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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.244299 (224 seq.)
>W1710926744
LOEL01000003
Bacteroidota
Porphyromonas gingivalis [LOEL]
43625
43550
-
Pro
CGG
[ENA]
¡û
>W1711066966
LSDJ01000139
Bacteroidota
Porphyromonadaceae bacterium KA00676 [LSDJ]
11274
11349
+
Pro
CGG
[ENA]
¡û
>W1711067007
LSDK01000139
Bacteroidota
Porphyromonas somerae [LSDK]
11274
11349
+
Pro
CGG
[ENA]
¡û
>W1711135280
LUYT01000030
Bacteroidota
Bacteroidales bacterium Bact_02 [LUYT]
144747
144672
-
Pro
CGG
[ENA]
¡û
>W1711270634
LZEK01000022
Bacteroidota
Macellibacteroides sp. HH-ZS [LZEK]
57681
57606
-
Pro
CGG
[ENA]
¡û
>W1711502935
MKTE01000014
Bacteroidota
Bacteroidia bacterium 44-10 [MKTE]
22594
22519
-
Pro
CGG
[ENA]
¡û
>W1712084872
NHRU01000005
Bacteroidota
Porphyromonas gingivalis [NHRU]
58015
57940
-
Pro
CGG
[ENA]
¡û
>W131165912
ARBY01000020
Bacteroidota
Porphyromonas macacae DSM 20710 [ARBY]
28125
28050
-
Pro
CGG
[ENA]
¡û
>W131175787
ARJN01000034
Bacteroidota
Porphyromonas gulae DSM 15663 [ARJN]
20345
20270
-
Pro
CGG
[ENA]
¡û
>C016373
AE015924
Bacteroidota
Porphyromonas gingivalis W83 [AE015924]
2260655
2260730
+
Pro
CGG
[Ensembl]
¡û
>WENV180005993
FLRX01080667
[FLRX] metagenome; saliva
335
262
-
Pro
CGG
[ENA]
¢þ
>WENV180006857
FLRZ01001685
[FLRZ] metagenome; saliva
2
75
+
Pro
CGG
[ENA]
¢þ
>WENV180010938
FLSI01025683
[FLSI] metagenome; saliva
817
744
-
Pro
CGG
[ENA]
¢þ
>WENV180118717
OASD01000524
[OASD] human gut metagenome; ENVO:feces
8957
9030
+
Pro
CGG
[ENA]
¢þ
>WENV180118757
OASD01000776
[OASD] human gut metagenome; ENVO:feces
7103
7030
-
Pro
CGG
[ENA]
¢þ
>WENV180402553
OBRP01008224
[OBRP] human gut metagenome; ENVO:feces
146
73
-
Pro
CGG
[ENA]
¢þ
>W141042625
AMEQ01000018
Bacteroidota
Porphyromonas catoniae F0037 [AMEQ]
26435
26362
-
Pro
CGG
[ENA]
¡û
>WENV180526656
OCHI01043658
[OCHI] human gut metagenome; human gut
74
1
-
Pro
CGG
[ENA]
¢þ
>WENV180548385
OCIW01006781
[OCIW] human oral metagenome; human oral
62
135
+
Pro
CGG
[ENA]
¢þ
>WENV180563562
OCLC01090384
[OCLC] human gut metagenome; human gut
78
151
+
Pro
CGG
[ENA]
¢þ
>WENV180597684
OCPL01019810
[OCPL] human gut metagenome; ENVO:feces
454
527
+
Pro
CGG
[ENA]
¢þ
>WENV180705159
ODEJ01001095
[ODEJ] human metagenome; G_DNA_Tongue dorsum
2028
1953
-
Pro
CGG
[ENA]
¢þ
>WENV180717713
ODGE01000904
[ODGE] human metagenome; G_DNA_Buccal mucosa
163
238
+
Pro
CGG
[ENA]
¢þ
>WENV180718311
ODGG01000020
[ODGG] human metagenome; G_DNA_Buccal mucosa
48542
48467
-
Pro
CGG
[ENA]
¢þ
>WENV180722387
ODGM01000200
[ODGM] human metagenome; G_DNA_Palatine Tonsils
25536
25611
+
Pro
CGG
[ENA]
¢þ
>WENV180726543
ODGU01000085
[ODGU] human metagenome; G_DNA_Supragingival plaque
51195
51268
+
Pro
CGG
[ENA]
¢þ
>WENV180726652
ODGU01000235
[ODGU] human metagenome; G_DNA_Supragingival plaque
20053
20126
+
Pro
CGG
[ENA]
¢þ
>WENV180726883
ODGU01000907
[ODGU] human metagenome; G_DNA_Supragingival plaque
7864
7937
+
Pro
CGG
[ENA]
¢þ
>WENV180727588
ODGU01008281
[ODGU] human metagenome; G_DNA_Supragingival plaque
1838
1913
+
Pro
CGG
[ENA]
¢þ
>WENV180733368
ODGZ01000010
[ODGZ] human metagenome; G_DNA_Supragingival plaque
34256
34181
-
Pro
CGG
[ENA]
¢þ
>WENV180733511
ODGZ01000143
[ODGZ] human metagenome; G_DNA_Supragingival plaque
26708
26781
+
Pro
CGG
[ENA]
¢þ
>WENV180735596
ODHB01000077
[ODHB] human metagenome; G_DNA_Supragingival plaque
33557
33482
-
Pro
CGG
[ENA]
¢þ
>WENV180738790
ODHD01000526
[ODHD] human metagenome; G_DNA_Supragingival plaque
7298
7371
+
Pro
CGG
[ENA]
¢þ
>WENV180746265
ODHM01037054
[ODHM] human metagenome; G_DNA_Buccal mucosa
197
272
+
Pro
CGG
[ENA]
¢þ
>WENV180754561
ODHU01000006
[ODHU] human metagenome; G_DNA_Supragingival plaque
28586
28659
+
Pro
CGG
[ENA]
¢þ
>W141074448
ASYL01000099
Bacteroidota
Porphyromonas gingivalis SJD2 [ASYL]
21556
21481
-
Pro
CGG
[ENA]
¡û
>WENV180765780
ODID01000836
[ODID] human metagenome; G_DNA_Attached/Keratinized gingiva
1566
1643
+
Pro
CGG
[ENA]
¢þ
>WENV180773851
ODIJ01002983
[ODIJ] human metagenome; G_DNA_Tongue dorsum
1311
1236
-
Pro
CGG
[ENA]
¢þ
>WENV180778381
ODIM01004839
[ODIM] human metagenome; G_DNA_Supragingival plaque
736
661
-
Pro
CGG
[ENA]
¢þ
>WENV180782409
ODIQ01000005
[ODIQ] human metagenome; G_DNA_Tongue dorsum
175613
175688
+
Pro
CGG
[ENA]
¢þ
>WENV180790188
ODIT01004979
[ODIT] human metagenome; G_DNA_Tongue dorsum
1731
1806
+
Pro
CGG
[ENA]
¢þ
>WENV180795455
ODJB01000005
[ODJB] human metagenome; G_DNA_Supragingival plaque
143044
143119
+
Pro
CGG
[ENA]
¢þ
>WENV180795470
ODJB01000008
[ODJB] human metagenome; G_DNA_Supragingival plaque
94903
94978
+
Pro
CGG
[ENA]
¢þ
>WENV180800860
ODJD01001889
[ODJD] human metagenome; G_DNA_Supragingival plaque
4941
4866
-
Pro
CGG
[ENA]
¢þ
>WENV180803231
ODJE01064448
[ODJE] human metagenome; G_DNA_Tongue dorsum
483
408
-
Pro
CGG
[ENA]
¢þ
>WENV180810567
ODJM01000001
[ODJM] human metagenome; G_DNA_Buccal mucosa
240490
240565
+
Pro
CGG
[ENA]
¢þ
>WENV180830674
ODKB01009113
[ODKB] human metagenome; G_DNA_Tongue dorsum
624
699
+
Pro
CGG
[ENA]
¢þ
>WENV180842599
ODKM01074033
[ODKM] human metagenome; G_DNA_Buccal mucosa
20
95
+
Pro
CGG
[ENA]
¢þ
>WENV180852066
ODKW01000004
[ODKW] human metagenome; G_DNA_Tongue dorsum
100467
100392
-
Pro
CGG
[ENA]
¢þ
>WENV180854793
ODKX01010956
[ODKX] human metagenome; G_DNA_Tongue dorsum
1191
1266
+
Pro
CGG
[ENA]
¢þ
>WENV180855929
ODKZ01000478
[ODKZ] human metagenome; G_DNA_Tongue dorsum
11824
11899
+
Pro
CGG
[ENA]
¢þ
>WENV180858627
ODLC01016592
[ODLC] human metagenome; G_DNA_Tongue dorsum
8
83
+
Pro
CGG
[ENA]
¢þ
>WENV180859086
ODLD01000010
[ODLD] human metagenome; G_DNA_Supragingival plaque
76459
76534
+
Pro
CGG
[ENA]
¢þ
>WENV180863382
ODLH01000039
[ODLH] human metagenome; G_DNA_Tongue dorsum
68483
68558
+
Pro
CGG
[ENA]
¢þ
>WENV180865169
ODLI01038018
[ODLI] human metagenome; G_DNA_Buccal mucosa
33
106
+
Pro
CGG
[ENA]
¢þ
>WENV180897596
ODNI01043140
[ODNI] human metagenome; G_DNA_Tongue dorsum
311
386
+
Pro
CGG
[ENA]
¢þ
>WENV180902639
ODOK01114243
[ODOK] human metagenome; G_DNA_Tongue dorsum
109
34
-
Pro
CGG
[ENA]
¢þ
>WENV180917144
ODTD01005230
[ODTD] human metagenome; G_DNA_Tongue dorsum
3368
3293
-
Pro
CGG
[ENA]
¢þ
>WENV180922755
ODTJ01010285
[ODTJ] human metagenome; G_DNA_Supragingival plaque
817
890
+
Pro
CGG
[ENA]
¢þ
>WENV180923792
ODTK01000181
[ODTK] human metagenome; G_DNA_Supragingival plaque
24397
24324
-
Pro
CGG
[ENA]
¢þ
>WENV180923835
ODTK01000233
[ODTK] human metagenome; G_DNA_Supragingival plaque
11303
11378
+
Pro
CGG
[ENA]
¢þ
>WENV180924046
ODTK01000841
[ODTK] human metagenome; G_DNA_Supragingival plaque
4431
4358
-
Pro
CGG
[ENA]
¢þ
>WENV180927750
ODTM01003228
[ODTM] human metagenome; G_DNA_Supragingival plaque
5347
5420
+
Pro
CGG
[ENA]
¢þ
>WENV180931487
ODTP01004843
[ODTP] human metagenome; G_DNA_Tongue dorsum
4302
4227
-
Pro
CGG
[ENA]
¢þ
>WENV180937320
ODTV01068847
[ODTV] human metagenome; G_DNA_Buccal mucosa
285
210
-
Pro
CGG
[ENA]
¢þ
>WENV180937666
ODTX01000022
[ODTX] human metagenome; G_DNA_Supragingival plaque
98917
98844
-
Pro
CGG
[ENA]
¢þ
>WENV180938047
ODTX01000460
[ODTX] human metagenome; G_DNA_Supragingival plaque
2801
2728
-
Pro
CGG
[ENA]
¢þ
>WENV180943211
ODUC01000028
[ODUC] human metagenome; G_DNA_Supragingival plaque
60681
60754
+
Pro
CGG
[ENA]
¢þ
>WENV180946396
ODUD01067380
[ODUD] human metagenome; G_DNA_Tongue dorsum
153
78
-
Pro
CGG
[ENA]
¢þ
>WENV180947623
ODUG01000001
[ODUG] human metagenome; G_DNA_Tongue dorsum
39902
39827
-
Pro
CGG
[ENA]
¢þ
>WENV180948816
ODUG01004297
[ODUG] human metagenome; G_DNA_Tongue dorsum
5327
5402
+
Pro
CGG
[ENA]
¢þ
>WENV180950484
ODUH01000014
[ODUH] human metagenome; G_DNA_Subgingival plaque
45904
45979
+
Pro
CGG
[ENA]
¢þ
>WENV180951090
ODUH01008322
[ODUH] human metagenome; G_DNA_Subgingival plaque
3042
2969
-
Pro
CGG
[ENA]
¢þ
>WENV180954358
ODUJ01002013
[ODUJ] human metagenome; G_DNA_Tongue dorsum
4226
4151
-
Pro
CGG
[ENA]
¢þ
>WENV180973563
ODUW01008231
[ODUW] human metagenome; G_DNA_Supragingival plaque
3448
3523
+
Pro
CGG
[ENA]
¢þ
>WENV180976108
ODUY01046980
[ODUY] human metagenome; G_DNA_Supragingival plaque
757
684
-
Pro
CGG
[ENA]
¢þ
>WENV180984715
ODVJ01000001
[ODVJ] human metagenome; G_DNA_Tongue dorsum
315205
315130
-
Pro
CGG
[ENA]
¢þ
>WENV180986791
ODVK01000836
[ODVK] human metagenome; G_DNA_Supragingival plaque
585
658
+
Pro
CGG
[ENA]
¢þ
>WENV180988729
ODVL01007862
[ODVL] human metagenome; G_DNA_Tongue dorsum
577
502
-
Pro
CGG
[ENA]
¢þ
>WENV180990936
ODVN01009206
[ODVN] human metagenome; G_DNA_Tongue dorsum
993
1068
+
Pro
CGG
[ENA]
¢þ
>WENV180992435
ODVP01006430
[ODVP] human metagenome; G_DNA_Buccal mucosa
774
849
+
Pro
CGG
[ENA]
¢þ
>WENV180999751
ODVT01059096
[ODVT] human metagenome; G_DNA_Buccal mucosa
466
393
-
Pro
CGG
[ENA]
¢þ
>WENV181005827
ODWA01000010
[ODWA] human metagenome; G_DNA_Buccal mucosa
4499
4574
+
Pro
CGG
[ENA]
¢þ
>WENV181010462
ODWH01019808
[ODWH] human metagenome; G_DNA_Buccal mucosa
302
377
+
Pro
CGG
[ENA]
¢þ
>WENV181018656
ODWU01000012
[ODWU] human metagenome; G_DNA_Supragingival plaque
112491
112566
+
Pro
CGG
[ENA]
¢þ
>WENV181021079
ODWV01002039
[ODWV] human metagenome; G_DNA_Tongue dorsum
2813
2738
-
Pro
CGG
[ENA]
¢þ
>WENV181025825
ODXB01046381
[ODXB] human metagenome; G_DNA_Buccal mucosa
103
178
+
Pro
CGG
[ENA]
¢þ
>WENV181027377
ODXD01000469
[ODXD] human metagenome; G_DNA_Buccal mucosa
1802
1727
-
Pro
CGG
[ENA]
¢þ
>WENV181029695
ODXF01002029
[ODXF] human metagenome; G_DNA_Supragingival plaque
4115
4040
-
Pro
CGG
[ENA]
¢þ
>WENV181033039
ODXN01002097
[ODXN] human metagenome; G_DNA_Tongue dorsum
5383
5308
-
Pro
CGG
[ENA]
¢þ
>WENV181039685
ODXQ01040801
[ODXQ] human metagenome; G_DNA_Tongue dorsum
718
793
+
Pro
CGG
[ENA]
¢þ
>WENV181042981
ODXU01023237
[ODXU] human metagenome; G_DNA_Buccal mucosa
777
702
-
Pro
CGG
[ENA]
¢þ
>WENV181051737
ODYE01001722
[ODYE] human metagenome; G_DNA_Tongue dorsum
4363
4288
-
Pro
CGG
[ENA]
¢þ
>WENV181052822
ODYG01041637
[ODYG] human metagenome; G_DNA_Tongue dorsum
78
153
+
Pro
CGG
[ENA]
¢þ
>WENV181066663
ODZI01000739
[ODZI] human metagenome; G_DNA_Supragingival plaque
2
77
+
Pro
CGG
[ENA]
¢þ
>WENV181068902
ODZZ01004513
[ODZZ] human metagenome; G_DNA_Tongue dorsum
98
23
-
Pro
CGG
[ENA]
¢þ
>WENV181070200
OEAE01000437
[OEAE] human metagenome; G_DNA_Supragingival plaque
16867
16940
+
Pro
CGG
[ENA]
¢þ
>WENV181073487
OEAO01000315
[OEAO] human metagenome; G_DNA_Tongue dorsum
12584
12509
-
Pro
CGG
[ENA]
¢þ
>WENV181078230
OEAQ01036942
[OEAQ] human metagenome; G_DNA_Buccal mucosa
167
92
-
Pro
CGG
[ENA]
¢þ
>WENV181078406
OEAS01000038
[OEAS] human metagenome; G_DNA_Supragingival plaque
71798
71873
+
Pro
CGG
[ENA]
¢þ
>WENV181078471
OEAS01000086
[OEAS] human metagenome; G_DNA_Supragingival plaque
30012
30085
+
Pro
CGG
[ENA]
¢þ
>WENV181078794
OEAS01000555
[OEAS] human metagenome; G_DNA_Supragingival plaque
14187
14260
+
Pro
CGG
[ENA]
¢þ
>WENV181079055
OEAS01001633
[OEAS] human metagenome; G_DNA_Supragingival plaque
8927
8852
-
Pro
CGG
[ENA]
¢þ
>WENV181084998
OEAX01000850
[OEAX] human metagenome; G_DNA_Tongue dorsum
12175
12100
-
Pro
CGG
[ENA]
¢þ
>WENV181090323
OEBC01000186
[OEBC] human metagenome; G_DNA_Supragingival plaque
2699
2774
+
Pro
CGG
[ENA]
¢þ
>WENV181091081
OEBC01012183
[OEBC] human metagenome; G_DNA_Supragingival plaque
648
723
+
Pro
CGG
[ENA]
¢þ
>WENV181094322
OEBY01000073
[OEBY] human metagenome; G_DNA_Tongue dorsum
71560
71485
-
Pro
CGG
[ENA]
¢þ
>WENV181101260
OECM01032073
[OECM] human metagenome; G_DNA_Buccal mucosa
206
131
-
Pro
CGG
[ENA]
¢þ
>WENV181102759
OECT01009788
[OECT] human metagenome; G_DNA_Tongue dorsum
116
41
-
Pro
CGG
[ENA]
¢þ
>WENV181106833
OEEI01000340
[OEEI] human metagenome; G_DNA_Supragingival plaque
23810
23883
+
Pro
CGG
[ENA]
¢þ
>WENV181113195
OEEL01014722
[OEEL] human metagenome; G_DNA_Tongue dorsum
1679
1604
-
Pro
CGG
[ENA]
¢þ
>WENV181114783
OEEO01005127
[OEEO] human metagenome; G_DNA_Supragingival plaque
3999
3924
-
Pro
CGG
[ENA]
¢þ
>WENV181119678
OEFJ01000003
[OEFJ] human metagenome; G_DNA_Attached/Keratinized gingiva
105191
105118
-
Pro
CGG
[ENA]
¢þ
>WENV181120905
OEFL01000002
[OEFL] human metagenome; G_DNA_Supragingival plaque
134085
134012
-
Pro
CGG
[ENA]
¢þ
>WENV181125640
OEFU01007363
[OEFU] human metagenome; G_DNA_Saliva
152
227
+
Pro
CGG
[ENA]
¢þ
>WENV181139862
OEGN01030534
[OEGN] human metagenome; G_DNA_Tongue dorsum
1020
1095
+
Pro
CGG
[ENA]
¢þ
>WENV181141247
OEGT01002127
[OEGT] human metagenome; G_DNA_Throat
4174
4249
+
Pro
CGG
[ENA]
¢þ
>WENV181146032
OEHQ01000588
[OEHQ] human metagenome; G_DNA_Supragingival plaque
18522
18595
+
Pro
CGG
[ENA]
¢þ
>WENV181156425
OEIE01015930
[OEIE] human metagenome; G_DNA_Supragingival plaque
109
34
-
Pro
CGG
[ENA]
¢þ
>WENV181157002
OEIG01000067
[OEIG] human metagenome; G_DNA_Hard palate
30856
30931
+
Pro
CGG
[ENA]
¢þ
>WENV181158435
OEIH01001331
[OEIH] human metagenome; G_DNA_Supragingival plaque
165
90
-
Pro
CGG
[ENA]
¢þ
>WENV181175740
OEJQ01026618
[OEJQ] human metagenome; G_DNA_Tongue dorsum
246
171
-
Pro
CGG
[ENA]
¢þ
>WENV181179526
OEJT01006830
[OEJT] human metagenome; G_DNA_Supragingival plaque
93
20
-
Pro
CGG
[ENA]
¢þ
>WENV181180618
OEJU01000378
[OEJU] human metagenome; G_DNA_Supragingival plaque
124
51
-
Pro
CGG
[ENA]
¢þ
>W141145664
AWUV01000024
Bacteroidota
Porphyromonas gingivalis F0569 [AWUV]
37436
37511
+
Pro
CGG
[ENA]
¡û
>W141145778
AWUX01000112
Bacteroidota
Porphyromonas sp. oral taxon 278 oral taxon 278 str. W7784 [AWUX]
29042
28969
-
Pro
CGG
[ENA]
¡û
>W141145993
AWVD01000089
Bacteroidota
Porphyromonas gingivalis F0566 [AWVD]
286
361
+
Pro
CGG
[ENA]
¡û
>WENV181503516
OGGJ01003365
[OGGJ] metagenome; Human gut stool
3027
3100
+
Pro
CGG
[ENA]
¢þ
>WENV181692511
OGPA01000241
[OGPA] human gut metagenome; faeces
53007
53080
+
Pro
CGG
[ENA]
¢þ
>W141168651
AXVC01000018
Bacteroidota
Porphyromonas uenonis DSM 23387 [AXVC]
129425
129352
-
Pro
CGG
[ENA]
¡û
>WENV181908731
OGYB01000458
[OGYB] human gut metagenome; faeces
18021
18094
+
Pro
CGG
[ENA]
¢þ
>WENV182005515
OHBE01006457
[OHBE] human gut metagenome; faeces
140
213
+
Pro
CGG
[ENA]
¢þ
>WENV182017525
OHBW01000317
[OHBW] human gut metagenome; feces
18822
18749
-
Pro
CGG
[ENA]
¢þ
>WENV182030878
OHCS01000493
[OHCS] human gut metagenome; feces
153
226
+
Pro
CGG
[ENA]
¢þ
>WENV182030879
OHCS01000493
[OHCS] human gut metagenome; feces
3950
4023
+
Pro
CGG
[ENA]
¢þ
>WENV182051690
OHEG01004371
[OHEG] human gut metagenome; feces
143
70
-
Pro
CGG
[ENA]
¢þ
>WENV182056112
OHEM01008590
[OHEM] human gut metagenome; feces
78
151
+
Pro
CGG
[ENA]
¢þ
>WENV182085817
OHGS01011167
[OHGS] human gut metagenome; feces
1193
1120
-
Pro
CGG
[ENA]
¢þ
>WENV182126549
OHJT01038479
[OHJT] human gut metagenome; feces
705
778
+
Pro
CGG
[ENA]
¢þ
>WENV182180328
OHNO01000476
[OHNO] human gut metagenome; feces
18147
18074
-
Pro
CGG
[ENA]
¢þ
>WENV182182096
OHNQ01002273
[OHNQ] human gut metagenome; feces
3867
3940
+
Pro
CGG
[ENA]
¢þ
>WENV182213771
OHQH01022394
[OHQH] human gut metagenome; feces
757
830
+
Pro
CGG
[ENA]
¢þ
>WENV182241449
OHSF01027779
[OHSF] human gut metagenome; feces
493
420
-
Pro
CGG
[ENA]
¢þ
>WENV182241938
OHSG01004426
[OHSG] human gut metagenome; feces
143
70
-
Pro
CGG
[ENA]
¢þ
>WENV182249632
OHSQ01002815
[OHSQ] human gut metagenome; feces
1803
1876
+
Pro
CGG
[ENA]
¢þ
>WENV182258197
OHTG01006960
[OHTG] human gut metagenome; feces
887
960
+
Pro
CGG
[ENA]
¢þ
>W141225752
BAJM01000043
Bacteroidota
Porphyromonas uenonis JCM 13868 [BAJM]
19206
19133
-
Pro
CGG
[ENA]
¡û
>W141226975
BAKQ01000026
Bacteroidota
Porphyromonas macacae JCM 13914 [BAKQ]
22649
22574
-
Pro
CGG
[ENA]
¡û
>W141227052
BAKS01000011
Bacteroidota
Porphyromonas macacae JCM 15984 [BAKS]
14666
14741
+
Pro
CGG
[ENA]
¡û
>W141227324
BAKX01000018
Bacteroidota
Porphyromonas gingivicanis JCM 15907 [BAKX]
1343
1416
+
Pro
CGG
[ENA]
¡û
>WENV182428780
OIIB01000042
[OIIB] human gut metagenome; human gut
6792
6865
+
Pro
CGG
[ENA]
¢þ
>WENV182432634
OIIP01000120
[OIIP] human gut metagenome; human gut
16320
16247
-
Pro
CGG
[ENA]
¢þ
>WENV182505154
OIUX01000135
[OIUX] human gut metagenome; human gut
6792
6865
+
Pro
CGG
[ENA]
¢þ
>WENV182749283
OJQX01023627
[OJQX] human gut metagenome; stool sample
75
2
-
Pro
CGG
[ENA]
¢þ
>WENV182873722
OKRW01001226
[OKRW] human gut metagenome; faeces
75
2
-
Pro
CGG
[ENA]
¢þ
>WENV182881364
OKSA01007849
[OKSA] human gut metagenome; faeces
1988
2061
+
Pro
CGG
[ENA]
¢þ
>WENV182969632
OKXB01046900
[OKXB] human gut metagenome; human gut
733
806
+
Pro
CGG
[ENA]
¢þ
>WENV182984348
OKZM01000140
[OKZM] human gut metagenome; human gut
17653
17580
-
Pro
CGG
[ENA]
¢þ
>C08007273
AP009380
Bacteroidota
Porphyromonas gingivalis ATCC 33277 [AP009380]
212909
212984
+
Pro
CGG
[Ensembl]
¡û
>WENV183206906
OLQA01003935
[OLQA] human gut metagenome; faeces
3894
3967
+
Pro
CGG
[ENA]
¢þ
>WENV183224030
OLQN01000603
[OLQN] human gut metagenome; faeces
10674
10601
-
Pro
CGG
[ENA]
¢þ
>WENV183445184
OMCP01003263
[OMCP] human gut metagenome; feces
3221
3294
+
Pro
CGG
[ENA]
¢þ
>WENV183477735
OMFC01012705
[OMFC] human gut metagenome; feces
1269
1196
-
Pro
CGG
[ENA]
¢þ
>WENV183508834
OMHF01008222
[OMHF] human oral metagenome; human oral
426
353
-
Pro
CGG
[ENA]
¢þ
>WENV183509165
OMHG01010008
[OMHG] human oral metagenome; human oral
203
276
+
Pro
CGG
[ENA]
¢þ
>W141382673
JDFF01000024
Bacteroidota
Porphyromonas catoniae ATCC 51270 [JDFF]
195302
195375
+
Pro
CGG
[ENA]
¡û
>WENV170655824
JTFN01080274
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
233
158
-
Pro
CGG
[ENA]
¢þ
>WENV170656620
JTFO01028825
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
645
570
-
Pro
CGG
[ENA]
¢þ
>WENV170657413
JTFO01144065
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
2
77
+
Pro
CGG
[ENA]
¢þ
>WENV170670153
LAHS01069511
[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
203
128
-
Pro
CGG
[ENA]
¢þ
>C181102076
CP024591
Bacteroidota
Porphyromonas gingivalis KCOM 2802 [CP024591]
1210198
1210271
+
Pro
CGG
-
¡û
>C181102279
CP024595
Bacteroidota
Porphyromonas gingivalis KCOM 3001 [CP024595]
2009360
2009433
+
Pro
CGG
-
¡û
>C181102414
CP024598
Bacteroidota
Porphyromonas gingivalis KCOM 2798 [CP024598]
882482
882555
+
Pro
CGG
-
¡û
>C181123577
CP025930
Bacteroidota
Porphyromonas gingivalis ATCC 33277 [CP025930]
212908
212981
+
Pro
CGG
-
¡û
>C181123654
CP025931
Bacteroidota
Porphyromonas gingivalis TDC 60 [CP025931]
1782602
1782529
-
Pro
CGG
-
¡û
>C181123695
CP025932
Bacteroidota
Porphyromonas gingivalis W83 [CP025932]
2261178
2261251
+
Pro
CGG
-
¡û
>W09128348
ACLR01000214
Bacteroidota
Porphyromonas uenonis Mar-60 [ACLR]
33154
33229
+
Pro
CGG
[ENA]
¡û
>W09132139
ACNN01000026
Bacteroidota
Porphyromonas endodontalis ATCC 35406 [ACNN]
20126
20051
-
Pro
CGG
[ENA]
¡û
>W1910279827
FQSE01000011
Bacteroidota
Parabacteroides timonensis Marseille-P3136 Marseille-P3236 [FQSE]
569237
569164
-
Pro
CGG
[ENA]
¡û
>W1910371006
FUFB01000007
Bacteroidota
Porphyromonas gingivalis 3_3 [FUFB]
58729
58802
+
Pro
CGG
[ENA]
¡û
>W1910371058
FUFC01000011
Bacteroidota
Porphyromonas gingivalis 3A1 [FUFC]
82750
82823
+
Pro
CGG
[ENA]
¡û
>W1910371098
FUFD01000025
Bacteroidota
Porphyromonas gingivalis 7BTORR [FUFD]
5592
5519
-
Pro
CGG
[ENA]
¡û
>W1910371132
FUFE01000009
Bacteroidota
Porphyromonas gingivalis 11A [FUFE]
36291
36364
+
Pro
CGG
[ENA]
¡û
>W1910371270
FUFH01000034
Bacteroidota
Porphyromonas gingivalis ATCC 49417 [FUFH]
372
445
+
Pro
CGG
[ENA]
¡û
>W1910371372
FUFJ01000051
Bacteroidota
Porphyromonas gingivalis AFR5B1 [FUFJ]
37015
36942
-
Pro
CGG
[ENA]
¡û
>W1910471911
FXDJ01000007
Bacteroidota
Massilibacteroides vaginae MV12 [FXDJ]
310231
310304
+
Pro
CGG
[ENA]
¡û
>W1911247430
NSLM01000018
Bacteroidota
Porphyromonas gingivalis WW5019 [NSLM]
43745
43672
-
Pro
CGG
[ENA]
¡û
>W1911247538
NSLP01000005
Bacteroidota
Porphyromonas gingivalis WW3040 [NSLP]
58111
58038
-
Pro
CGG
[ENA]
¡û
>W1911247669
NSLS01000006
Bacteroidota
Porphyromonas gingivalis WW2903 [NSLS]
44006
43933
-
Pro
CGG
[ENA]
¡û
>W1911247848
NSLW01000006
Bacteroidota
Porphyromonas gingivalis WW2842 [NSLW]
98640
98567
-
Pro
CGG
[ENA]
¡û
>W1911709141
QPGS01000047
Bacteroidota
Porphyromonas gingivalis 381OKJP [QPGS]
686
759
+
Pro
CGG
[ENA]
¡û
>W1810573706
QEKY01000001
Bacteroidota
Porphyromonas loveana DSM 28520 [QEKY]
58360
58433
+
Pro
CGG
[ENA]
¡û
>W1810842851
QSWF01000023
Bacteroidota
Parabacteroides gordonii OM02-37 [QSWF]
9230
9157
-
Pro
CGG
[ENA]
¡û
>C11117324
AP012203
Bacteroidota
Porphyromonas gingivalis TDC60 [AP012203]
1309651
1309576
-
Pro
CGG
[Ensembl]
¡û
>W1511335994
JQZV01000006
Bacteroidota
Porphyromonas canoris COT-108 OH2762 [JQZV]
18295
18368
+
Pro
CGG
[ENA]
¡û
>W1511336025
JQZW01000002
Bacteroidota
Porphyromonas gingivicanis COT-022 OH1391 [JQZW]
73887
73960
+
Pro
CGG
[ENA]
¡û
>W1511336078
JQZX01000006
Bacteroidota
Porphyromonas canoris COT-108 OH1224 [JQZX]
206826
206753
-
Pro
CGG
[ENA]
¡û
>W1511336137
JQZY01000019
Bacteroidota
Porphyromonas sp. COT-052 OH4946 [JQZY]
26109
26034
-
Pro
CGG
[ENA]
¡û
>W1511336408
JRAF01000049
Bacteroidota
Porphyromonas gulae COT-052 OH3498 [JRAF]
172980
172905
-
Pro
CGG
[ENA]
¡û
>W1511336469
JRAG01000038
Bacteroidota
Porphyromonas gulae COT-052 OH1355 [JRAG]
12484
12559
+
Pro
CGG
[ENA]
¡û
>W1511336492
JRAH01000019
Bacteroidota
Porphyromonas sp. COT-108 OH1349 [JRAH]
209929
209856
-
Pro
CGG
[ENA]
¡û
>W1511336640
JRAK01000123
Bacteroidota
Porphyromonas gulae COT-052 OH3439 [JRAK]
5156
5231
+
Pro
CGG
[ENA]
¡û
>W1511336655
JRAL01000015
Bacteroidota
Porphyromonas gulae COT-052 OH4119 [JRAL]
48406
48481
+
Pro
CGG
[ENA]
¡û
>W1511336778
JRAP01000005
Bacteroidota
Porphyromonas sp. COT-108 OH2963 [JRAP]
18181
18254
+
Pro
CGG
[ENA]
¡û
>W1511336950
JRAT01000017
Bacteroidota
Porphyromonas gulae COT-052 OH3856 [JRAT]
7050
6975
-
Pro
CGG
[ENA]
¡û
>W1511343790
JRFA01000008
Bacteroidota
Porphyromonas macacae COT-192 OH2859 [JRFA]
15833
15908
+
Pro
CGG
[ENA]
¡û
>W1511343853
JRFB01000011
Bacteroidota
Porphyromonas macacae COT-192 OH2631 [JRFB]
616300
616375
+
Pro
CGG
[ENA]
¡û
>W1511343922
JRFD01000022
Bacteroidota
Porphyromonas gulae COT-052 OH2857 [JRFD]
132052
132127
+
Pro
CGG
[ENA]
¡û
>C161018128
CP007756
Bacteroidota
Porphyromonas gingivalis HG66 [CP007756]
663591
663666
+
Pro
CGG
[Ensembl]
¡û
>C161046918
CP012889
Bacteroidota
Porphyromonas gingivalis 381 [CP012889]
212909
212984
+
Pro
CGG
-
¡û
>W121112265
ALKJ01000019
Bacteroidota
Porphyromonas sp. oral taxon 279 oral taxon 279 str. F0450 [ALKJ]
348703
348778
+
Pro
CGG
[ENA]
¡û
>W1610004033
AGES01000015
Bacteroidota
Parabacteroides sp. HGS0025 [AGES]
42701
42626
-
Pro
CGG
[ENA]
¡û
>W1610060535
BCBV01000038
Bacteroidota
Porphyromonas gingivalis [BCBV]
14047
13972
-
Pro
CGG
[ENA]
¡û
>W1610784237
LOEL01000003
Bacteroidota
Porphyromonas gingivalis [LOEL]
43625
43550
-
Pro
CGG
[ENA]
¡û
>W1610907536
LSDJ01000139
Bacteroidota
Porphyromonadaceae bacterium KA00676 [LSDJ]
11274
11349
+
Pro
CGG
[ENA]
¡û
>W1610907577
LSDK01000139
Bacteroidota
Porphyromonas somerae [LSDK]
11274
11349
+
Pro
CGG
[ENA]
¡û
>W1610946400
LUYT01000030
Bacteroidota
Bacteroidales bacterium Bact_02 [LUYT]
144747
144672
-
Pro
CGG
[ENA]
¡û
>W1710004542
AGES01000015
Bacteroidota
Parabacteroides sp. HGS0025 [AGES]
42701
42626
-
Pro
CGG
[ENA]
¡û
>W1710017869
ASYM01000005
Bacteroidota
Porphyromonas gingivalis SJD4 [ASYM]
324
399
+
Pro
CGG
[ENA]
¡û
>W1710017965
ASYO01000067
Bacteroidota
Porphyromonas gingivalis SJD11 [ASYO]
35722
35797
+
Pro
CGG
[ENA]
¡û
>W1710018008
ASYP01000060
Bacteroidota
Porphyromonas gingivalis SJD12 [ASYP]
25102
25177
+
Pro
CGG
[ENA]
¡û
>W1710057790
BCBV01000038
Bacteroidota
Porphyromonas gingivalis [BCBV]
14047
13972
-
Pro
CGG
[ENA]
¡û
>W1710601329
FUXE01000020
Bacteroidota
Porphyromonas circumdentaria [FUXE]
22849
22922
+
Pro
CGG
[ENA]
¡û
>W1710602931
FUYQ01000012
Bacteroidota
Parabacteroides chartae [FUYQ]
100376
100301
-
Pro
CGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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