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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.243346 (280 seq.)
>W1710797330
LJSZ01000009
Bacillota
Clostridium sporogenes [LJSZ]
29337
29262
-
Ala
TGC
[ENA]
¡û
>W1710797391
LJSZ01000048
Bacillota
Clostridium sporogenes [LJSZ]
1170
1095
-
Ala
TGC
[ENA]
¡û
>W1710797401
LJSZ01000069
Bacillota
Clostridium sporogenes [LJSZ]
346
421
+
Ala
TGC
[ENA]
¡û
>W1711090808
LTAY01000024
Bacillota
Clostridium thermobutyricum DSM 4928 [LTAY]
394
469
+
Ala
TGC
[ENA]
¡û
>W1711309901
MARF01000037
Bacillota
Clostridium perfringens [MARF]
23
98
+
Ala
TGC
[ENA]
¡û
>W1711309919
MARF01000060
Bacillota
Clostridium perfringens [MARF]
24
99
+
Ala
TGC
[ENA]
¡û
>W1711310210
MARJ01000062
Bacillota
Clostridium perfringens [MARJ]
18433
18358
-
Ala
TGC
[ENA]
¡û
>W1711310223
MARJ01000093
Bacillota
Clostridium perfringens [MARJ]
820
895
+
Ala
TGC
[ENA]
¡û
>W1711310445
MARM01000064
Bacillota
Clostridium perfringens [MARM]
23
98
+
Ala
TGC
[ENA]
¡û
>W1711310463
MARM01000076
Bacillota
Clostridium perfringens [MARM]
59146
59071
-
Ala
TGC
[ENA]
¡û
>W1711311009
MART01000054
Bacillota
Clostridium perfringens [MART]
1340
1415
+
Ala
TGC
[ENA]
¡û
>W1711311055
MARU01000034
Bacillota
Clostridium perfringens [MARU]
22
97
+
Ala
TGC
[ENA]
¡û
>W1711311064
MARU01000048
Bacillota
Clostridium perfringens [MARU]
1563
1638
+
Ala
TGC
[ENA]
¡û
>W1711311215
MARW01000046
Bacillota
Clostridium perfringens [MARW]
21
96
+
Ala
TGC
[ENA]
¡û
>W1711311239
MARW01000056
Bacillota
Clostridium perfringens [MARW]
56560
56485
-
Ala
TGC
[ENA]
¡û
>W1711311286
MARX01000022
Bacillota
Clostridium perfringens [MARX]
22
97
+
Ala
TGC
[ENA]
¡û
>W1711311302
MARX01000034
Bacillota
Clostridium perfringens [MARX]
956
1031
+
Ala
TGC
[ENA]
¡û
>W1711311515
MASA01000027
Bacillota
Clostridium perfringens [MASA]
18536
18461
-
Ala
TGC
[ENA]
¡û
>W1711311523
MASA01000039
Bacillota
Clostridium perfringens [MASA]
23
98
+
Ala
TGC
[ENA]
¡û
>W1711311670
MASC01000035
Bacillota
Clostridium perfringens [MASC]
18533
18458
-
Ala
TGC
[ENA]
¡û
>W1711311677
MASC01000043
Bacillota
Clostridium perfringens [MASC]
1099
1174
+
Ala
TGC
[ENA]
¡û
>W131002334
AGYT01000006
Bacillota
Clostridium thermobutyricum 209318 [AGYT]
261
336
+
Ala
TGC
[ENA]
¡û
>W131002354
AGYT01000011
Bacillota
Clostridium thermobutyricum 209318 [AGYT]
596
521
-
Ala
TGC
[ENA]
¡û
>W131002367
AGYT01000014
Bacillota
Clostridium thermobutyricum 209318 [AGYT]
205739
205664
-
Ala
TGC
[ENA]
¡û
>W1712040367
NFKH01000035
Bacillota
Clostridium perfringens [NFKH]
18499
18424
-
Ala
TGC
[ENA]
¡û
>W1712040377
NFKH01000051
Bacillota
Clostridium perfringens [NFKH]
33
108
+
Ala
TGC
[ENA]
¡û
>W1712040379
NFKH01000059
Bacillota
Clostridium perfringens [NFKH]
552
477
-
Ala
TGC
[ENA]
¡û
>C171020879
CP013101
Bacillota
Clostridium perfringens FORC_025 [CP013101]
14662
14737
+
Ala
TGC
-
¡û
>C171020889
CP013101
Bacillota
Clostridium perfringens FORC_025 [CP013101]
87250
87325
+
Ala
TGC
-
¡û
>C171020915
CP013101
Bacillota
Clostridium perfringens FORC_025 [CP013101]
3120048
3119973
-
Ala
TGC
-
¡û
>C171020951
CP013101
Bacillota
Clostridium perfringens FORC_025 [CP013101]
2872937
2872862
-
Ala
TGC
-
¡û
>C171040804
CP015756
Bacillota
Clostridium estertheticum subsp. estertheticum DSM 8809 [CP015756]
109991
110066
+
Ala
TGC
-
¡û
>C171040838
CP015756
Bacillota
Clostridium estertheticum subsp. estertheticum DSM 8809 [CP015756]
4603245
4603170
-
Ala
TGC
-
¡û
>WENV180122592
OASU01003568
[OASU] human gut metagenome; faeces
1048
973
-
Ala
TGC
[ENA]
¢þ
>WENV180153213
OAUR01007957
[OAUR] human gut metagenome; faeces
567
642
+
Ala
TGC
[ENA]
¢þ
>WENV180161703
OAVE01003916
[OAVE] human gut metagenome; faeces
611
686
+
Ala
TGC
[ENA]
¢þ
>WENV180168622
OAVR01004597
[OAVR] human gut metagenome; faeces
406
481
+
Ala
TGC
[ENA]
¢þ
>WENV180168665
OAVR01011308
[OAVR] human gut metagenome; faeces
76
1
-
Ala
TGC
[ENA]
¢þ
>WENV180175956
OAWC01004715
[OAWC] human gut metagenome; faeces
2018
1944
-
Ala
TGC
[ENA]
¢þ
>WENV180402570
OBRP01013286
[OBRP] human gut metagenome; ENVO:feces
197
122
-
Ala
TGC
[ENA]
¢þ
>WENV180407655
OBUR01000069
[OBUR] human gut metagenome; faeces
348
423
+
Ala
TGC
[ENA]
¢þ
>WENV180407796
OBUR01001202
[OBUR] human gut metagenome; faeces
935
1010
+
Ala
TGC
[ENA]
¢þ
>WENV180559502
OCKC01000362
[OCKC] human gut metagenome; Infant 2 DOL 26 gut
642
717
+
Ala
TGC
[ENA]
¢þ
>WENV180598955
OCPN01006022
[OCPN] human gut metagenome; faeces
77
2
-
Ala
TGC
[ENA]
¢þ
>WENV180606780
OCPT01150229
[OCPT] human gut metagenome; human gut
76
1
-
Ala
TGC
[ENA]
¢þ
>WENV180631911
OCQY01103358
[OCQY] human gut metagenome; human gut
380
306
-
Ala
TGC
[ENA]
¢þ
>WENV180711970
ODFR01005872
[ODFR] human metagenome; G_DNA_R_Retroauricular crease
393
318
-
Ala
TGC
[ENA]
¢þ
>WENV180744508
ODHJ01065648
[ODHJ] human metagenome; G_DNA_Stool
124
198
+
Ala
TGC
[ENA]
¢þ
>W08001377
ABDU01000002
Bacillota
Clostridium perfringens C str. JGS1495 [ABDU]
85
13
-
Ala
TGC
[ENA]
¡û
>W08001406
ABDU01000038
Bacillota
Clostridium perfringens C str. JGS1495 [ABDU]
4267
4342
+
Ala
TGC
[ENA]
¡û
>W08001438
ABDU01000051
Bacillota
Clostridium perfringens C str. JGS1495 [ABDU]
40613
40541
-
Ala
TGC
[ENA]
¡û
>W08001443
ABDU01000052
Bacillota
Clostridium perfringens C str. JGS1495 [ABDU]
1752
1827
+
Ala
TGC
[ENA]
¡û
>W08001460
ABDU01000080
Bacillota
Clostridium perfringens C str. JGS1495 [ABDU]
23951
23879
-
Ala
TGC
[ENA]
¡û
>W08001488
ABDV01000010
Bacillota
Clostridium perfringens B str. ATCC 3626 [ABDV]
92611
92539
-
Ala
TGC
[ENA]
¡û
>W08001510
ABDV01000015
Bacillota
Clostridium perfringens B str. ATCC 3626 [ABDV]
4976
5051
+
Ala
TGC
[ENA]
¡û
>W08001526
ABDV01000025
Bacillota
Clostridium perfringens B str. ATCC 3626 [ABDV]
25653
25728
+
Ala
TGC
[ENA]
¡û
>W08001538
ABDV01000036
Bacillota
Clostridium perfringens B str. ATCC 3626 [ABDV]
23216
23144
-
Ala
TGC
[ENA]
¡û
>W08001658
ABDX01000009
Bacillota
Clostridium perfringens CPE str. F4969 [ABDX]
24124
24199
+
Ala
TGC
[ENA]
¡û
>W08001672
ABDX01000013
Bacillota
Clostridium perfringens CPE str. F4969 [ABDX]
74984
74912
-
Ala
TGC
[ENA]
¡û
>W08001687
ABDX01000026
Bacillota
Clostridium perfringens CPE str. F4969 [ABDX]
38965
38893
-
Ala
TGC
[ENA]
¡û
>W08001704
ABDX01000038
Bacillota
Clostridium perfringens CPE str. F4969 [ABDX]
4274
4349
+
Ala
TGC
[ENA]
¡û
>W08009050
ABOO01000016
Bacillota
Clostridium perfringens D str. JGS1721 [ABOO]
4814
4889
+
Ala
TGC
[ENA]
¡û
>W08009071
ABOO01000026
Bacillota
Clostridium perfringens D str. JGS1721 [ABOO]
31802
31730
-
Ala
TGC
[ENA]
¡û
>W08009076
ABOO01000032
Bacillota
Clostridium perfringens D str. JGS1721 [ABOO]
1032
1107
+
Ala
TGC
[ENA]
¡û
>W08009090
ABOO01000044
Bacillota
Clostridium perfringens D str. JGS1721 [ABOO]
4806
4881
+
Ala
TGC
[ENA]
¡û
>W08009106
ABOO01000082
Bacillota
Clostridium perfringens D str. JGS1721 [ABOO]
514
442
-
Ala
TGC
[ENA]
¡û
>W08009108
ABOO01000129
Bacillota
Clostridium perfringens D str. JGS1721 [ABOO]
1032
1107
+
Ala
TGC
[ENA]
¡û
>WENV180838957
ODKH01002684
[ODKH] human metagenome; G_DNA_Anterior nares
106
31
-
Ala
TGC
[ENA]
¢þ
>WENV180855637
ODKY01000449
[ODKY] human metagenome; G_DNA_R_Retroauricular crease
152
227
+
Ala
TGC
[ENA]
¢þ
>WENV180894302
ODMR01055591
[ODMR] human metagenome; G_DNA_Stool
248
322
+
Ala
TGC
[ENA]
¢þ
>WENV180894352
ODMR01063534
[ODMR] human metagenome; G_DNA_Stool
351
425
+
Ala
TGC
[ENA]
¢þ
>WENV180957299
ODUK01027185
[ODUK] human metagenome; G_DNA_Stool
325
399
+
Ala
TGC
[ENA]
¢þ
>WENV180966839
ODUS01000003
[ODUS] human metagenome; G_DNA_L_Retroauricular crease
137
212
+
Ala
TGC
[ENA]
¢þ
>WENV180966964
ODUS01000710
[ODUS] human metagenome; G_DNA_L_Retroauricular crease
2353
2278
-
Ala
TGC
[ENA]
¢þ
>WENV181118628
OEFH01022317
[OEFH] human metagenome; G_DNA_Stool
326
400
+
Ala
TGC
[ENA]
¢þ
>W141111823
AVSV01000005
Bacillota
Clostridium sp. Ade.TY [AVSV]
1237
1162
-
Ala
TGC
[ENA]
¡û
>W141111855
AVSV01000018
Bacillota
Clostridium sp. Ade.TY [AVSV]
57028
56953
-
Ala
TGC
[ENA]
¡û
>W141111874
AVSV01000042
Bacillota
Clostridium sp. Ade.TY [AVSV]
122
47
-
Ala
TGC
[ENA]
¡û
>W141111882
AVSV01000050
Bacillota
Clostridium sp. Ade.TY [AVSV]
283
208
-
Ala
TGC
[ENA]
¡û
>WENV181201372
OERN01004632
[OERN] metagenome; water of meat washing
307
382
+
Ala
TGC
[ENA]
¢þ
>WENV181247557
OFFK01052090
[OFFK] mouse gut metagenome; faeces
923
849
-
Ala
TGC
[ENA]
¢þ
>WENV181271609
OFGF01084231
[OFGF] mouse gut metagenome; faeces
20
94
+
Ala
TGC
[ENA]
¢þ
>WENV181283917
OFGQ01047013
[OFGQ] mouse gut metagenome; faeces
906
832
-
Ala
TGC
[ENA]
¢þ
>WENV181327468
OFLQ01000089
[OFLQ] metagenome; faeces
58972
58897
-
Ala
TGC
[ENA]
¢þ
>WENV181327542
OFLQ01000225
[OFLQ] metagenome; faeces
2
77
+
Ala
TGC
[ENA]
¢þ
>W141143034
AWRZ01000053
Bacillota
Clostridium perfringens JJC [AWRZ]
208
133
-
Ala
TGC
[ENA]
¡û
>W141143037
AWRZ01000054
Bacillota
Clostridium perfringens JJC [AWRZ]
76
1
-
Ala
TGC
[ENA]
¡û
>WENV181463781
OGEO01038937
[OGEO] metagenome; Human gut stool
143
218
+
Ala
TGC
[ENA]
¢þ
>WENV181514738
OGGV01047576
[OGGV] metagenome; Human gut stool
547
472
-
Ala
TGC
[ENA]
¢þ
>WENV181591314
OGKO01028803
[OGKO] metagenome; Human gut stool
143
218
+
Ala
TGC
[ENA]
¢þ
>WENV181630117
OGMP01035576
[OGMP] metagenome; Human gut stool
218
292
+
Ala
TGC
[ENA]
¢þ
>WENV181747565
OGQN01051860
[OGQN] human gut metagenome; faeces
801
727
-
Ala
TGC
[ENA]
¢þ
>WENV181798491
OGRV01001001
[OGRV] human gut metagenome; fecal sample 3 from infant 4
1309
1384
+
Ala
TGC
[ENA]
¢þ
>WENV181803534
OGSD01021021
[OGSD] human gut metagenome; faeces
272
346
+
Ala
TGC
[ENA]
¢þ
>WENV181811487
OGSY01004623
[OGSY] human gut metagenome; fecal sample 5 from infant 8
747
672
-
Ala
TGC
[ENA]
¢þ
>WENV182006679
OHBF01031388
[OHBF] human gut metagenome; feces
86
160
+
Ala
TGC
[ENA]
¢þ
>WENV182098122
OHHP01027857
[OHHP] human gut metagenome; feces
224
298
+
Ala
TGC
[ENA]
¢þ
>WENV182125696
OHJS01036373
[OHJS] human gut metagenome; feces
490
416
-
Ala
TGC
[ENA]
¢þ
>WENV182126598
OHJT01052342
[OHJT] human gut metagenome; feces
123
197
+
Ala
TGC
[ENA]
¢þ
>WENV182241496
OHSF01040081
[OHSF] human gut metagenome; feces
151
225
+
Ala
TGC
[ENA]
¢þ
>WENV182262201
OHTM01044904
[OHTM] human gut metagenome; feces
224
298
+
Ala
TGC
[ENA]
¢þ
>WENV182329724
OHZE01022061
[OHZE] human gut metagenome; feces
227
301
+
Ala
TGC
[ENA]
¢þ
>W141231563
BAUF01000004
Bacillota
Clostridium botulinum B str. Osaka05 [BAUF]
270
345
+
Ala
TGC
[ENA]
¡û
>WENV182359490
OIBX01017402
[OIBX] human gut metagenome; feces
801
727
-
Ala
TGC
[ENA]
¢þ
>WENV182368238
OICM01028249
[OICM] human gut metagenome; feces
167
241
+
Ala
TGC
[ENA]
¢þ
>W141243859
CAJU020000013
Bacillota
Anaerococcus provencensis 9402080 [CAJU]
125
200
+
Ala
TGC
[ENA]
¡û
>WENV182468234
OIOX01018338
[OIOX] human gut metagenome; human gut
719
644
-
Ala
TGC
[ENA]
¢þ
>WENV182645862
OJLZ01006425
[OJLZ] metagenome; surface
2248
2173
-
Ala
TGC
[ENA]
¢þ
>WENV182646300
OJMA01001211
[OJMA] metagenome; surface
1978
1903
-
Ala
TGC
[ENA]
¢þ
>WENV182658394
OJMK01067649
[OJMK] human gut metagenome; feces
422
496
+
Ala
TGC
[ENA]
¢þ
>WENV182680060
OJNT01033383
[OJNT] human gut metagenome; human gut
224
298
+
Ala
TGC
[ENA]
¢þ
>W141267371
CCNN01000013
Bacillota
Clostridium amazonitimonense LF2 [CCNN]
112746
112671
-
Ala
TGC
[ENA]
¡û
>W141267373
CCNN01000013
Bacillota
Clostridium amazonitimonense LF2 [CCNN]
111163
111088
-
Ala
TGC
[ENA]
¡û
>W141267420
CCNN01000015
Bacillota
Clostridium amazonitimonense LF2 [CCNN]
163746
163821
+
Ala
TGC
[ENA]
¡û
>WENV182799288
OJTS01001355
[OJTS] human gut metagenome; human gut
578
653
+
Ala
TGC
[ENA]
¢þ
>WENV182811432
OJXK01009279
[OJXK] human gut metagenome; human gut
242
167
-
Ala
TGC
[ENA]
¢þ
>WENV182815101
OJYO01001844
[OJYO] human gut metagenome; human gut
2293
2218
-
Ala
TGC
[ENA]
¢þ
>WENV182825565
OKCK01000608
[OKCK] human gut metagenome; human gut
3877
3952
+
Ala
TGC
[ENA]
¢þ
>WENV182835062
OKFJ01004533
[OKFJ] human gut metagenome; human gut
242
167
-
Ala
TGC
[ENA]
¢þ
>WENV182842671
OKIF01000433
[OKIF] human gut metagenome; human gut
2900
2975
+
Ala
TGC
[ENA]
¢þ
>WENV182846766
OKJR01002156
[OKJR] human gut metagenome; human gut
294
219
-
Ala
TGC
[ENA]
¢þ
>WENV182848385
OKKG01008325
[OKKG] human gut metagenome; human gut
242
167
-
Ala
TGC
[ENA]
¢þ
>WENV182856281
OKNJ01000368
[OKNJ] human gut metagenome; human gut
4014
3939
-
Ala
TGC
[ENA]
¢þ
>WENV182859230
OKOL01001668
[OKOL] human gut metagenome; human gut
2764
2689
-
Ala
TGC
[ENA]
¢þ
>WENV182885855
OKSC01032909
[OKSC] human gut metagenome; faeces
1183
1109
-
Ala
TGC
[ENA]
¢þ
>WENV182900339
OKST01035369
[OKST] human gut metagenome; feces
494
420
-
Ala
TGC
[ENA]
¢þ
>WENV182963500
OKWQ01000636
[OKWQ] human gut metagenome; stool
2
77
+
Ala
TGC
[ENA]
¢þ
>WENV182963561
OKWQ01001843
[OKWQ] human gut metagenome; stool
3194
3119
-
Ala
TGC
[ENA]
¢þ
>WENV182990236
OLAL01029794
[OLAL] human gut metagenome; human gut
416
341
-
Ala
TGC
[ENA]
¢þ
>WENV182997533
OLBP01025990
[OLBP] human gut metagenome; human gut
142
217
+
Ala
TGC
[ENA]
¢þ
>WENV183087429
OLJH01002541
[OLJH] human gut metagenome; human gut
622
697
+
Ala
TGC
[ENA]
¢þ
>WENV183090736
OLKE01000473
[OLKE] metagenome; surface
2526
2451
-
Ala
TGC
[ENA]
¢þ
>WENV183140122
OLOI01007589
[OLOI] human gut metagenome; faeces
3886
3811
-
Ala
TGC
[ENA]
¢þ
>WENV183284233
OLSD01008536
[OLSD] human gut metagenome; faeces
1278
1353
+
Ala
TGC
[ENA]
¢þ
>WENV183294650
OLSK01046861
[OLSK] human gut metagenome; faeces
494
420
-
Ala
TGC
[ENA]
¢þ
>WENV183315321
OLVR01070215
[OLVR] human gut metagenome; faeces
111
185
+
Ala
TGC
[ENA]
¢þ
>WENV183324638
OLVY01032133
[OLVY] human gut metagenome; feces
918
844
-
Ala
TGC
[ENA]
¢þ
>WENV183411208
OMAK01013063
[OMAK] human gut metagenome; feces
948
874
-
Ala
TGC
[ENA]
¢þ
>WENV183477943
OMFC01043719
[OMFC] human gut metagenome; feces
490
416
-
Ala
TGC
[ENA]
¢þ
>WENV183659967
OQWM01087883
[OQWM] human gut metagenome; human gut
219
294
+
Ala
TGC
[ENA]
¢þ
>WENV170005591
AMCI01008162
[AMCI] gut metagenome; fecal sample from gut
151
226
+
Ala
TGC
[ENA]
¢þ
>WENV170563070
CZCB01009623
[CZCB] anaerobic digester metagenome; anaerobic digester
829
754
-
Ala
TGC
[ENA]
¢þ
>WENV170683893
LFRM01009575
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
374
449
+
Ala
TGC
[ENA]
¢þ
>W141451999
JFBQ01000012
Bacillota
Clostridium sporogenes [JFBQ]
28764
28689
-
Ala
TGC
[ENA]
¡û
>W141460550
JFGA01000756
Bacillota
Clostridium botulinum [JFGA]
2446
2371
-
Ala
TGC
[ENA]
¡û
>W141460578
JFGA01001031
Bacillota
Clostridium botulinum [JFGA]
344
269
-
Ala
TGC
[ENA]
¡û
>W141460581
JFGA01001035
Bacillota
Clostridium botulinum [JFGA]
925
850
-
Ala
TGC
[ENA]
¡û
>W141460700
JFGC01001065
Bacillota
Clostridium botulinum [JFGC]
461
536
+
Ala
TGC
[ENA]
¡û
>W141460701
JFGC01001073
Bacillota
Clostridium botulinum [JFGC]
818
743
-
Ala
TGC
[ENA]
¡û
>W141460713
JFGC01001091
Bacillota
Clostridium botulinum [JFGC]
546
621
+
Ala
TGC
[ENA]
¡û
>C181012877
CP013242
Bacillota
Clostridium sporogenes CDC_67071 [CP013242]
3567683
3567758
+
Ala
TGC
-
¡û
>C181012913
CP013242
Bacillota
Clostridium sporogenes CDC_67071 [CP013242]
3411428
3411353
-
Ala
TGC
-
¡û
>C181013507
CP013841
Bacillota
Clostridium botulinum AM1051 [CP013841]
14297
14372
+
Ala
TGC
-
¡û
>C181013524
CP013841
Bacillota
Clostridium botulinum AM1051 [CP013841]
508911
508986
+
Ala
TGC
-
¡û
>C181013548
CP013841
Bacillota
Clostridium botulinum AM1051 [CP013841]
3768522
3768447
-
Ala
TGC
-
¡û
>C181013911
CP013850
Bacillota
Clostridium botulinum B305 [CP013850]
15324
15399
+
Ala
TGC
-
¡û
>C181013929
CP013850
Bacillota
Clostridium botulinum B305 [CP013850]
490808
490883
+
Ala
TGC
-
¡û
>C181013954
CP013850
Bacillota
Clostridium botulinum B305 [CP013850]
3916295
3916220
-
Ala
TGC
-
¡û
>C181118032
CP025501
Bacillota
Clostridium perfringens EHE-NE18 [CP025501]
544377
544452
+
Ala
TGC
-
¡û
>C181118042
CP025501
Bacillota
Clostridium perfringens EHE-NE18 [CP025501]
631579
631654
+
Ala
TGC
-
¡û
>C181118086
CP025501
Bacillota
Clostridium perfringens EHE-NE18 [CP025501]
270139
270064
-
Ala
TGC
-
¡û
>C181118122
CP025501
Bacillota
Clostridium perfringens EHE-NE18 [CP025501]
17334
17259
-
Ala
TGC
-
¡û
>C181162225
CP028149
Bacillota
Clostridium perfringens JXJA17 [CP028149]
15499
15574
+
Ala
TGC
-
¡û
>C181162235
CP028149
Bacillota
Clostridium perfringens JXJA17 [CP028149]
126243
126318
+
Ala
TGC
-
¡û
>C181162261
CP028149
Bacillota
Clostridium perfringens JXJA17 [CP028149]
3084757
3084682
-
Ala
TGC
-
¡û
>C181162297
CP028149
Bacillota
Clostridium perfringens JXJA17 [CP028149]
2840356
2840281
-
Ala
TGC
-
¡û
>C181195266
CP031097
Bacillota
Clostridium botulinum CFSAN034200 [CP031097]
2605758
2605833
+
Ala
TGC
-
¡û
>C181195269
CP031097
Bacillota
Clostridium botulinum CFSAN034200 [CP031097]
2610989
2611064
+
Ala
TGC
-
¡û
>C181195308
CP031097
Bacillota
Clostridium botulinum CFSAN034200 [CP031097]
2455657
2455582
-
Ala
TGC
-
¡û
>C181214846
LS483461
Bacillota
Clostridium perfringens NCTC2837 [LS483461]
14663
14738
+
Ala
TGC
-
¡û
>C181214856
LS483461
Bacillota
Clostridium perfringens NCTC2837 [LS483461]
91616
91691
+
Ala
TGC
-
¡û
>C181214881
LS483461
Bacillota
Clostridium perfringens NCTC2837 [LS483461]
3045597
3045522
-
Ala
TGC
-
¡û
>C181214917
LS483461
Bacillota
Clostridium perfringens NCTC2837 [LS483461]
2812504
2812429
-
Ala
TGC
-
¡û
>C191010603
CP013686
Bacillota
Clostridium botulinum F1425 [CP013686]
446213
446288
+
Ala
TGC
-
¡û
>C191010621
CP013686
Bacillota
Clostridium botulinum F1425 [CP013686]
921588
921663
+
Ala
TGC
-
¡û
>C191010655
CP013686
Bacillota
Clostridium botulinum F1425 [CP013686]
295699
295624
-
Ala
TGC
-
¡û
>W141557396
JHVC01000030
Bacillota
Clostridium lundense DSM 17049 [JHVC]
31462
31387
-
Ala
TGC
[ENA]
¡û
>W141557408
JHVC01000054
Bacillota
Clostridium lundense DSM 17049 [JHVC]
14
89
+
Ala
TGC
[ENA]
¡û
>W1930012523
MDJF01000021
Bacillota
Clostridium perfringens 13/0815-D [MDJF]
264
189
-
Ala
TGC
[ENA]
¡û
>W1910279364
FQRX01000006
Bacillota
Anaerococcus urinomassiliensis FC4 Marseille-P2143 [FQRX]
1165
1090
-
Ala
TGC
[ENA]
¡û
>W1910693803
MDJF01000001
Bacillota
Clostridium perfringens 13/0815-D [MDJF]
57454
57379
-
Ala
TGC
[ENA]
¡û
>W1910693813
MDJF01000003
Bacillota
Clostridium perfringens 13/0815-D [MDJF]
339
414
+
Ala
TGC
[ENA]
¡û
>W1910693889
MDJF01000026
Bacillota
Clostridium perfringens 13/0815-D [MDJF]
76
1
-
Ala
TGC
[ENA]
¡û
>W1910874047
NDYA01000032
Bacillota
Finegoldia magna T160124 [NDYA]
134
209
+
Ala
TGC
[ENA]
¡û
>W1911498286
OCTP01000011
Bacillota
Anaerococcus sp. Marseille-P3625 [OCTP]
892309
892384
+
Ala
TGC
[ENA]
¡û
>W1911532572
OGVE01000010
Bacillota
Helcococcus massiliensis Marseille-P4590 [OGVE]
1723
1798
+
Ala
TGC
[ENA]
¡û
>W1911613725
POTG01000008
Bacillota
Clostridium botulinum CDC69068 [POTG]
354
429
+
Ala
TGC
[ENA]
¡û
>W1911613729
POTG01000017
Bacillota
Clostridium botulinum CDC69068 [POTG]
313
238
-
Ala
TGC
[ENA]
¡û
>W1911613733
POTG01000020
Bacillota
Clostridium botulinum CDC69068 [POTG]
34274
34199
-
Ala
TGC
[ENA]
¡û
>W1911695186
QMBF01000048
Bacillota
Clostridium tetani 329 [QMBF]
212
137
-
Ala
TGC
[ENA]
¡û
>W1911695220
QMBG01000025
Bacillota
Clostridium tetani 1240 [QMBG]
28082
28007
-
Ala
TGC
[ENA]
¡û
>W1911695238
QMBG01000043
Bacillota
Clostridium tetani 1240 [QMBG]
212
137
-
Ala
TGC
[ENA]
¡û
>W1911695247
QMBG01000051
Bacillota
Clostridium tetani 1240 [QMBG]
76
1
-
Ala
TGC
[ENA]
¡û
>W1911695450
QMBK01000020
Bacillota
Clostridium tetani Strain 3 [QMBK]
28012
27937
-
Ala
TGC
[ENA]
¡û
>W1911695460
QMBK01000029
Bacillota
Clostridium tetani Strain 3 [QMBK]
227
302
+
Ala
TGC
[ENA]
¡û
>W1911695463
QMBK01000034
Bacillota
Clostridium tetani Strain 3 [QMBK]
262
187
-
Ala
TGC
[ENA]
¡û
>W1911695498
QMBL01000016
Bacillota
Clostridium tetani Harvard [QMBL]
27962
27887
-
Ala
TGC
[ENA]
¡û
>W1911695509
QMBL01000026
Bacillota
Clostridium tetani Harvard [QMBL]
433
358
-
Ala
TGC
[ENA]
¡û
>W1911695512
QMBL01000032
Bacillota
Clostridium tetani Harvard [QMBL]
212
137
-
Ala
TGC
[ENA]
¡û
>W1911721911
QRAB01000008
Bacillota
Clostridium botulinum ATCC 17841 [QRAB]
423
498
+
Ala
TGC
[ENA]
¡û
>W1911721927
QRAB01000024
Bacillota
Clostridium botulinum ATCC 17841 [QRAB]
201
276
+
Ala
TGC
[ENA]
¡û
>W1911721929
QRAB01000027
Bacillota
Clostridium botulinum ATCC 17841 [QRAB]
51
126
+
Ala
TGC
[ENA]
¡û
>W1911723320
QRFR01000012
Bacillota
Clostridium perfringens 79385-3 [QRFR]
2
77
+
Ala
TGC
[ENA]
¡û
>W1911723351
QRFR01000043
Bacillota
Clostridium perfringens 79385-3 [QRFR]
1
76
+
Ala
TGC
[ENA]
¡û
>W1911723362
QRFR01000098
Bacillota
Clostridium perfringens 79385-3 [QRFR]
89
164
+
Ala
TGC
[ENA]
¡û
>W1911723608
QRFV01000012
Bacillota
Clostridium perfringens 83921_1_2 [QRFV]
61114
61039
-
Ala
TGC
[ENA]
¡û
>W1911723630
QRFV01000043
Bacillota
Clostridium perfringens 83921_1_2 [QRFV]
1
76
+
Ala
TGC
[ENA]
¡û
>W1911723644
QRFV01000096
Bacillota
Clostridium perfringens 83921_1_2 [QRFV]
89
164
+
Ala
TGC
[ENA]
¡û
>W1911723881
QRHB01000008
Bacillota
Clostridium perfringens 79385-4 [QRHB]
2
77
+
Ala
TGC
[ENA]
¡û
>W1911723902
QRHB01000048
Bacillota
Clostridium perfringens 79385-4 [QRHB]
16780
16705
-
Ala
TGC
[ENA]
¡û
>W1911723920
QRHB01000155
Bacillota
Clostridium perfringens 79385-4 [QRHB]
89
164
+
Ala
TGC
[ENA]
¡û
>W1810179019
PJSL01000001
Bacillota
Clostridium perfringens SOM-NE34 [PJSL]
2543556
2543631
+
Ala
TGC
[ENA]
¡û
>W1810179416
PJSP01000073
Bacillota
Clostridium perfringens SAF-1 [PJSP]
99
174
+
Ala
TGC
[ENA]
¡û
>W1810179425
PJSP01000083
Bacillota
Clostridium perfringens SAF-1 [PJSP]
86
161
+
Ala
TGC
[ENA]
¡û
>W1810179428
PJSP01000084
Bacillota
Clostridium perfringens SAF-1 [PJSP]
99
174
+
Ala
TGC
[ENA]
¡û
>W1810179827
PJSV01000013
Bacillota
Clostridium perfringens NAG-NE31 [PJSV]
74
149
+
Ala
TGC
[ENA]
¡û
>W1810179840
PJSV01000018
Bacillota
Clostridium perfringens NAG-NE31 [PJSV]
18575
18500
-
Ala
TGC
[ENA]
¡û
>W1810179857
PJSV01000041
Bacillota
Clostridium perfringens NAG-NE31 [PJSV]
2956
2881
-
Ala
TGC
[ENA]
¡û
>W1810179860
PJSV01000079
Bacillota
Clostridium perfringens NAG-NE31 [PJSV]
76
1
-
Ala
TGC
[ENA]
¡û
>W1810180032
PJSY01000009
Bacillota
Clostridium perfringens ITX1105-12MP [PJSY]
57691
57616
-
Ala
TGC
[ENA]
¡û
>W1810180087
PJSY01000069
Bacillota
Clostridium perfringens ITX1105-12MP [PJSY]
551
626
+
Ala
TGC
[ENA]
¡û
>W1810180092
PJSY01000201
Bacillota
Clostridium perfringens ITX1105-12MP [PJSY]
121
196
+
Ala
TGC
[ENA]
¡û
>W1810180230
PJTA01000008
Bacillota
Clostridium perfringens FC2 [PJTA]
74
149
+
Ala
TGC
[ENA]
¡û
>W1810180242
PJTA01000012
Bacillota
Clostridium perfringens FC2 [PJTA]
18617
18542
-
Ala
TGC
[ENA]
¡û
>W1810180260
PJTA01000018
Bacillota
Clostridium perfringens FC2 [PJTA]
14351
14426
+
Ala
TGC
[ENA]
¡û
>W1810180265
PJTA01000064
Bacillota
Clostridium perfringens FC2 [PJTA]
76
1
-
Ala
TGC
[ENA]
¡û
>W1810180325
PJTB01000009
Bacillota
Clostridium perfringens EUR-NE15 [PJTB]
297
372
+
Ala
TGC
[ENA]
¡û
>W1810180605
PJTF01000007
Bacillota
Clostridium perfringens 96-7415 [PJTF]
47
122
+
Ala
TGC
[ENA]
¡û
>W1810180643
PJTF01000020
Bacillota
Clostridium perfringens 96-7415 [PJTF]
47
122
+
Ala
TGC
[ENA]
¡û
>W1810180879
PJTI01000012
Bacillota
Clostridium perfringens UDE 95-1372 [PJTI]
74
149
+
Ala
TGC
[ENA]
¡û
>W1810180891
PJTI01000019
Bacillota
Clostridium perfringens UDE 95-1372 [PJTI]
74
149
+
Ala
TGC
[ENA]
¡û
>W1810180899
PJTI01000061
Bacillota
Clostridium perfringens UDE 95-1372 [PJTI]
1398
1473
+
Ala
TGC
[ENA]
¡û
>W1810180907
PJTI01000097
Bacillota
Clostridium perfringens UDE 95-1372 [PJTI]
76
1
-
Ala
TGC
[ENA]
¡û
>W1810180960
PJTJ01000037
Bacillota
Clostridium perfringens T3381 [PJTJ]
19128
19053
-
Ala
TGC
[ENA]
¡û
>W1810181205
PJTM01000012
Bacillota
Clostridium perfringens SOM-NE35 [PJTM]
57893
57818
-
Ala
TGC
[ENA]
¡û
>W1810181705
PJUV01000012
Bacillota
Clostridium perfringens SYD-NE41 [PJUV]
2456208
2456283
+
Ala
TGC
[ENA]
¡û
>W1810394104
PYBM01000001
Bacillota
Clostridium botulinum food_20 [PYBM]
88
163
+
Ala
TGC
[ENA]
¡û
>W1810534685
QDAF01000027
Bacillota
Clostridium perfringens BzA [QDAF]
18981
18906
-
Ala
TGC
[ENA]
¡û
>W1810534691
QDAF01000035
Bacillota
Clostridium perfringens BzA [QDAF]
1
76
+
Ala
TGC
[ENA]
¡û
>W1810700913
QMDO01000001
Bacillota
Vallitalea guaymasensis L81 [QMDO]
2659240
2659313
+
Ala
TGC
[ENA]
¡û
>W1810700928
QMDO01000001
Bacillota
Vallitalea guaymasensis L81 [QMDO]
3506564
3506637
+
Ala
TGC
[ENA]
¡û
>W1511345252
JRGH01000017
Bacillota
Clostridium tetani ATCC 9441 [JRGH]
27922
27847
-
Ala
TGC
[ENA]
¡û
>W1511345260
JRGH01000021
Bacillota
Clostridium tetani ATCC 9441 [JRGH]
378
303
-
Ala
TGC
[ENA]
¡û
>W1511345263
JRGH01000022
Bacillota
Clostridium tetani ATCC 9441 [JRGH]
112
187
+
Ala
TGC
[ENA]
¡û
>W1511345297
JRGI01000009
Bacillota
Clostridium tetani ATCC 453 [JRGI]
106
181
+
Ala
TGC
[ENA]
¡û
>W1511345307
JRGI01000020
Bacillota
Clostridium tetani ATCC 453 [JRGI]
335
410
+
Ala
TGC
[ENA]
¡û
>W1511345312
JRGI01000037
Bacillota
Clostridium tetani ATCC 453 [JRGI]
121
196
+
Ala
TGC
[ENA]
¡û
>W1511565924
LAGG01000092
Bacillota
Clostridium sporogenes CDC24442 [LAGG]
275
350
+
Ala
TGC
[ENA]
¡û
>W1511580450
LARK01000054
Bacillota
Heliobacterium sp. N15.MGS-306 [LARK]
164
238
+
Ala
TGC
[ENA]
¡û
>W1511699268
LGIK01000024
Bacillota
Clostridium botulinum ATCC 17862 [LGIK]
203
278
+
Ala
TGC
[ENA]
¡û
>W1511699270
LGIK01000027
Bacillota
Clostridium botulinum ATCC 17862 [LGIK]
316
241
-
Ala
TGC
[ENA]
¡û
>W1511699272
LGIK01000029
Bacillota
Clostridium botulinum ATCC 17862 [LGIK]
33007
32932
-
Ala
TGC
[ENA]
¡û
>W121009388
AGEI01000004
Bacillota
Helcococcus kunzii ATCC 51366 [AGEI]
5359
5434
+
Ala
TGC
[ENA]
¡û
>W121009409
AGEI01000019
Bacillota
Helcococcus kunzii ATCC 51366 [AGEI]
54264
54339
+
Ala
TGC
[ENA]
¡û
>W1610026276
AUYY01000002
Bacillota
Clostridium botulinum B2 267 [AUYY]
80
155
+
Ala
TGC
[ENA]
¡û
>W1610026351
AUYZ01000002
Bacillota
Clostridium botulinum B2 433 [AUYZ]
80
155
+
Ala
TGC
[ENA]
¡û
>W1610026484
AUZC01000002
Bacillota
Clostridium botulinum F 357 [AUZC]
252
327
+
Ala
TGC
[ENA]
¡û
>W1610100177
CYYX01000008
Bacillota
Clostridium perfringens [CYYX]
490
565
+
Ala
TGC
[ENA]
¡û
>W1610100192
CYYX01000015
Bacillota
Clostridium perfringens [CYYX]
18571
18496
-
Ala
TGC
[ENA]
¡û
>W1610100208
CYYX01000048
Bacillota
Clostridium perfringens [CYYX]
308
233
-
Ala
TGC
[ENA]
¡û
>W1610602581
LFPI01000017
Bacillota
Clostridium botulinum [LFPI]
34231
34156
-
Ala
TGC
[ENA]
¡û
>W1610602599
LFPI01000030
Bacillota
Clostridium botulinum [LFPI]
373
448
+
Ala
TGC
[ENA]
¡û
>W1610603799
LFQB01000020
Bacillota
Clostridium botulinum [LFQB]
28448
28373
-
Ala
TGC
[ENA]
¡û
>W1610604233
LFQV01000069
Bacillota
Clostridium botulinum [LFQV]
9787
9712
-
Ala
TGC
[ENA]
¡û
>W1610604639
LFRB01000033
Bacillota
Clostridium botulinum [LFRB]
28373
28298
-
Ala
TGC
[ENA]
¡û
>W1610661287
LJSZ01000009
Bacillota
Clostridium sporogenes [LJSZ]
29337
29262
-
Ala
TGC
[ENA]
¡û
>W1610661348
LJSZ01000048
Bacillota
Clostridium sporogenes [LJSZ]
1170
1095
-
Ala
TGC
[ENA]
¡û
>W1610661358
LJSZ01000069
Bacillota
Clostridium sporogenes [LJSZ]
346
421
+
Ala
TGC
[ENA]
¡û
>W1710022325
AUYY01000002
Bacillota
Clostridium botulinum B2 267 [AUYY]
80
155
+
Ala
TGC
[ENA]
¡û
>W1710022400
AUYZ01000002
Bacillota
Clostridium botulinum B2 433 [AUYZ]
80
155
+
Ala
TGC
[ENA]
¡û
>W1710022533
AUZC01000002
Bacillota
Clostridium botulinum F 357 [AUZC]
252
327
+
Ala
TGC
[ENA]
¡û
>W1710102932
CYYX01000008
Bacillota
Clostridium perfringens [CYYX]
490
565
+
Ala
TGC
[ENA]
¡û
>W1710102947
CYYX01000015
Bacillota
Clostridium perfringens [CYYX]
18571
18496
-
Ala
TGC
[ENA]
¡û
>W1710102963
CYYX01000048
Bacillota
Clostridium perfringens [CYYX]
308
233
-
Ala
TGC
[ENA]
¡û
>W1710584345
FQVM01000010
Bacillota
Clostridium fallax [FQVM]
185
260
+
Ala
TGC
[ENA]
¡û
>W1710584394
FQVM01000035
Bacillota
Clostridium fallax [FQVM]
21749
21674
-
Ala
TGC
[ENA]
¡û
>W1710600774
FUWT01000024
Bacillota
Clostridium tetani [FUWT]
28153
28078
-
Ala
TGC
[ENA]
¡û
>W1710724097
LFPI01000017
Bacillota
Clostridium botulinum [LFPI]
34231
34156
-
Ala
TGC
[ENA]
¡û
>W1710724115
LFPI01000030
Bacillota
Clostridium botulinum [LFPI]
373
448
+
Ala
TGC
[ENA]
¡û
>W1710726155
LFRB01000033
Bacillota
Clostridium botulinum [LFRB]
28373
28298
-
Ala
TGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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