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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.240017 (5 seq.)
>WENV181154089
OEIC01000445
[OEIC] human metagenome; G_DNA_Stool
27003
26929
-
Lys
TTT
[ENA]
¡û
>WENV181186874
OEMZ01079207
[OEMZ] gut metagenome; human stools
90
16
-
Lys
TTT
[ENA]
¡û
>WENV170056901
CDZG01018929
[CDZG] gut metagenome; human stools
24051
23975
-
Lys
TTT
[ENA]
¡û
>WENV170058716
CDZH01020787
[CDZH] gut metagenome; human stools
8190
8266
+
Lys
TTT
[ENA]
¡û
>WENV170060656
CDZI01012891
[CDZI] gut metagenome; human stools
24116
24040
-
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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