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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.23831 (9 seq.)
>W1910373597
FUHM01000001
Bacillota
Anaerosalibacter sp. Marseille-P3206 [FUHM]
1149
1239
+
Ser
TGA
[ENA]
¡û
>W2010401470
FUHM01000001
Bacillota
Anaerosalibacter sp. Marseille-P3206 [FUHM]
1149
1239
+
Ser
TGA
[ENA]
¡û
>W2011627090
SMAE01000002
Bacillota
Keratinibaculum paraultunense DSM 26752 [SMAE]
1747
1837
+
Ser
TGA
[ENA]
¡û
>W2012153523
VULR01000026
Bacillota
Anaerosalibacter bizertensis Med78-601-WT-4W-RMD-3 [VULR]
1410
1500
+
Ser
TGA
[ENA]
¡û
>W2110619557
JAHLOA010000023
Bacillota
Anaerosalibacter bizertensis N103 [JAHLOA]
29397
29307
-
Ser
TGA
[ENA]
¡û
>W2110621772
JAHLPS010000073
Bacillota
Caproiciproducens sp. MSJ-32 [JAHLPS]
694
784
+
Ser
TGA
[ENA]
¡û
>W2110720427
JAJBNW010000005
Bacillota
Anaerosalibacter bizertensis MSK.14.19 [JAJBNW]
56913
56823
-
Ser
TGA
[ENA]
¡û
>W1710528471
FNNG01000002
Bacillota
Tepidimicrobium xylanilyticum [FNNG]
405613
405523
-
Ser
TGA
[ENA]
¡û
>W1710587061
FQXR01000021
Bacillota
Sporanaerobacter acetigenes DSM 13106 [FQXR]
668
758
+
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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