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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.239037 (5 seq.)
>WENV180019738
FTCM01000031
[FTCM] metagenome; soil
521
597
+
Val
TAC
[ENA]
¡û
>WENV180028114
FTIZ01751848
[FTIZ] metagenome; soil
49210
49134
-
Val
TAC
[ENA]
¡û
>WENV183697003
OUNJ010000369
[OUNJ] metagenome; soil
41423
41499
+
Val
TAC
[ENA]
¡û
>WENV183697099
OUNJ010002518
[OUNJ] metagenome; soil
117
41
-
Val
TAC
[ENA]
¡û
>WENV183697340
OUNJ010444860
[OUNJ] metagenome; soil
8344
8268
-
Val
TAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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