tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.251610 (119 seq.)
>W1710785200 LJHQ01000066 Alphaproteobacteria Bosea sp. AAP35 [LJHQ] 2220 2295 + Ala TGC [ENA] ¡û
>W1710785495 LJHX01000075 Alphaproteobacteria alpha proteobacterium AAP81b [LJHX] 3555 3630 + Ala TGC [ENA] ¡û
>W1710796663 LJSH01000003 Alphaproteobacteria Oceanicaulis sp. HLUCCA04 [LJSH] 426442 426517 + Ala TGC [ENA] ¡û
>W1710869465 LMJT01000005 Alphaproteobacteria Bosea sp. Root381 [LMJT] 282474 282399 - Ala TGC [ENA] ¡û
>W1711069429 LSFP01000022 Alphaproteobacteria Zymomonas mobilis [LSFP] 3190 3115 - Ala TGC [ENA] ¡û
>W1711072969 LSIB01000190 Alphaproteobacteria Rhizobiales bacterium CCH3-A5 [LSIB] 41677 41602 - Ala TGC [ENA] ¡û
>C171049956 CP016464 Alphaproteobacteria Bosea sp. RAC05 [CP016464] 1346279 1346354 + Ala TGC - ¡û
>C171049996 CP016464 Alphaproteobacteria Bosea sp. RAC05 [CP016464] 243986 243911 - Ala TGC - ¡û
>C171075883 CP018221 Alphaproteobacteria Tardibacter chloracetimidivorans JJ-A5 [CP018221] 3229450 3229525 + Ala TGC - ¡û
>C171075898 CP018221 Alphaproteobacteria Tardibacter chloracetimidivorans JJ-A5 [CP018221] 604902 604827 - Ala TGC - ¡û
>C171115137 CP021053 Alphaproteobacteria Zymomonas mobilis subsp. mobilis NRRL B-1960 [CP021053] 1399290 1399365 + Ala TGC - ¡û
>C171115140 CP021053 Alphaproteobacteria Zymomonas mobilis subsp. mobilis NRRL B-1960 [CP021053] 1416135 1416210 + Ala TGC - ¡û
>C171115146 CP021053 Alphaproteobacteria Zymomonas mobilis subsp. mobilis NRRL B-1960 [CP021053] 1698695 1698770 + Ala TGC - ¡û
>W131046835 AMSR01000039 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ATCC 31822 [AMSR] 2168 2243 + Ala TGC [ENA] ¡û
>W131058808 ANFY01000003 Alphaproteobacteria Sandarakinorhabdus sp. AAP62 [ANFY] 291481 291556 + Ala TGC [ENA] ¡û
>W131160242 AQWK01000037 Alphaproteobacteria Novosphingobium nitrogenifigens DSM 19370 [AQWK] 2023 2098 + Ala TGC [ENA] ¡û
>W131216109 ATVO01000004 Alphaproteobacteria Sandarakinorhabdus limnophila DSM 17366 [ATVO] 90997 90922 - Ala TGC [ENA] ¡û
>W131237269 AUNU01000041 Alphaproteobacteria Sphingomonas sp. JGI 0001002-N14 [AUNU] 2277 2352 + Ala TGC [ENA] ¡û
>W131237393 AUOJ01000135 Alphaproteobacteria Bradyrhizobium sp. JGI 0001002-A22 [AUOJ] 959 1034 + Ala TGC [ENA] ¡û
>C027937 AE008692 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 [AE008692] 1915322 1915247 - Ala TGC [Ensembl] ¡û
>C027940 AE008692 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 [AE008692] 1901472 1901397 - Ala TGC [Ensembl] ¡û
>C027946 AE008692 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 [AE008692] 1616300 1616225 - Ala TGC [Ensembl] ¡û
>WENV180282442 OBIC01000004 [OBIC] beach sand metagenome; beach sand 148037 148112 + Ala TGC [ENA] ¢þ
>WENV180285661 OBID01605057 [OBID] metagenome; sludge 236 161 - Ala TGC [ENA] ¢þ
>WENV180293881 OBIY01003394 [OBIY] beach sand metagenome; beach sand 400 475 + Ala TGC [ENA] ¢þ
>WENV180309498 OBJS01002792 [OBJS] beach sand metagenome; beach sand 420 495 + Ala TGC [ENA] ¢þ
>WENV180690891 OCZS010033784 [OCZS] soil metagenome; soil 1007 932 - Ala TGC [ENA] ¢þ
>WENV181155227 OEID01036138 [OEID] soil metagenome; soil 126 51 - Ala TGC [ENA] ¢þ
>WENV181192304 OEPS010557696 [OEPS] soil metagenome; soil 90 165 + Ala TGC [ENA] ¢þ
>WENV181233615 OFET01000016 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 350110 350035 - Ala TGC [ENA] ¢þ
>WENV181234511 OFEU01000237 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 51065 50990 - Ala TGC [ENA] ¢þ
>WENV181308467 OFIS01027275 [OFIS] sludge metagenome; sludge 237 162 - Ala TGC [ENA] ¢þ
>WENV181838138 OGVM01011843 [OGVM] freshwater metagenome; freshwater 633 558 - Ala TGC [ENA] ¢þ
>WENV181843314 OGVU01008298 [OGVU] freshwater metagenome; freshwater 194 119 - Ala TGC [ENA] ¢þ
>WENV181851985 OGWF01002965 [OGWF] freshwater metagenome; freshwater 1484 1409 - Ala TGC [ENA] ¢þ
>WENV183678949 ORJL011942992 [ORJL] groundwater metagenome; groundwater 142 67 - Ala TGC [ENA] ¢þ
>WENV183733587 PJTY01005428 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 637 712 + Ala TGC [ENA] ¢þ
>WENV170012366 APMI01162179 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 214 287 + Ala TGC [ENA] ¢þ
>WENV170018595 BBPD01000103 [BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 3697 3622 - Ala TGC [ENA] ¢þ
>WENV170019719 BBPE01000220 [BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 21732 21807 + Ala TGC [ENA] ¢þ
>WENV170622391 FUWD013101341 [FUWD] metagenome; unknown 759 684 - Ala TGC [ENA] ¢þ
>WENV170630615 FUWD013315758 [FUWD] metagenome; unknown 759 684 - Ala TGC [ENA] ¢þ
>WENV170645682 JPYU01002623 [JPYU] wastewater metagenome; domestic wastewater sediment without any treatment 80 155 + Ala TGC [ENA] ¢þ
>WENV170680704 LFEF01012466 [LFEF] freshwater metagenome; waterbloom 1681 1606 - Ala TGC [ENA] ¢þ
>WENV170714157 LNFM01057945 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 3260 3185 - Ala TGC [ENA] ¢þ
>WENV170980952 MWVT01010529 [MWVT] soil metagenome; TG5-1 sample; Antarctic (ecotone) soil 1153 1228 + Ala TGC [ENA] ¢þ
>WENV170986250 MWVX01024316 [MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil 263 338 + Ala TGC [ENA] ¢þ
>WENV170988252 MWVX01427361 [MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil 32 107 + Ala TGC [ENA] ¢þ
>WENV170988257 MWVX01427867 [MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil 242 167 - Ala TGC [ENA] ¢þ
>WENV170988776 MWVY01004883 [MWVY] soil metagenome; MS7-5 sample; Antarctic (ecotone) soil 1060 1135 + Ala TGC [ENA] ¢þ
>WENV170988866 MWVY01019181 [MWVY] soil metagenome; MS7-5 sample; Antarctic (ecotone) soil 388 313 - Ala TGC [ENA] ¢þ
>WENV170992848 MWWB01108824 [MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil 183 258 + Ala TGC [ENA] ¢þ
>WENV170993585 MWWB01362169 [MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil 195 120 - Ala TGC [ENA] ¢þ
>WENV170994135 MWWD01017586 [MWWD] soil metagenome; MS2-2 sample; Antarctic (ecotone) soil 439 514 + Ala TGC [ENA] ¢þ
>WENV170995069 MWWE01141266 [MWWE] soil metagenome; MS1-1 sample; Antarctic (ecotone) soil 195 120 - Ala TGC [ENA] ¢þ
>WENV170995789 MWWF01060709 [MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil 291 366 + Ala TGC [ENA] ¢þ
>WENV170996277 MWWF01202133 [MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil 52 127 + Ala TGC [ENA] ¢þ
>WENV170997074 MWWG01027568 [MWWG] soil metagenome; MG6-4 sample; Antarctic (ecotone) soil 217 142 - Ala TGC [ENA] ¢þ
>WENV170997571 MWWG01190634 [MWWG] soil metagenome; MG6-4 sample; Antarctic (ecotone) soil 283 208 - Ala TGC [ENA] ¢þ
>WENV171003135 NNBT01001758 [NNBT] plant metagenome; symbiotic tissue sample KVJ10 27190 27115 - Ala TGC [ENA] ¢þ
>WENV171003942 NNBV01004745 [NNBV] plant metagenome; symbiotic tissue sample KVS11 1827 1902 + Ala TGC [ENA] ¢þ
>PL191001137 CP032828 Alphaproteobacteria Sphingomonas sp. YZ-8 plasmid:unnamed1 (CP032828) 17997 17922 - Ala TGC [ENA] ¡û
>C181088873 CP023677 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ZM4 [CP023677] 1931076 1931001 - Ala TGC - ¡û
>C181088876 CP023677 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ZM4 [CP023677] 1917224 1917149 - Ala TGC - ¡û
>C181088882 CP023677 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ZM4 [CP023677] 1632075 1632000 - Ala TGC - ¡û
>C181088924 CP023682 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ZM4 [CP023682] 1923660 1923585 - Ala TGC - ¡û
>C181088927 CP023682 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ZM4 [CP023682] 1909808 1909733 - Ala TGC - ¡û
>C181088933 CP023682 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ZM4 [CP023682] 1624659 1624584 - Ala TGC - ¡û
>C191015696 CP018911 Alphaproteobacteria Glycocaulis alkaliphilus 6B-8 [CP018911] 2272968 2272893 - Ala TGC - ¡û
>C191095125 CP032829 Alphaproteobacteria Sphingomonas paeninsulae YZ-8 [CP032829] 1624127 1624202 + Ala TGC - ¡û
>C191145649 CP035712 Alphaproteobacteria Zymomonas mobilis ZM4* [CP035712] 1915267 1915192 - Ala TGC - ¡û
>C191145652 CP035712 Alphaproteobacteria Zymomonas mobilis ZM4* [CP035712] 1901415 1901340 - Ala TGC - ¡û
>C191145658 CP035712 Alphaproteobacteria Zymomonas mobilis ZM4* [CP035712] 1616259 1616184 - Ala TGC - ¡û
>C191145700 CP035713 Alphaproteobacteria Zymomonas mobilis ER79ag [CP035713] 1915267 1915192 - Ala TGC - ¡û
>C191145703 CP035713 Alphaproteobacteria Zymomonas mobilis ER79ag [CP035713] 1901415 1901340 - Ala TGC - ¡û
>C191145709 CP035713 Alphaproteobacteria Zymomonas mobilis ER79ag [CP035713] 1616259 1616184 - Ala TGC - ¡û
>C191171224 CP039704 Alphaproteobacteria Hankyongella ginsenosidimutans W1-2-3 [CP039704] 1718617 1718692 + Ala TGC - ¡û
>W141779101 JONN01000001 Alphaproteobacteria Sphingomonas astaxanthinifaciens DSM 22298 [JONN] 1921249 1921324 + Ala TGC [ENA] ¡û
>W141820602 JQMZ01000001 Alphaproteobacteria Oceanicaulis sp. HL-87 [JQMZ] 2348656 2348581 - Ala TGC [ENA] ¡û
>W1910182435 BJMW01000034 Alphaproteobacteria Zymomonas mobilis subsp. mobilis NBRC 13756 [BJMW] 3550 3475 - Ala TGC [ENA] ¡û
>W1910182480 BJMX01000026 Alphaproteobacteria Zymomonas mobilis subsp. pomaceae NBRC 13757 [BJMX] 3678 3603 - Ala TGC [ENA] ¡û
>C141008798 CP006818 Alphaproteobacteria Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 [CP006818] 1485110 1485185 + Ala TGC [Ensembl] ¡û
>C141008804 CP006818 Alphaproteobacteria Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 [CP006818] 1769301 1769376 + Ala TGC [Ensembl] ¡û
>W1910822165 MWMO01000013 Alphaproteobacteria Novosphingobium sp. PC22D [MWMO] 54495 54570 + Ala TGC [ENA] ¡û
>W1911139281 NOXT01000120 Alphaproteobacteria Sandarakinorhabdus cyanobacteriorum TH057 [NOXT] 38136 38061 - Ala TGC [ENA] ¡û
>W1911765789 QXDC01000003 Alphaproteobacteria Hephaestia caeni DSM 25527 [QXDC] 1218919 1218994 + Ala TGC [ENA] ¡û
>W1810109405 PHHF01000058 Alphaproteobacteria Sphingomonas fennica K101 [PHHF] 95475 95400 - Ala TGC [ENA] ¡û
>SRA1003316 SRR002326.387113 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 79 154 + Ala TGC [SRA]
>SRA1004282 SRR002328.245309 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 135 210 + Ala TGC [SRA]
>W1810445016 PZKF01000079 Alphaproteobacteria Phaeovulum veldkampii DSM 11550 [PZKF] 3419 3344 - Ala TGC [ENA] ¡û
>W1810463350 PZZM01000001 Alphaproteobacteria Bosea sp. 124 [PZZM] 2120788 2120863 + Ala TGC [ENA] ¡û
>W1810463386 PZZM01000001 Alphaproteobacteria Bosea sp. 124 [PZZM] 810431 810356 - Ala TGC [ENA] ¡û
>C151004597 CP003709 Alphaproteobacteria Zymomonas mobilis subsp. mobilis NRRL B-12526 [CP003709] 1484197 1484272 + Ala TGC [Ensembl] ¡û
>C151004600 CP003709 Alphaproteobacteria Zymomonas mobilis subsp. mobilis NRRL B-12526 [CP003709] 1498038 1498113 + Ala TGC [Ensembl] ¡û
>C151004606 CP003709 Alphaproteobacteria Zymomonas mobilis subsp. mobilis NRRL B-12526 [CP003709] 1782282 1782357 + Ala TGC [Ensembl] ¡û
>C11124221 CP002865 Alphaproteobacteria Zymomonas mobilis subsp. pomaceae ATCC 29192 [CP002865] 1469301 1469376 + Ala TGC [Ensembl] ¡û
>C11124224 CP002865 Alphaproteobacteria Zymomonas mobilis subsp. pomaceae ATCC 29192 [CP002865] 1491048 1491123 + Ala TGC [Ensembl] ¡û
>C11124230 CP002865 Alphaproteobacteria Zymomonas mobilis subsp. pomaceae ATCC 29192 [CP002865] 1778241 1778316 + Ala TGC [Ensembl] ¡û
>W11151089 AEWJ01000057 Alphaproteobacteria Novosphingobium nitrogenifigens DSM 19370 [AEWJ] 3429 3354 - Ala TGC [ENA] ¡û
>C121003144 CP002850 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ATCC 10988 [CP002850] 1500063 1500138 + Ala TGC [Ensembl] ¡û
>C121003150 CP002850 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ATCC 10988 [CP002850] 1786679 1786754 + Ala TGC [Ensembl] ¡û
>C121015255 CP003704 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ATCC 29191 [CP003704] 1461440 1461515 + Ala TGC [Ensembl] ¡û
>C121015258 CP003704 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ATCC 29191 [CP003704] 1475380 1475455 + Ala TGC [Ensembl] ¡û
>C121015264 CP003704 Alphaproteobacteria Zymomonas mobilis subsp. mobilis ATCC 29191 [CP003704] 1737564 1737639 + Ala TGC [Ensembl] ¡û
>C161070691 CP014301 Alphaproteobacteria Bosea sp. PAMC 26642 [CP014301] 3934226 3934151 - Ala TGC [Ensembl] ¡û
>W1610617196 LGSZ01000097 Alphaproteobacteria Bosea vaviloviae [LGSZ] 2226 2301 + Ala TGC [ENA] ¡û
>W1610649006 LJHQ01000066 Alphaproteobacteria Bosea sp. AAP35 [LJHQ] 2220 2295 + Ala TGC [ENA] ¡û
>W1610649301 LJHX01000075 Alphaproteobacteria alpha proteobacterium AAP81b [LJHX] 3555 3630 + Ala TGC [ENA] ¡û
>W1610660620 LJSH01000003 Alphaproteobacteria Oceanicaulis sp. HLUCCA04 [LJSH] 426442 426517 + Ala TGC [ENA] ¡û
>W1610731811 LMJT01000005 Alphaproteobacteria Bosea sp. Root381 [LMJT] 282474 282399 - Ala TGC [ENA] ¡û
>W1610909957 LSFP01000022 Alphaproteobacteria Zymomonas mobilis [LSFP] 3190 3115 - Ala TGC [ENA] ¡û
>W1610912229 LSIB01000190 Alphaproteobacteria Rhizobiales bacterium CCH3-A5 [LSIB] 41677 41602 - Ala TGC [ENA] ¡û
>W1611004962 LXQM01000003 Alphaproteobacteria Croceibacterium salegens XY-R17 [LXQM] 68085 68010 - Ala TGC [ENA] ¡û
>ENV001330 AY713454 Environmental sample from ENV division of INSDC 273 348 + Ala TGC [ENA]
>W1710538950 FNUY01000004 Alphaproteobacteria Bosea lathyri [FNUY] 529410 529335 - Ala TGC [ENA] ¡û
>W1710538974 FNUY01000017 Alphaproteobacteria Bosea lathyri [FNUY] 85160 85235 + Ala TGC [ENA] ¡û
>W1710538978 FNUY01000020 Alphaproteobacteria Bosea lathyri [FNUY] 3776 3701 - Ala TGC [ENA] ¡û
>W1710538981 FNUY01000023 Alphaproteobacteria Bosea lathyri [FNUY] 32400 32325 - Ala TGC [ENA] ¡û
>W1710742810 LGSZ01000097 Alphaproteobacteria Bosea vaviloviae [LGSZ] 2226 2301 + Ala TGC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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