCT
[ENA]
¢þ
>WENV180897803
ODNI01084921
[ODNI] human metagenome; G_DNA_Tongue dorsum
113
40
-
Arg
CCT
[ENA]
¢þ
>WENV180929814
ODTN01015440
[ODTN] human metagenome; G_DNA_Tongue dorsum
1023
950
-
Arg
CCT
[ENA]
¢þ
>W08010130
ABQP01000005
Actinomycetota
Bifidobacterium bifidum NCIMB 41171 [ABQP]
91159
91082
-
Arg
CCT
[ENA]
¡û
>WENV181119057
OEFH01078517
[OEFH] human metagenome; G_DNA_Stool
209
132
-
Arg
CCT
[ENA]
¢þ
>WENV181187569
OENZ01000011
[OENZ] human gut metagenome; human gut
88761
88684
-
Arg
CCT
[ENA]
¢þ
>WENV181216776
OFCG01000149
[OFCG] metagenome; Human gut stool
17875
17798
-
Arg
CCT
[ENA]
¢þ
>WENV181217703
OFCL01000014
[OFCL] metagenome; Human gut stool
51736
51813
+
Arg
CCT
[ENA]
¢þ
>WENV181218393
OFCM01000321
[OFCM] metagenome; Human gut stool
6067
5990
-
Arg
CCT
[ENA]
¢þ
>WENV181218703
OFCN01000018
[OFCN] metagenome; Human gut stool
51736
51813
+
Arg
CCT
[ENA]
¢þ
>WENV181219480
OFCP01000019
[OFCP] metagenome; Human gut stool
79272
79195
-
Arg
CCT
[ENA]
¢þ
>WENV181221054
OFCU01000057
[OFCU] metagenome; Human gut stool
68984
68907
-
Arg
CCT
[ENA]
¢þ
>WENV181222045
OFDA01000025
[OFDA] metagenome; Human gut stool
51490
51567
+
Arg
CCT
[ENA]
¢þ
>WENV181330864
OFLZ01000122
[OFLZ] human gut metagenome; human gut
18357
18434
+
Arg
CCT
[ENA]
¢þ
>WENV181336952
OFME01000181
[OFME] human gut metagenome; human gut
5612
5689
+
Arg
CCT
[ENA]
¢þ
>WENV181345476
OFML01000151
[OFML] human gut metagenome; human gut
37693
37616
-
Arg
CCT
[ENA]
¢þ
>WENV181347281
OFMM01001942
[OFMM] human gut metagenome; human gut
4341
4264
-
Arg
CCT
[ENA]
¢þ
>WENV181348127
OFMN01000105
[OFMN] human gut metagenome; human gut
33736
33813
+
Arg
CCT
[ENA]
¢þ
>WENV181366588
OFPS01007003
[OFPS] human gut metagenome; human gut
559
482
-
Arg
CCT
[ENA]
¢þ
>WENV181394727
OFRZ01000545
[OFRZ] human gut metagenome; human gut
572
495
-
Arg
CCT
[ENA]
¢þ
>W141143986
AWSW01000054
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [AWSW]
68601
68524
-
Arg
CCT
[ENA]
¡û
>WENV181470897
OGEU01026883
[OGEU] metagenome; Human gut stool
397
474
+
Arg
CCT
[ENA]
¢þ
>WENV181523052
OGHF01032208
[OGHF] metagenome; Human gut stool
294
371
+
Arg
CCT
[ENA]
¢þ
>WENV181671775
OGON01005985
[OGON] human gut metagenome; faeces
3642
3565
-
Arg
CCT
[ENA]
¢þ
>WENV181673819
OGOO01011056
[OGOO] human gut metagenome; faeces
3283
3360
+
Arg
CCT
[ENA]
¢þ
>WENV181690020
OGOY01011947
[OGOY] human gut metagenome; faeces
823
746
-
Arg
CCT
[ENA]
¢þ
>WENV181701352
OGPH01000917
[OGPH] human gut metagenome; faeces
8584
8661
+
Arg
CCT
[ENA]
¢þ
>WENV181705822
OGPK01040252
[OGPK] human gut metagenome; faeces
623
546
-
Arg
CCT
[ENA]
¢þ
>WENV181714730
OGPR01004765
[OGPR] human gut metagenome; faeces
2445
2368
-
Arg
CCT
[ENA]
¢þ
>WENV181722300
OGPV01043229
[OGPV] human gut metagenome; faeces
995
918
-
Arg
CCT
[ENA]
¢þ
>WENV181722701
OGPW01000165
[OGPW] human gut metagenome; faeces
50321
50244
-
Arg
CCT
[ENA]
¢þ
>WENV181746675
OGQN01002811
[OGQN] human gut metagenome; faeces
9669
9592
-
Arg
CCT
[ENA]
¢þ
>WENV181755849
OGQS01030785
[OGQS] human gut metagenome; faeces
428
351
-
Arg
CCT
[ENA]
¢þ
>WENV181762222
OGQW01062919
[OGQW] human gut metagenome; faeces
52
129
+
Arg
CCT
[ENA]
¢þ
>WENV181764352
OGQX01075995
[OGQX] human gut metagenome; faeces
374
297
-
Arg
CCT
[ENA]
¢þ
>WENV181770783
OGRB01032908
[OGRB] human gut metagenome; faeces
249
326
+
Arg
CCT
[ENA]
¢þ
>WENV181781288
OGRJ01031243
[OGRJ] human gut metagenome; faeces
295
372
+
Arg
CCT
[ENA]
¢þ
>WENV181785873
OGRN01000197
[OGRN] human gut metagenome; faeces
53331
53254
-
Arg
CCT
[ENA]
¢þ
>WENV181789310
OGRO01013003
[OGRO] human gut metagenome; faeces
3607
3530
-
Arg
CCT
[ENA]
¢þ
>WENV181794006
OGRR01036640
[OGRR] human gut metagenome; faeces
283
360
+
Arg
CCT
[ENA]
¢þ
>WENV181797788
OGRU01013605
[OGRU] human gut metagenome; faeces
578
501
-
Arg
CCT
[ENA]
¢þ
>WENV181803726
OGSD01042851
[OGSD] human gut metagenome; faeces
65
142
+
Arg
CCT
[ENA]
¢þ
>WENV181829806
OGUN01068535
[OGUN] human gut metagenome; faeces
670
593
-
Arg
CCT
[ENA]
¢þ
>WENV181834059
OGUQ01031047
[OGUQ] metagenome; Human gut stool
296
373
+
Arg
CCT
[ENA]
¢þ
>WENV181898708
OGXT01010752
[OGXT] human gut metagenome; faeces
2433
2356
-
Arg
CCT
[ENA]
¢þ
>WENV181913720
OGYE01020867
[OGYE] human gut metagenome; faeces
1710
1633
-
Arg
CCT
[ENA]
¢þ
>WENV181937575
OGYW01000186
[OGYW] human gut metagenome; faeces
2567
2644
+
Arg
CCT
[ENA]
¢þ
>WENV182394584
OIEJ01000071
[OIEJ] human gut metagenome; human gut
69154
69077
-
Arg
CCT
[ENA]
¢þ
>WENV182400324
OIEQ01000054
[OIEQ] human gut metagenome; human gut
43666
43743
+
Arg
CCT
[ENA]
¢þ
>WENV182401546
OIER01002974
[OIER] human gut metagenome; human gut
4461
4538
+
Arg
CCT
[ENA]
¢þ
>WENV182403626
OIEU01000047
[OIEU] human gut metagenome; human gut
69531
69454
-
Arg
CCT
[ENA]
¢þ
>WENV182446696
OILA01025859
[OILA] human gut metagenome; human gut
256
179
-
Arg
CCT
[ENA]
¢þ
>WENV182624972
OJKO01041676
[OJKO] metagenome; faeces
151
228
+
Arg
CCT
[ENA]
¢þ
>WENV182768715
OJRV01037673
[OJRV] human gut metagenome; human gut
448
371
-
Arg
CCT
[ENA]
¢þ
>WENV182771466
OJRX01008303
[OJRX] human gut metagenome; human gut
314
237
-
Arg
CCT
[ENA]
¢þ
>WENV182779508
OJSD01004409
[OJSD] human gut metagenome; human gut
163
240
+
Arg
CCT
[ENA]
¢þ
>WENV182781152
OJSE01002023
[OJSE] human gut metagenome; human gut
5612
5689
+
Arg
CCT
[ENA]
¢þ
>WENV182791905
OJSN01036736
[OJSN] human gut metagenome; human gut
749
672
-
Arg
CCT
[ENA]
¢þ
>WENV182796494
OJSQ01025071
[OJSQ] human gut metagenome; human gut
589
512
-
Arg
CCT
[ENA]
¢þ
>WENV182802093
OJUG01004714
[OJUG] human gut metagenome; human gut
3317
3394
+
Arg
CCT
[ENA]
¢þ
>WENV182805073
OJVC01000003
[OJVC] human gut metagenome; human gut
84006
83929
-
Arg
CCT
[ENA]
¢þ
>WENV182805325
OJVE01000048
[OJVE] human gut metagenome; human gut
17772
17695
-
Arg
CCT
[ENA]
¢þ
>WENV182872464
OKRV01006627
[OKRV] human gut metagenome; faeces
2465
2388
-
Arg
CCT
[ENA]
¢þ
>WENV182875494
OKRX01001601
[OKRX] human gut metagenome; faeces
10713
10636
-
Arg
CCT
[ENA]
¢þ
>WENV182942033
OKVG01024104
[OKVG] human gut metagenome; human gut
440
363
-
Arg
CCT
[ENA]
¢þ
>WENV182944100
OKVI01004021
[OKVI] human gut metagenome; human gut
717
640
-
Arg
CCT
[ENA]
¢þ
>WENV182947329
OKVL01018853
[OKVL] human gut metagenome; human gut
264
187
-
Arg
CCT
[ENA]
¢þ
>WENV182947717
OKVN01000028
[OKVN] human gut metagenome; human gut
60365
60442
+
Arg
CCT
[ENA]
¢þ
>WENV182950756
OKVT01000016
[OKVT] human gut metagenome; human gut
79749
79672
-
Arg
CCT
[ENA]
¢þ
>WENV182954096
OKWA01000027
[OKWA] human gut metagenome; human gut
19660
19737
+
Arg
CCT
[ENA]
¢þ
>WENV183001391
OLCJ01004910
[OLCJ] human gut metagenome; human gut
386
309
-
Arg
CCT
[ENA]
¢þ
>WENV183006275
OLDD01015389
[OLDD] human gut metagenome; human gut
712
635
-
Arg
CCT
[ENA]
¢þ
>WENV183063418
OLIF01041148
[OLIF] metagenome; faeces
214
137
-
Arg
CCT
[ENA]
¢þ
>WENV183083361
OLJB01056418
[OLJB] human gut metagenome; human gut
173
250
+
Arg
CCT
[ENA]
¢þ
>WENV183089968
OLJW01032403
[OLJW] human gut metagenome; human gut
643
566
-
Arg
CCT
[ENA]
¢þ
>WENV183096396
OLNE01000005
[OLNE] human gut metagenome; faeces
213807
213884
+
Arg
CCT
[ENA]
¢þ
>WENV183100411
OLNG01000015
[OLNG] human gut metagenome; faeces
53408
53331
-
Arg
CCT
[ENA]
¢þ
>WENV183105648
OLNL01000258
[OLNL] human gut metagenome; faeces
42819
42896
+
Arg
CCT
[ENA]
¢þ
>WENV183115530
OLNQ01010868
[OLNQ] human gut metagenome; faeces
4230
4307
+
Arg
CCT
[ENA]
¢þ
>WENV183119146
OLNT01002719
[OLNT] human gut metagenome; faeces
2521
2444
-
Arg
CCT
[ENA]
¢þ
>WENV183125598
OLNY01000970
[OLNY] human gut metagenome; faeces
9811
9888
+
Arg
CCT
[ENA]
¢þ
>WENV183133438
OLOC01000045
[OLOC] human gut metagenome; faeces
61051
60974
-
Arg
CCT
[ENA]
¢þ
>WENV183167908
OLOZ01001758
[OLOZ] human gut metagenome; faeces
5656
5733
+
Arg
CCT
[ENA]
¢þ
>WENV183179140
OLPH01001626
[OLPH] human gut metagenome; faeces
5580
5657
+
Arg
CCT
[ENA]
¢þ
>WENV183182098
OLPK01000004
[OLPK] human gut metagenome; faeces
78721
78644
-
Arg
CCT
[ENA]
¢þ
>WENV183187911
OLPP01000009
[OLPP] human gut metagenome; faeces
189532
189609
+
Arg
CCT
[ENA]
¢þ
>WENV183189001
OLPQ01000192
[OLPQ] human gut metagenome; faeces
5592
5669
+
Arg
CCT
[ENA]
¢þ
>WENV183206935
OLQA01004192
[OLQA] human gut metagenome; faeces
3973
4050
+
Arg
CCT
[ENA]
¢þ
>WENV183210773
OLQC01005504
[OLQC] human gut metagenome; faeces
6304
6227
-
Arg
CCT
[ENA]
¢þ
>WENV183214963
OLQG01000007
[OLQG] human gut metagenome; faeces
10956
10879
-
Arg
CCT
[ENA]
¢þ
>WENV183217165
OLQI01000049
[OLQI] human gut metagenome; faeces
53212
53135
-
Arg
CCT
[ENA]
¢þ
>WENV183227428
OLQQ01000001
[OLQQ] human gut metagenome; faeces
140702
140779
+
Arg
CCT
[ENA]
¢þ
>WENV183231324
OLQU01000007
[OLQU] human gut metagenome; faeces
71880
71803
-
Arg
CCT
[ENA]
¢þ
>WENV183244736
OLRE01000314
[OLRE] human gut metagenome; faeces
43172
43249
+
Arg
CCT
[ENA]
¢þ
>WENV183259644
OLRO01009122
[OLRO] human gut metagenome; faeces
956
1033
+
Arg
CCT
[ENA]
¢þ
>WENV183264939
OLRS01001076
[OLRS] human gut metagenome; faeces
22891
22814
-
Arg
CCT
[ENA]
¢þ
>WENV183267100
OLRT01045186
[OLRT] human gut metagenome; faeces
279
356
+
Arg
CCT
[ENA]
¢þ
>WENV183270215
OLRV01004477
[OLRV] human gut metagenome; faeces
570
493
-
Arg
CCT
[ENA]
¢þ
>WENV183297057
OLSM01000745
[OLSM] human gut metagenome; faeces
18081
18004
-
Arg
CCT
[ENA]
¢þ
>WENV183306979
OLTD01000103
[OLTD] human gut metagenome; faeces
51622
51545
-
Arg
CCT
[ENA]
¢þ
>WENV183307393
OLTF01003527
[OLTF] human gut metagenome; faeces
4
81
+
Arg
CCT
[ENA]
¢þ
>WENV183313875
OLVR01000349
[OLVR] human gut metagenome; faeces
51622
51545
-
Arg
CCT
[ENA]
¢þ
>WENV183329854
OLWB01001460
[OLWB] human gut metagenome; faeces
16295
16218
-
Arg
CCT
[ENA]
¢þ
>WENV183404503
OLZW01027670
[OLZW] human gut metagenome; feces
75
1
-
Arg
CCT
[ENA]
¢þ
>WENV183501367
OMGS01000104
[OMGS] human gut metagenome; human gut
54697
54774
+
Arg
CCT
[ENA]
¢þ
>WENV183522582
ONZR01000280
[ONZR] human gut metagenome; human gut
6743
6820
+
Arg
CCT
[ENA]
¢þ
>WENV183523157
ONZS01000065
[ONZS] human gut metagenome; human gut
109264
109341
+
Arg
CCT
[ENA]
¢þ
>WENV183527468
ONZW01000599
[ONZW] human gut metagenome; human gut
9775
9852
+
Arg
CCT
[ENA]
¢þ
>WENV183528942
ONZX01019087
[ONZX] human gut metagenome; human gut
280
203
-
Arg
CCT
[ENA]
¢þ
>WENV183559855
OOBT01001525
[OOBT] human gut metagenome; human gut
8657
8734
+
Arg
CCT
[ENA]
¢þ
>WENV183560728
OOBU01000524
[OOBU] human gut metagenome; human gut
5682
5759
+
Arg
CCT
[ENA]
¢þ
>WENV183567032
OOCB01000134
[OOCB] human gut metagenome; human gut
66968
66891
-
Arg
CCT
[ENA]
¢þ
>WENV183580863
OOCN01000750
[OOCN] human gut metagenome; human gut
7840
7917
+
Arg
CCT
[ENA]
¢þ
>WENV183590301
OOCX01000181
[OOCX] human gut metagenome; human gut
49741
49664
-
Arg
CCT
[ENA]
¢þ
>WENV183601605
OODJ01002341
[OODJ] human gut metagenome; human gut
5295
5372
+
Arg
CCT
[ENA]
¢þ
>WENV183655555
OQWD01031513
[OQWD] human gut metagenome; human gut
99
176
+
Arg
CCT
[ENA]
¢þ
>WENV183750993
PPYE01001353
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
482
405
-
Arg
CCT
[ENA]
¢þ
>WENV183762719
PPYE01280665
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
979
1056
+
Arg
CCT
[ENA]
¢þ
>WENV183781663
PPYF01200791
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1495
1418
-
Arg
CCT
[ENA]
¢þ
>WENV183782426
PPYF01218955
[PPYF] human gut metagenome; stool from patient with Crohn's disease
9829
9906
+
Arg
CCT
[ENA]
¢þ
>WENV183787637
PPYF01340071
[PPYF] human gut metagenome; stool from patient with Crohn's disease
204
281
+
Arg
CCT
[ENA]
¢þ
>WENV183790344
PPYF01411228
[PPYF] human gut metagenome; stool from patient with Crohn's disease
129787
129710
-
Arg
CCT
[ENA]
¢þ
>WENV170540216
CWGX01000002
[CWGX] human gut metagenome; ENVO:feces
19318
19395
+
Arg
CCT
[ENA]
¢þ
>C181033244
CP018757
Actinomycetota
Bifidobacterium bifidum PRI 1 [CP018757]
755121
755198
+
Arg
CCT
-
¡û
>C181071750
CP022723
Actinomycetota
Bifidobacterium bifidum S6 [CP022723]
1957530
1957607
+
Arg
CCT
-
¡û
>C191000941
AP018131
Actinomycetota
Bifidobacterium bifidum LMG 13195 JCM 7004 [AP018131]
1534170
1534093
-
Arg
CCT
-
¡û
>C191000982
AP018132
Actinomycetota
Bifidobacterium bifidum TMC 3115 [AP018132]
1935699
1935622
-
Arg
CCT
-
¡û
>W141523795
JGYO01000002
Actinomycetota
Bifidobacterium bifidum [JGYO]
630553
630476
-
Arg
CCT
[ENA]
¡û
>C191207993
LR134344
Actinomycetota
Bifidobacterium bifidum NCTC13001 [LR134344]
2105511
2105588
+
Arg
CCT
-
¡û
>W1910828882
MWWQ01000004
Actinomycetota
Pseudoscardovia suis DSM 24744 [MWWQ]
978
905
-
Arg
CCT
[ENA]
¡û
>W1910828941
MWWR01000007
Actinomycetota
Pseudoscardovia radai DSM 24742 [MWWR]
110766
110692
-
Arg
CCT
[ENA]
¡û
>W1910873774
NDXI01000001
Actinomycetota
Bifidobacterium bifidum 1 G1971 [NDXI]
91448
91371
-
Arg
CCT
[ENA]
¡û
>W1810089976
PGFC01000002
Actinomycetota
Pseudoscardovia suis DSM 24744 [PGFC]
430731
430804
+
Arg
CCT
[ENA]
¡û
>W1810541435
QDIH01000028
Actinomycetota
Bifidobacterium bifidum DS33_23 [QDIH]
574
497
-
Arg
CCT
[ENA]
¡û
>W1810541508
QDII01000049
Actinomycetota
Bifidobacterium bifidum DS31_23 [QDII]
645
568
-
Arg
CCT
[ENA]
¡û
>W1810541510
QDIJ01000001
Actinomycetota
Bifidobacterium bifidum DS30_23 [QDIJ]
51740
51817
+
Arg
CCT
[ENA]
¡û
>W1810541690
QDIM01000059
Actinomycetota
Bifidobacterium bifidum DS26_23 [QDIM]
576
499
-
Arg
CCT
[ENA]
¡û
>W1810542212
QDIX01000011
Actinomycetota
Bifidobacterium bifidum DS32_23 [QDIX]
51220
51297
+
Arg
CCT
[ENA]
¡û
>W1810542358
QDJA01000007
Actinomycetota
Bifidobacterium bifidum DS25_23 [QDJA]
120900
120823
-
Arg
CCT
[ENA]
¡û
>W1810792909
QRJI01000007
Actinomycetota
Bifidobacterium bifidum AM18-29 [QRJI]
17363
17440
+
Arg
CCT
[ENA]
¡û
>W1810793095
QRJM01000002
Actinomycetota
Bifidobacterium bifidum AM18-12AC [QRJM]
372466
372389
-
Arg
CCT
[ENA]
¡û
>W1810793136
QRJN01000002
Actinomycetota
Bifidobacterium bifidum AM18-11 [QRJN]
17369
17446
+
Arg
CCT
[ENA]
¡û
>W1810793238
QRJP01000002
Actinomycetota
Bifidobacterium bifidum AM18-1 [QRJP]
17369
17446
+
Arg
CCT
[ENA]
¡û
>W1810795950
QRLK01000004
Actinomycetota
Bifidobacterium bifidum AM12-9 [QRLK]
200212
200289
+
Arg
CCT
[ENA]
¡û
>W1810796354
QRLR01000004
Actinomycetota
Bifidobacterium bifidum AM12-10 [QRLR]
200195
200272
+
Arg
CCT
[ENA]
¡û
>W1810798781
QRNM01000004
Actinomycetota
Bifidobacterium bifidum AF45-10 [QRNM]
502
425
-
Arg
CCT
[ENA]
¡û
>W1810814841
QSAO01000010
Actinomycetota
Bifidobacterium bifidum AF11-25B [QSAO]
98071
97994
-
Arg
CCT
[ENA]
¡û
>W1810822315
QSGB01000001
Actinomycetota
Bifidobacterium bifidum AM42-15AC [QSGB]
737039
737116
+
Arg
CCT
[ENA]
¡û
>W1810824909
QSHW01000001
Actinomycetota
Bifidobacterium bifidum AM36-1AC [QSHW]
374473
374396
-
Arg
CCT
[ENA]
¡û
>W1810832016
QSOS01000001
Actinomycetota
Bifidobacterium bifidum TM07-4AC [QSOS]
575159
575082
-
Arg
CCT
[ENA]
¡û
>W1810832415
QSPA01000001
Actinomycetota
Bifidobacterium bifidum TM06-5 [QSPA]
269687
269764
+
Arg
CCT
[ENA]
¡û
>W1810832816
QSPI01000001
Actinomycetota
Bifidobacterium bifidum TM06-10 [QSPI]
268890
268967
+
Arg
CCT
[ENA]
¡û
>W1810833273
QSPQ01000001
Actinomycetota
Bifidobacterium bifidum TM05-15 [QSPQ]
585879
585802
-
Arg
CCT
[ENA]
¡û
>W1810833850
QSQB01000001
Actinomycetota
Bifidobacterium bifidum TM04-12 [QSQB]
863831
863908
+
Arg
CCT
[ENA]
¡û
>W1810834020
QSQE01000002
Actinomycetota
Bifidobacterium bifidum TM02-17 [QSQE]
250429
250506
+
Arg
CCT
[ENA]
¡û
>W1810834076
QSQF01000003
Actinomycetota
Bifidobacterium bifidum TM02-15 [QSQF]
248312
248389
+
Arg
CCT
[ENA]
¡û
>W1810836177
QSRS01000001
Actinomycetota
Bifidobacterium bifidum TF07-22 [QSRS]
416157
416234
+
Arg
CCT
[ENA]
¡û
>W1810836891
QSSD01000002
Actinomycetota
Bifidobacterium bifidum TF06-14AC [QSSD]
17368
17445
+
Arg
CCT
[ENA]
¡û
>W1810836962
QSSE01000003
Actinomycetota
Bifidobacterium bifidum TF06-13 [QSSE]
382435
382358
-
Arg
CCT
[ENA]
¡û
>W1810837170
QSSI01000001
Actinomycetota
Bifidobacterium bifidum TF05-39 [QSSI]
585829
585752
-
Arg
CCT
[ENA]
¡û
>W1810837689
QSSS01000001
Actinomycetota
Bifidobacterium bifidum TF05-1 [QSSS]
407213
407290
+
Arg
CCT
[ENA]
¡û
>C151000252
AP012323
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [AP012323]
567985
567908
-
Arg
CCT
[Ensembl]
¡û
>C151000661
AP012334
Actinomycetota
Scardovia inopinata JCM 12537 [AP012334]
1244214
1244287
+
Arg
CCT
[Ensembl]
¡û
>C151068347
CP010412
Actinomycetota
Bifidobacterium bifidum BF3 [CP010412]
614788
614711
-
Arg
CCT
-
¡û
>W10112139
ADEB01000019
Actinomycetota
Parascardovia denticolens F0305 [ADEB]
78201
78128
-
Arg
CCT
[ENA]
¡û
>C11102324
CP001840
Actinomycetota
Bifidobacterium bifidum PRL2010 [CP001840]
565630
565553
-
Arg
CCT
[Ensembl]
¡û
>C11102372
CP002220
Actinomycetota
Bifidobacterium bifidum S17 [CP002220]
577316
577239
-
Arg
CCT
[Ensembl]
¡û
>W11115116
ADEB01000019
Actinomycetota
Parascardovia denticolens F0305 [ADEB]
78201
78128
-
Arg
CCT
[ENA]
¡û
>W1511364988
JSDS01000006
Actinomycetota
Bifidobacterium bifidum 156B [JSDS]
471158
471081
-
Arg
CCT
[ENA]
¡û
>W1511365047
JSDT01000002
Actinomycetota
Bifidobacterium bifidum 324B [JSDT]
622918
622841
-
Arg
CCT
[ENA]
¡û
>W1511365086
JSDU01000004
Actinomycetota
Bifidobacterium bifidum 85B [JSDU]
392104
392027
-
Arg
CCT
[ENA]
¡û
>W1511365135
JSDV01000004
Actinomycetota
Bifidobacterium bifidum A8 [JSDV]
478727
478650
-
Arg
CCT
[ENA]
¡û
>W1511365168
JSDW01000003
Actinomycetota
Bifidobacterium bifidum IPLA 20015 [JSDW]
125117
125040
-
Arg
CCT
[ENA]
¡û
>W1511365234
JSDX01000011
Actinomycetota
Bifidobacterium bifidum IPLA 20017 [JSDX]
108849
108772
-
Arg
CCT
[ENA]
¡û
>W1511365282
JSDY01000004
Actinomycetota
Bifidobacterium bifidum LMG 11582 [JSDY]
549442
549365
-
Arg
CCT
[ENA]
¡û
>W1511365340
JSDZ01000011
Actinomycetota
Bifidobacterium bifidum LMG 11583 [JSDZ]
94439
94362
-
Arg
CCT
[ENA]
¡û
>W1511365381
JSEA01000016
Actinomycetota
Bifidobacterium bifidum LMG 13195 [JSEA]
110827
110750
-
Arg
CCT
[ENA]
¡û
>W1511365428
JSEB01000005
Actinomycetota
Bifidobacterium bifidum LMG 13200 [JSEB]
436303
436226
-
Arg
CCT
[ENA]
¡û
>W1511473367
JWAI01000027
Actinomycetota
Alloscardovia omnicolens 1173_BLON [JWAI]
95004
95079
+
Arg
CCT
[ENA]
¡û
>C121001453
CP001361
Actinomycetota
Bifidobacterium bifidum BGN4 [CP001361]
529100
529023
-
Arg
CCT
[Ensembl]
¡û
>W121077191
AKCA01000001
Actinomycetota
Bifidobacterium bifidum NCIMB 41171 [AKCA]
330363
330286
-
Arg
CCT
[ENA]
¡û
>W1610045700
BBBT01000059
Actinomycetota
Bifidobacterium bifidum JCM 1254 [BBBT]
10848
10925
+
Arg
CCT
[ENA]
¡û
>W1610074714
BCXK01000022
Actinomycetota
Bifidobacterium bifidum [BCXK]
124255
124332
+
Arg
CCT
[ENA]
¡û
>W1610098207
CYXQ01000006
Actinomycetota
Bifidobacterium bifidum [CYXQ]
100270
100347
+
Arg
CCT
[ENA]
¡û
>W1610519251
JDUA01000016
Actinomycetota
Bifidobacterium minimum DSM 20102 [JDUA]
27437
27510
+
Arg
CCT
[ENA]
¡û
>W1610519783
JDUM01000009
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [JDUM]
17320
17397
+
Arg
CCT
[ENA]
¡û
>W1610686242
LKUR01000017
Actinomycetota
Bifidobacterium bifidum [LKUR]
45517
45594
+
Arg
CCT
[ENA]
¡û
>W1610889304
LRPK01000025
Actinomycetota
Alloscardovia omnicolens [LRPK]
133257
133182
-
Arg
CCT
[ENA]
¡û
>W1610889437
LRPO01000013
Actinomycetota
Bifidobacterium bifidum [LRPO]
21749
21826
+
Arg
CCT
[ENA]
¡û
>W1610921323
LSUI01000001
Actinomycetota
Bifidobacterium bifidum [LSUI]
124186
124263
+
Arg
CCT
[ENA]
¡û
>W1610921428
LSUL01000002
Actinomycetota
Bifidobacterium bifidum [LSUL]
130137
130060
-
Arg
CCT
[ENA]
¡û
>W1710042541
BBBT01000059
Actinomycetota
Bifidobacterium bifidum JCM 1254 [BBBT]
10848
10925
+
Arg
CCT
[ENA]
¡û
>W1710072529
BCXK01000022
Actinomycetota
Bifidobacterium bifidum [BCXK]
124255
124332
+
Arg
CCT
[ENA]
¡û
>W1710100962
CYXQ01000006
Actinomycetota
Bifidobacterium bifidum [CYXQ]
100270
100347
+
Arg
CCT
[ENA]
¡û
>W1710558390
FOLU01000008
Actinomycetota
Bifidobacterium bifidum [FOLU]
97503
97426
-
Arg
CCT
[ENA]
¡û
>W1710614706
JDUA01000016
Actinomycetota
Bifidobacterium minimum DSM 20102 [JDUA]
27437
27510
+
Arg
CCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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