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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.258868 (292 seq.)
>W1711294063
LZZC01000035
Bacillota
Clostridium beijerinckii [LZZC]
28855
28930
+
Val
TAC
[ENA]
¡û
>W1711294067
LZZC01000037
Bacillota
Clostridium beijerinckii [LZZC]
41744
41819
+
Val
TAC
[ENA]
¡û
>W1711294071
LZZC01000037
Bacillota
Clostridium beijerinckii [LZZC]
42107
42182
+
Val
TAC
[ENA]
¡û
>W1711294355
LZZJ01000003
Bacillota
Clostridium beijerinckii [LZZJ]
18702
18627
-
Val
TAC
[ENA]
¡û
>W1711462102
MJHM01000002
Bacillota
Clostridium baratii [MJHM]
75747
75822
+
Val
TAC
[ENA]
¡û
>W1711462105
MJHM01000002
Bacillota
Clostridium baratii [MJHM]
76018
76093
+
Val
TAC
[ENA]
¡û
>W1711462135
MJHM01000007
Bacillota
Clostridium baratii [MJHM]
37722
37797
+
Val
TAC
[ENA]
¡û
>W1711462143
MJHM01000019
Bacillota
Clostridium baratii [MJHM]
47291
47216
-
Val
TAC
[ENA]
¡û
>W1711462147
MJHM01000019
Bacillota
Clostridium baratii [MJHM]
46906
46831
-
Val
TAC
[ENA]
¡û
>W1711732759
MTVX01000001
Bacillota
Clostridioides difficile [MTVX]
1168359
1168434
+
Val
TAC
[ENA]
¡û
>W1711733742
MTWI01000001
Bacillota
Clostridioides difficile [MTWI]
129412
129487
+
Val
TAC
[ENA]
¡û
>W1711791245
MWIW01000002
Bacillota
Clostridium botulinum [MWIW]
742018
741943
-
Val
TAC
[ENA]
¡û
>W1711791256
MWIW01000004
Bacillota
Clostridium botulinum [MWIW]
119106
119181
+
Val
TAC
[ENA]
¡û
>W1711791270
MWIW01000007
Bacillota
Clostridium botulinum [MWIW]
43522
43597
+
Val
TAC
[ENA]
¡û
>W1711791310
MWIW01000030
Bacillota
Clostridium botulinum [MWIW]
45
120
+
Val
TAC
[ENA]
¡û
>W1711791313
MWIW01000030
Bacillota
Clostridium botulinum [MWIW]
354
429
+
Val
TAC
[ENA]
¡û
>W1711791857
MWJE01000114
Bacillota
Clostridium botulinum [MWJE]
181
256
+
Val
TAC
[ENA]
¡û
>W1711791876
MWJE01000243
Bacillota
Clostridium botulinum [MWJE]
11048
10973
-
Val
TAC
[ENA]
¡û
>W1711957032
NBTS01000002
Bacillota
Clostridioides difficile [NBTS]
2980022
2980097
+
Val
TAC
[ENA]
¡û
>W1712096576
NHZR01000017
Bacillota
Clostridium diolis [NHZR]
20770
20695
-
Val
TAC
[ENA]
¡û
>W1712096579
NHZR01000017
Bacillota
Clostridium diolis [NHZR]
20486
20411
-
Val
TAC
[ENA]
¡û
>W1712096583
NHZR01000020
Bacillota
Clostridium diolis [NHZR]
35208
35133
-
Val
TAC
[ENA]
¡û
>W1712096587
NHZR01000020
Bacillota
Clostridium diolis [NHZR]
34845
34770
-
Val
TAC
[ENA]
¡û
>C171047289
CP016318
Bacillota
Clostridioides difficile 630 delta erm [CP016318]
134769
134844
+
Val
TAC
-
¡û
>C171100575
CP019870
Bacillota
Clostridioides difficile BR81 [CP019870]
3928446
3928371
-
Val
TAC
-
¡û
>C171107105
CP020424
Bacillota
Clostridioides difficile FDAARGOS_267 [CP020424]
2060167
2060092
-
Val
TAC
-
¡û
>C000791
CP000724
Bacillota
Alkaliphilus metalliredigens QYMF [CP000724]
1715308
1715383
+
Val
TAC
[Ensembl]
¡û
>WENV180121459
OASR01005817
[OASR] human gut metagenome; faeces
353
278
-
Val
TAC
[ENA]
¢þ
>WENV180129332
OATC01001037
[OATC] human gut metagenome; faeces
3800
3875
+
Val
TAC
[ENA]
¢þ
>WENV180129477
OATC01012433
[OATC] human gut metagenome; faeces
90
165
+
Val
TAC
[ENA]
¢þ
>WENV180178028
OAWF01014802
[OAWF] human gut metagenome; faeces
153
79
-
Val
TAC
[ENA]
¢þ
>WENV180411908
OBUZ01002983
[OBUZ] human gut metagenome; faeces
304
378
+
Val
TAC
[ENA]
¢þ
>WENV180458381
OBXV01023472
[OBXV] human gut metagenome; faeces
117
42
-
Val
TAC
[ENA]
¢þ
>WENV180497036
OCAE01000110
[OCAE] human gut metagenome; faeces
82316
82242
-
Val
TAC
[ENA]
¢þ
>W141100261
AVKE01000004
Bacillota
Clostridioides difficile DA00261 [AVKE]
1684
1759
+
Val
TAC
[ENA]
¡û
>W141101691
AVLV01000006
Bacillota
Clostridioides difficile P15 [AVLV]
189
264
+
Val
TAC
[ENA]
¡û
>W141101732
AVLW01000006
Bacillota
Clostridioides difficile P19 [AVLW]
761
836
+
Val
TAC
[ENA]
¡û
>W141101836
AVMA01000012
Bacillota
Clostridioides difficile P24 [AVMA]
775
850
+
Val
TAC
[ENA]
¡û
>W141102295
AVMN01000007
Bacillota
Clostridioides difficile P49 [AVMN]
2890
2965
+
Val
TAC
[ENA]
¡û
>WENV181805123
OGSH01000840
[OGSH] human gut metagenome; fecal sample 5 from infant 6
230
155
-
Val
TAC
[ENA]
¢þ
>WENV181811171
OGSY01000100
[OGSY] human gut metagenome; fecal sample 5 from infant 8
155
80
-
Val
TAC
[ENA]
¢þ
>WENV181811281
OGSY01000515
[OGSY] human gut metagenome; fecal sample 5 from infant 8
114
189
+
Val
TAC
[ENA]
¢þ
>WENV181821107
OGUD01029391
[OGUD] metagenome; Human gut stool
195
269
+
Val
TAC
[ENA]
¢þ
>W141212999
AZRQ01000002
Bacillota
Clostridium botulinum CDC54085 [AZRQ]
29833
29758
-
Val
TAC
[ENA]
¡û
>W141213015
AZRQ01000062
Bacillota
Clostridium botulinum CDC54085 [AZRQ]
6
81
+
Val
TAC
[ENA]
¡û
>W141213019
AZRQ01000062
Bacillota
Clostridium botulinum CDC54085 [AZRQ]
346
421
+
Val
TAC
[ENA]
¡û
>W141213022
AZRQ01000062
Bacillota
Clostridium botulinum CDC54085 [AZRQ]
655
730
+
Val
TAC
[ENA]
¡û
>W141213040
AZRQ01000123
Bacillota
Clostridium botulinum CDC54085 [AZRQ]
6120
6045
-
Val
TAC
[ENA]
¡û
>W141213054
AZRQ01000265
Bacillota
Clostridium botulinum CDC54085 [AZRQ]
1477
1552
+
Val
TAC
[ENA]
¡û
>C08002764
CP000728
Bacillota
Clostridium botulinum F str. Langeland [CP000728]
195250
195325
+
Val
TAC
[Ensembl]
¡û
>C08002773
CP000728
Bacillota
Clostridium botulinum F str. Langeland [CP000728]
3961537
3961465
-
Val
TAC
[Ensembl]
¡û
>C08002777
CP000728
Bacillota
Clostridium botulinum F str. Langeland [CP000728]
3961197
3961125
-
Val
TAC
[Ensembl]
¡û
>C08002820
CP000728
Bacillota
Clostridium botulinum F str. Langeland [CP000728]
3387495
3387423
-
Val
TAC
[Ensembl]
¡û
>W141231559
BAUF01000002
Bacillota
Clostridium botulinum B str. Osaka05 [BAUF]
3435
3360
-
Val
TAC
[ENA]
¡û
>W141231574
BAUF01000008
Bacillota
Clostridium botulinum B str. Osaka05 [BAUF]
35774
35849
+
Val
TAC
[ENA]
¡û
>W141231586
BAUF01000045
Bacillota
Clostridium botulinum B str. Osaka05 [BAUF]
18880
18805
-
Val
TAC
[ENA]
¡û
>WENV182410801
OIFM01000055
[OIFM] human gut metagenome; stool
266
191
-
Val
TAC
[ENA]
¢þ
>WENV182411790
OIFQ01000071
[OIFQ] human gut metagenome; stool
1
76
+
Val
TAC
[ENA]
¢þ
>WENV182411807
OIFQ01000094
[OIFQ] human gut metagenome; stool
36980
37055
+
Val
TAC
[ENA]
¢þ
>WENV182613660
OJKA01004672
[OJKA] metagenome; faeces
404
479
+
Val
TAC
[ENA]
¢þ
>WENV182614076
OJKB01000385
[OJKB] metagenome; faeces
155
80
-
Val
TAC
[ENA]
¢þ
>WENV182622354
OJKJ01026836
[OJKJ] metagenome; faeces
387
313
-
Val
TAC
[ENA]
¢þ
>WENV182669819
OJNK01001349
[OJNK] human gut metagenome; human gut
11936
11862
-
Val
TAC
[ENA]
¢þ
>WENV182815108
OJYO01002107
[OJYO] human gut metagenome; human gut
1946
1871
-
Val
TAC
[ENA]
¢þ
>W141427463
JENL01000002
Bacillota
Clostridium novyi A str. 4540 [JENL]
133062
132987
-
Val
TAC
[ENA]
¡û
>W141427467
JENL01000002
Bacillota
Clostridium novyi A str. 4540 [JENL]
132708
132633
-
Val
TAC
[ENA]
¡û
>W141427499
JENL01000014
Bacillota
Clostridium novyi A str. 4540 [JENL]
1731
1656
-
Val
TAC
[ENA]
¡û
>W141427522
JENL01000050
Bacillota
Clostridium novyi A str. 4540 [JENL]
10052
9977
-
Val
TAC
[ENA]
¡û
>WENV170563521
CZCB01020435
[CZCB] anaerobic digester metagenome; anaerobic digester
1646
1571
-
Val
TAC
[ENA]
¢þ
>WENV170675428
LCWZ01070465
[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
308
233
-
Val
TAC
[ENA]
¢þ
>W141460660
JFGC01000399
Bacillota
Clostridium botulinum [JFGC]
207
132
-
Val
TAC
[ENA]
¡û
>W141460663
JFGC01000497
Bacillota
Clostridium botulinum [JFGC]
773
698
-
Val
TAC
[ENA]
¡û
>W141460703
JFGC01001087
Bacillota
Clostridium botulinum [JFGC]
868
793
-
Val
TAC
[ENA]
¡û
>W141460707
JFGC01001087
Bacillota
Clostridium botulinum [JFGC]
528
453
-
Val
TAC
[ENA]
¡û
>W141460710
JFGC01001087
Bacillota
Clostridium botulinum [JFGC]
219
144
-
Val
TAC
[ENA]
¡û
>W09132858
ACOM01000004
Bacillota
Clostridium butyricum E4 str. BoNT E BL5262 [ACOM]
382589
382514
-
Val
TAC
[ENA]
¡û
>W09132861
ACOM01000004
Bacillota
Clostridium butyricum E4 str. BoNT E BL5262 [ACOM]
382320
382245
-
Val
TAC
[ENA]
¡û
>W09132892
ACOM01000011
Bacillota
Clostridium butyricum E4 str. BoNT E BL5262 [ACOM]
48268
48343
+
Val
TAC
[ENA]
¡û
>W09132896
ACOM01000011
Bacillota
Clostridium butyricum E4 str. BoNT E BL5262 [ACOM]
48662
48737
+
Val
TAC
[ENA]
¡û
>W09132900
ACOM01000011
Bacillota
Clostridium butyricum E4 str. BoNT E BL5262 [ACOM]
49057
49132
+
Val
TAC
[ENA]
¡û
>C181011351
CP011848
Bacillota
Clostridioides difficile DSM 27640 [CP011848]
138489
138564
+
Val
TAC
-
¡û
>C181013521
CP013841
Bacillota
Clostridium botulinum AM1051 [CP013841]
195748
195823
+
Val
TAC
-
¡û
>C181013530
CP013841
Bacillota
Clostridium botulinum AM1051 [CP013841]
3870755
3870680
-
Val
TAC
-
¡û
>C181013534
CP013841
Bacillota
Clostridium botulinum AM1051 [CP013841]
3870415
3870340
-
Val
TAC
-
¡û
>C181013537
CP013841
Bacillota
Clostridium botulinum AM1051 [CP013841]
3870106
3870031
-
Val
TAC
-
¡û
>C181111690
CP025044
Bacillota
Clostridioides difficile R0104a [CP025044]
27455
27530
+
Val
TAC
-
¡û
>C181111871
CP025046
Bacillota
Clostridioides difficile W0022a [CP025046]
44836
44911
+
Val
TAC
-
¡û
>C181135506
CP026593
Bacillota
Clostridioides difficile 12-00008 [CP026593]
138498
138573
+
Val
TAC
-
¡û
>C181135776
CP026596
Bacillota
Clostridioides difficile 10-00071 [CP026596]
138489
138564
+
Val
TAC
-
¡û
>C181136537
CP026613
Bacillota
Clostridioides difficile R1 [CP026613]
138284
138359
+
Val
TAC
-
¡û
>C181136627
CP026614
Bacillota
Clostridioides difficile R2 [CP026614]
138284
138359
+
Val
TAC
-
¡û
>C181136724
CP026615
Bacillota
Clostridioides difficile R3 [CP026615]
3956559
3956484
-
Val
TAC
-
¡û
>C191009350
CP012309
Bacillota
Clostridioides difficile DSM 28668 [CP012309]
134766
134841
+
Val
TAC
-
¡û
>C191010618
CP013686
Bacillota
Clostridium botulinum F1425 [CP013686]
631908
631983
+
Val
TAC
-
¡û
>C191010625
CP013686
Bacillota
Clostridium botulinum F1425 [CP013686]
3841168
3841093
-
Val
TAC
-
¡û
>C191010635
CP013686
Bacillota
Clostridium botulinum F1425 [CP013686]
398138
398063
-
Val
TAC
-
¡û
>C191010639
CP013686
Bacillota
Clostridium botulinum F1425 [CP013686]
397798
397723
-
Val
TAC
-
¡û
>C191010642
CP013686
Bacillota
Clostridium botulinum F1425 [CP013686]
397489
397414
-
Val
TAC
-
¡û
>C191016579
CP019857
Bacillota
Clostridioides difficile DSM 29745 [CP019857]
134746
134821
+
Val
TAC
-
¡û
>C191016760
CP019860
Bacillota
Clostridioides difficile DSM 29632 [CP019860]
134670
134745
+
Val
TAC
-
¡û
>C191103557
CP033214
Bacillota
Clostridioides difficile 12038 [CP033214]
138004
138079
+
Val
TAC
-
¡û
>W141561161
JHYF01000003
Bacillota
Alkaliphilus transvaalensis ATCC 700919 [JHYF]
463
538
+
Val
TAC
[ENA]
¡û
>W1910156256
BINJ01000197
Bacillota
Clostridioides difficile FD015 [BINJ]
1658
1583
-
Val
TAC
[ENA]
¡û
>W1910156634
BINP01000097
Bacillota
Clostridioides difficile FD023 [BINP]
689
764
+
Val
TAC
[ENA]
¡û
>W1910157611
BIOD01000053
Bacillota
Clostridioides difficile FD037 [BIOD]
619
694
+
Val
TAC
[ENA]
¡û
>W1910157883
BIOH01000085
Bacillota
Clostridioides difficile FD042 [BIOH]
1546
1471
-
Val
TAC
[ENA]
¡û
>W1910158094
BIOK01000082
Bacillota
Clostridioides difficile FD045 [BIOK]
634
709
+
Val
TAC
[ENA]
¡û
>W1910158226
BIOM01000153
Bacillota
Clostridioides difficile FD047 [BIOM]
431
506
+
Val
TAC
[ENA]
¡û
>W1910158268
BION01000042
Bacillota
Clostridioides difficile FD048 [BION]
1486
1411
-
Val
TAC
[ENA]
¡û
>W1910159018
BIOY01000147
Bacillota
Clostridioides difficile FD059 [BIOY]
18
93
+
Val
TAC
[ENA]
¡û
>W1910159240
BIPB01000122
Bacillota
Clostridioides difficile FD062 [BIPB]
433
508
+
Val
TAC
[ENA]
¡û
>W1910159371
BIPD01000116
Bacillota
Clostridioides difficile FD064 [BIPD]
1683
1608
-
Val
TAC
[ENA]
¡û
>W1910159703
BIPI01000037
Bacillota
Clostridioides difficile FD069 [BIPI]
1755
1680
-
Val
TAC
[ENA]
¡û
>W1910160077
BIPN01000120
Bacillota
Clostridioides difficile FD075 [BIPN]
741
816
+
Val
TAC
[ENA]
¡û
>W1910160749
BIPX01000126
Bacillota
Clostridioides difficile FD087 [BIPX]
1704
1629
-
Val
TAC
[ENA]
¡û
>W1910162119
BIQR01000187
Bacillota
Clostridioides difficile FD109 [BIQR]
1549
1474
-
Val
TAC
[ENA]
¡û
>W1910162526
BIQX01000121
Bacillota
Clostridioides difficile FD115 [BIQX]
607
682
+
Val
TAC
[ENA]
¡û
>W1910164009
BIRS01000125
Bacillota
Clostridioides difficile FD136 [BIRS]
663
738
+
Val
TAC
[ENA]
¡û
>W1910164305
BIRW01000085
Bacillota
Clostridioides difficile FD140 [BIRW]
433
508
+
Val
TAC
[ENA]
¡û
>W1910164370
BIRX01000114
Bacillota
Clostridioides difficile FD141 [BIRX]
1653
1578
-
Val
TAC
[ENA]
¡û
>W1910164922
BISF01000066
Bacillota
Clostridioides difficile FD149 [BISF]
387
462
+
Val
TAC
[ENA]
¡û
>W1910166081
BISV01000060
Bacillota
Clostridioides difficile FD175 [BISV]
1617
1542
-
Val
TAC
[ENA]
¡û
>W1910166710
BITE01000062
Bacillota
Clostridioides difficile FD184 [BITE]
104
179
+
Val
TAC
[ENA]
¡û
>W1910166731
BITE01000121
Bacillota
Clostridioides difficile FD184 [BITE]
104
179
+
Val
TAC
[ENA]
¡û
>W1910167505
BITP01000186
Bacillota
Clostridioides difficile FD195 [BITP]
583
658
+
Val
TAC
[ENA]
¡û
>W1910167582
BITQ01000267
Bacillota
Clostridioides difficile FD196 [BITQ]
537
612
+
Val
TAC
[ENA]
¡û
>W1910167769
BITT01000215
Bacillota
Clostridioides difficile FD199 [BITT]
1545
1470
-
Val
TAC
[ENA]
¡û
>W1910168048
BITX01000162
Bacillota
Clostridioides difficile FD203 [BITX]
760
835
+
Val
TAC
[ENA]
¡û
>W1910171152
BIVQ01000145
Bacillota
Clostridioides difficile FD252 [BIVQ]
1649
1574
-
Val
TAC
[ENA]
¡û
>W1910171303
BIVS01000139
Bacillota
Clostridioides difficile FD254 [BIVS]
437
512
+
Val
TAC
[ENA]
¡û
>W1910171656
BIVX01000227
Bacillota
Clostridioides difficile FD259 [BIVX]
758
833
+
Val
TAC
[ENA]
¡û
>W1910172212
BIWG01000381
Bacillota
Clostridioides difficile FD268 [BIWG]
713
788
+
Val
TAC
[ENA]
¡û
>W1910172474
BIWK01000316
Bacillota
Clostridioides difficile FD272 [BIWK]
634
709
+
Val
TAC
[ENA]
¡û
>W1910173312
BIWX01000345
Bacillota
Clostridioides difficile FD285 [BIWX]
713
788
+
Val
TAC
[ENA]
¡û
>W1910173704
BIXD01000185
Bacillota
Clostridioides difficile FD291 [BIXD]
1545
1470
-
Val
TAC
[ENA]
¡û
>W1910173905
BIXG01000322
Bacillota
Clostridioides difficile FD295 [BIXG]
1545
1470
-
Val
TAC
[ENA]
¡û
>W1910174042
BIXI01000187
Bacillota
Clostridioides difficile FD297 [BIXI]
643
718
+
Val
TAC
[ENA]
¡û
>W1910214521
FMKU01000030
Bacillota
Clostridioides difficile [FMKU]
509
584
+
Val
TAC
[ENA]
¡û
>W1910214828
FMKY01000024
Bacillota
Clostridioides difficile [FMKY]
1621
1546
-
Val
TAC
[ENA]
¡û
>W1910214937
FMLA01000001
Bacillota
Clostridioides difficile [FMLA]
508
583
+
Val
TAC
[ENA]
¡û
>W1910216441
FMLV01000021
Bacillota
Clostridioides difficile [FMLV]
1622
1547
-
Val
TAC
[ENA]
¡û
>W1910217500
FMMK01000029
Bacillota
Clostridioides difficile [FMMK]
1620
1545
-
Val
TAC
[ENA]
¡û
>W1910379000
FULK01000013
Bacillota
Clostridioides difficile VRECD0133 [FULK]
520
595
+
Val
TAC
[ENA]
¡û
>W1910379316
FULO01000011
Bacillota
Clostridioides difficile VRECD0173 [FULO]
517
592
+
Val
TAC
[ENA]
¡û
>W1910380337
FULZ01000014
Bacillota
Clostridioides difficile VRECD0131 [FULZ]
463
538
+
Val
TAC
[ENA]
¡û
>W1910381133
FUMI01000012
Bacillota
Clostridioides difficile VRECD0178 [FUMI]
3052
3127
+
Val
TAC
[ENA]
¡û
>W1910383708
FUNM01000010
Bacillota
Clostridioides difficile VRECD0001 [FUNM]
517
592
+
Val
TAC
[ENA]
¡û
>W1910384052
FUNQ01000011
Bacillota
Clostridioides difficile VRECD0007 [FUNQ]
538
613
+
Val
TAC
[ENA]
¡û
>W1910385033
FUOB01000010
Bacillota
Clostridioides difficile VRECD0048 [FUOB]
1472
1547
+
Val
TAC
[ENA]
¡û
>W1910385398
FUOF01000010
Bacillota
Clostridioides difficile VRECD0055 [FUOF]
94225
94150
-
Val
TAC
[ENA]
¡û
>W1910385521
FUOG01000025
Bacillota
Clostridioides difficile VRECD0074 [FUOG]
462
537
+
Val
TAC
[ENA]
¡û
>W1910385967
FUOL01000032
Bacillota
Clostridioides difficile VRECD0077 [FUOL]
820
745
-
Val
TAC
[ENA]
¡û
>W1910387301
FUPB01000012
Bacillota
Clostridioides difficile VRECD0114 [FUPB]
77864
77789
-
Val
TAC
[ENA]
¡û
>W1910387823
FUPH01000024
Bacillota
Clostridioides difficile VRECD0145 [FUPH]
562
637
+
Val
TAC
[ENA]
¡û
>W1910387984
FUPJ01000029
Bacillota
Clostridioides difficile VRECD0146 [FUPJ]
517
592
+
Val
TAC
[ENA]
¡û
>W1910388876
FUPU01000012
Bacillota
Clostridioides difficile VRECD0063 [FUPU]
70720
70645
-
Val
TAC
[ENA]
¡û
>W1910389174
FUPX01000018
Bacillota
Clostridioides difficile VRECD0095 [FUPX]
567
642
+
Val
TAC
[ENA]
¡û
>W1910390013
FUQH01000013
Bacillota
Clostridioides difficile VRECD0184 [FUQH]
54243
54168
-
Val
TAC
[ENA]
¡û
>W1910392329
FURI01000015
Bacillota
Clostridioides difficile VRECD0037 [FURI]
1665
1590
-
Val
TAC
[ENA]
¡û
>W1910392451
FURK01000012
Bacillota
Clostridioides difficile VRECD0058 [FURK]
571
646
+
Val
TAC
[ENA]
¡û
>W1910394353
FUSF01000022
Bacillota
Clostridioides difficile VRECD0109 [FUSF]
532
607
+
Val
TAC
[ENA]
¡û
>W1910394722
FUSK01000021
Bacillota
Clostridioides difficile CD63 [FUSK]
497
572
+
Val
TAC
[ENA]
¡û
>W1910395071
FUSP01000023
Bacillota
Clostridioides difficile CD69 [FUSP]
508
583
+
Val
TAC
[ENA]
¡û
>W1910395769
FUSZ01000045
Bacillota
Clostridioides difficile CD67 [FUSZ]
774
699
-
Val
TAC
[ENA]
¡û
>W1910396828
FUTO01000036
Bacillota
Clostridioides difficile CD52 [FUTO]
501
576
+
Val
TAC
[ENA]
¡û
>W1910397092
FUTS01000038
Bacillota
Clostridioides difficile CD10 [FUTS]
1700
1625
-
Val
TAC
[ENA]
¡û
>W1910397371
FUTW01000024
Bacillota
Clostridioides difficile CD58 [FUTW]
503
578
+
Val
TAC
[ENA]
¡û
>W1910397460
FUTX01000021
Bacillota
Clostridioides difficile CD09 [FUTX]
810
735
-
Val
TAC
[ENA]
¡û
>W1910397500
FUTY01000040
Bacillota
Clostridioides difficile CD20 [FUTY]
3799
3874
+
Val
TAC
[ENA]
¡û
>W1910398203
FUUI01000031
Bacillota
Clostridioides difficile CD59 [FUUI]
1622
1547
-
Val
TAC
[ENA]
¡û
>W1910618340
LJCK01000002
Bacillota
Clostridioides difficile LIBA5809 [LJCK]
1642
1567
-
Val
TAC
[ENA]
¡û
>W1910768870
MOPC01000043
Bacillota
Clostridioides difficile 5486-Y/ST2 [MOPC]
537
612
+
Val
TAC
[ENA]
¡û
>W1910769255
MOPG01000032
Bacillota
Clostridioides difficile 5490-CF/ST37 [MOPG]
540
615
+
Val
TAC
[ENA]
¡û
>W1910769668
MOPL01000073
Bacillota
Clostridioides difficile 5495-AF/ST41 [MOPL]
740
815
+
Val
TAC
[ENA]
¡û
>W1910770220
MOPR01000022
Bacillota
Clostridioides difficile 5504-L/ST55 [MOPR]
537
612
+
Val
TAC
[ENA]
¡û
>W1910770808
MOPX01000071
Bacillota
Clostridioides difficile 5542-Y/ST2 [MOPX]
537
612
+
Val
TAC
[ENA]
¡û
>W1910771038
MOPZ01000206
Bacillota
Clostridioides difficile 5547-DH/ST42 [MOPZ]
539
614
+
Val
TAC
[ENA]
¡û
>W1910771243
MOQB01000119
Bacillota
Clostridioides difficile 5549-NonSp/ST21 [MOQB]
861
936
+
Val
TAC
[ENA]
¡û
>W1910772020
MOQL01000144
Bacillota
Clostridioides difficile 5616-DH/ST42 [MOQL]
539
614
+
Val
TAC
[ENA]
¡û
>W1910772534
MOQR01000030
Bacillota
Clostridioides difficile 6589-DH/ST42 [MOQR]
539
614
+
Val
TAC
[ENA]
¡û
>W1910774213
MOTB01000059
Bacillota
Clostridioides difficile 6613-NonSp/ST3 [MOTB]
538
613
+
Val
TAC
[ENA]
¡û
>W1910775361
MOTN01000065
Bacillota
Clostridioides difficile 6629-NonSp/novelST [MOTN]
538
613
+
Val
TAC
[ENA]
¡û
>W1910775457
MOTO01000027
Bacillota
Clostridioides difficile 6630-DH/ST42 [MOTO]
539
614
+
Val
TAC
[ENA]
¡û
>W1910779637
MPFJ01000114
Bacillota
Clostridioides difficile 7477-A/ST43 [MPFJ]
739
814
+
Val
TAC
[ENA]
¡û
>W1910780809
MPFX01000203
Bacillota
Clostridioides difficile 7503-Y/ST2 [MPFX]
537
612
+
Val
TAC
[ENA]
¡û
>W1910781000
MPFZ01000565
Bacillota
Clostridioides difficile 6631-DH/ST42 [MPFZ]
539
614
+
Val
TAC
[ENA]
¡û
>W1910781742
MPGO01000220
Bacillota
Clostridioides difficile 7490-G/ST8 [MPGO]
539
614
+
Val
TAC
[ENA]
¡û
>C09103260
AP009049
Bacillota
Clostridium kluyveri NBRC 12016 [AP009049]
87929
88004
+
Val
TAC
[Ensembl]
¡û
>C09103263
AP009049
Bacillota
Clostridium kluyveri NBRC 12016 [AP009049]
88279
88354
+
Val
TAC
[Ensembl]
¡û
>W1911517096
OEZO01000090
Bacillota
Clostridioides difficile CD08-070 [OEZO]
529
454
-
Val
TAC
[ENA]
¡û
>W1911695143
QMBF01000010
Bacillota
Clostridium tetani 329 [QMBF]
91432
91357
-
Val
TAC
[ENA]
¡û
>W1911695146
QMBF01000010
Bacillota
Clostridium tetani 329 [QMBF]
91155
91080
-
Val
TAC
[ENA]
¡û
>W1810000008
BDQY01000008
Bacillota
Tepidibacter mesophilus JCM 16806 [BDQY]
65363
65288
-
Val
TAC
[ENA]
¡û
>W1810000034
BDQY01000045
Bacillota
Tepidibacter mesophilus JCM 16806 [BDQY]
5068
4993
-
Val
TAC
[ENA]
¡û
>W1810000069
BDQY01000096
Bacillota
Tepidibacter mesophilus JCM 16806 [BDQY]
167
92
-
Val
TAC
[ENA]
¡û
>W1810147496
PIQP01000026
Bacillota
Clostridium beijerinckii WB [PIQP]
57140
57065
-
Val
TAC
[ENA]
¡û
>W1810394118
PYBM01000014
Bacillota
Clostridium botulinum food_20 [PYBM]
42500
42575
+
Val
TAC
[ENA]
¡û
>W1810394127
PYBM01000120
Bacillota
Clostridium botulinum food_20 [PYBM]
16265
16190
-
Val
TAC
[ENA]
¡û
>W1810394152
PYBM01000141
Bacillota
Clostridium botulinum food_20 [PYBM]
15481
15406
-
Val
TAC
[ENA]
¡û
>W1810394156
PYBM01000141
Bacillota
Clostridium botulinum food_20 [PYBM]
15141
15066
-
Val
TAC
[ENA]
¡û
>W1810394159
PYBM01000141
Bacillota
Clostridium botulinum food_20 [PYBM]
14832
14757
-
Val
TAC
[ENA]
¡û
>W1810700905
QMDO01000001
Bacillota
Vallitalea guaymasensis L81 [QMDO]
2530646
2530719
+
Val
TAC
[ENA]
¡û
>W1810700935
QMDO01000001
Bacillota
Vallitalea guaymasensis L81 [QMDO]
3510561
3510633
+
Val
TAC
[ENA]
¡û
>W1810700956
QMDO01000001
Bacillota
Vallitalea guaymasensis L81 [QMDO]
35464
35392
-
Val
TAC
[ENA]
¡û
>W1810786687
QRCT01000011
Bacillota
Anaerosacchariphilus polymeriproducens MCWD5 [QRCT]
14084
14010
-
Val
TAC
[ENA]
¡û
>W1810786709
QRCT01000018
Bacillota
Anaerosacchariphilus polymeriproducens MCWD5 [QRCT]
25516
25444
-
Val
TAC
[ENA]
¡û
>W1810786731
QRCT01000049
Bacillota
Anaerosacchariphilus polymeriproducens MCWD5 [QRCT]
286231
286159
-
Val
TAC
[ENA]
¡û
>W1510020767
BBYD01000143
Bacillota
Clostridioides difficile KY65 [BBYD]
140
65
-
Val
TAC
[ENA]
¡û
>C10103060
FN538970
Bacillota
Clostridioides difficile CD196 [FN538970]
133099
133174
+
Val
TAC
[Ensembl]
¡û
>C11106349
FP565809
Bacillota
Acetoanaerobium sticklandii DSM 519 [FP565809]
567840
567915
+
Val
TAC
[Ensembl]
¡û
>C11106369
FP565809
Bacillota
Acetoanaerobium sticklandii DSM 519 [FP565809]
574804
574879
+
Val
TAC
[Ensembl]
¡û
>C11106380
FP565809
Bacillota
Acetoanaerobium sticklandii DSM 519 [FP565809]
2691203
2691128
-
Val
TAC
[Ensembl]
¡û
>C11106387
FP565809
Bacillota
Acetoanaerobium sticklandii DSM 519 [FP565809]
2510183
2510108
-
Val
TAC
[Ensembl]
¡û
>W1510882190
JDRY01000033
Bacillota
Clostridium botulinum C/D str. DC5 [JDRY]
69241
69316
+
Val
TAC
[ENA]
¡û
>W1510882199
JDRY01000034
Bacillota
Clostridium botulinum C/D str. DC5 [JDRY]
22034
21959
-
Val
TAC
[ENA]
¡û
>W1510882205
JDRY01000042
Bacillota
Clostridium botulinum C/D str. DC5 [JDRY]
16396
16471
+
Val
TAC
[ENA]
¡û
>W1510882209
JDRY01000042
Bacillota
Clostridium botulinum C/D str. DC5 [JDRY]
16748
16823
+
Val
TAC
[ENA]
¡û
>W1510882237
JDRZ01000003
Bacillota
Clostridium botulinum D str. CCUG 7971 [JDRZ]
46011
46086
+
Val
TAC
[ENA]
¡û
>W1510882241
JDRZ01000003
Bacillota
Clostridium botulinum D str. CCUG 7971 [JDRZ]
46363
46438
+
Val
TAC
[ENA]
¡û
>W1510882281
JDRZ01000077
Bacillota
Clostridium botulinum D str. CCUG 7971 [JDRZ]
30335
30410
+
Val
TAC
[ENA]
¡û
>W1510882290
JDRZ01000093
Bacillota
Clostridium botulinum D str. CCUG 7971 [JDRZ]
11472
11397
-
Val
TAC
[ENA]
¡û
>W1510882327
JDSA01000038
Bacillota
Clostridium haemolyticum NCTC 8350 [JDSA]
505
580
+
Val
TAC
[ENA]
¡û
>W1510882331
JDSA01000038
Bacillota
Clostridium haemolyticum NCTC 8350 [JDSA]
857
932
+
Val
TAC
[ENA]
¡û
>W1510882334
JDSA01000044
Bacillota
Clostridium haemolyticum NCTC 8350 [JDSA]
2348
2423
+
Val
TAC
[ENA]
¡û
>W1510882346
JDSA01000078
Bacillota
Clostridium haemolyticum NCTC 8350 [JDSA]
33693
33618
-
Val
TAC
[ENA]
¡û
>W1511501257
JXBR01000040
Bacillota
Clostridioides difficile LIBA-5734 [JXBR]
1393
1318
-
Val
TAC
[ENA]
¡û
>W1511501362
JXBT01000001
Bacillota
Clostridium butyricum HM-68 [JXBT]
3812228
3812303
+
Val
TAC
[ENA]
¡û
>W1511501366
JXBT01000001
Bacillota
Clostridium butyricum HM-68 [JXBT]
3812623
3812698
+
Val
TAC
[ENA]
¡û
>W1511501418
JXBT01000001
Bacillota
Clostridium butyricum HM-68 [JXBT]
3282265
3282190
-
Val
TAC
[ENA]
¡û
>W1511506866
JXMY01000004
Bacillota
Clostridium botulinum 277-00 [JXMY]
187252
187177
-
Val
TAC
[ENA]
¡û
>W1511506881
JXMY01000011
Bacillota
Clostridium botulinum 277-00 [JXMY]
17188
17113
-
Val
TAC
[ENA]
¡û
>W1511506893
JXMY01000020
Bacillota
Clostridium botulinum 277-00 [JXMY]
92876
92801
-
Val
TAC
[ENA]
¡û
>W1511506897
JXMY01000020
Bacillota
Clostridium botulinum 277-00 [JXMY]
92536
92461
-
Val
TAC
[ENA]
¡û
>W1511544337
JZJN01000084
Bacillota
Clostridium sporogenes 11579 [JZJN]
2
77
+
Val
TAC
[ENA]
¡û
>W1511544354
JZJN01000208
Bacillota
Clostridium sporogenes 11579 [JZJN]
99
174
+
Val
TAC
[ENA]
¡û
>W1511544368
JZJN01000262
Bacillota
Clostridium sporogenes 11579 [JZJN]
342
417
+
Val
TAC
[ENA]
¡û
>W11146079
AESA01000008
Bacillota
Clostridium botulinum C str. Stockholm [AESA]
5207
5282
+
Val
TAC
[ENA]
¡û
>W11146098
AESA01000051
Bacillota
Clostridium botulinum C str. Stockholm [AESA]
6734
6809
+
Val
TAC
[ENA]
¡û
>W11146120
AESA01000562
Bacillota
Clostridium botulinum C str. Stockholm [AESA]
9
84
+
Val
TAC
[ENA]
¡û
>W1511595678
LBNB01000043
Bacillota
Clostridium tetani ATCC 454 [LBNB]
41895
41820
-
Val
TAC
[ENA]
¡û
>W1511699281
LGIK01000030
Bacillota
Clostridium botulinum ATCC 17862 [LGIK]
43460
43535
+
Val
TAC
[ENA]
¡û
>W1511699285
LGIK01000030
Bacillota
Clostridium botulinum ATCC 17862 [LGIK]
43800
43875
+
Val
TAC
[ENA]
¡û
>W1511699288
LGIK01000030
Bacillota
Clostridium botulinum ATCC 17862 [LGIK]
44109
44184
+
Val
TAC
[ENA]
¡û
>W1511699310
LGIK01000044
Bacillota
Clostridium botulinum ATCC 17862 [LGIK]
33627
33552
-
Val
TAC
[ENA]
¡û
>W1511699325
LGIK01000054
Bacillota
Clostridium botulinum ATCC 17862 [LGIK]
119160
119235
+
Val
TAC
[ENA]
¡û
>W121102376
AKWA01000083
Bacillota
Clostridium beijerinckii G117 [AKWA]
101
26
-
Val
TAC
[ENA]
¡û
>W1610132598
FAAR01000175
Bacillota
Clostridioides difficile [FAAR]
8054
7979
-
Val
TAC
[ENA]
¡û
>W1610132761
FAAS01000183
Bacillota
Clostridioides difficile [FAAS]
84
159
+
Val
TAC
[ENA]
¡û
>W1610132998
FAAV01000451
Bacillota
Clostridioides difficile [FAAV]
61
136
+
Val
TAC
[ENA]
¡û
>W1610133022
FAAV01000509
Bacillota
Clostridioides difficile [FAAV]
61
136
+
Val
TAC
[ENA]
¡û
>W1610133037
FAAV01000530
Bacillota
Clostridioides difficile [FAAV]
1157
1082
-
Val
TAC
[ENA]
¡û
>W1610133050
FAAV01000547
Bacillota
Clostridioides difficile [FAAV]
1064
989
-
Val
TAC
[ENA]
¡û
>W1610145830
FAGS01000235
Bacillota
Clostridioides difficile [FAGS]
83
158
+
Val
TAC
[ENA]
¡û
>W1610149878
FAIP01000138
Bacillota
Clostridioides difficile [FAIP]
466
541
+
Val
TAC
[ENA]
¡û
>W1610151914
FAJM01000207
Bacillota
Clostridioides difficile [FAJM]
466
541
+
Val
TAC
[ENA]
¡û
>W1610154913
FAKV01000140
Bacillota
Clostridioides difficile [FAKV]
608
533
-
Val
TAC
[ENA]
¡û
>W1610603766
LFQB01000006
Bacillota
Clostridium botulinum [LFQB]
38707
38632
-
Val
TAC
[ENA]
¡û
>W1610603771
LFQB01000012
Bacillota
Clostridium botulinum [LFQB]
96722
96647
-
Val
TAC
[ENA]
¡û
>W1610603781
LFQB01000014
Bacillota
Clostridium botulinum [LFQB]
48105
48180
+
Val
TAC
[ENA]
¡û
>W1610603808
LFQB01000021
Bacillota
Clostridium botulinum [LFQB]
43088
43163
+
Val
TAC
[ENA]
¡û
>W1610603812
LFQB01000021
Bacillota
Clostridium botulinum [LFQB]
43428
43500
+
Val
TAC
[ENA]
¡û
>W1610604204
LFQV01000009
Bacillota
Clostridium botulinum [LFQV]
44444
44519
+
Val
TAC
[ENA]
¡û
>W1610604216
LFQV01000020
Bacillota
Clostridium botulinum [LFQV]
53179
53254
+
Val
TAC
[ENA]
¡û
>WENV086502
BABF01012285
Gut microbiome of Human (healthy human sample In-M, Infant, Female)
314
391
+
Val
TAC
[ENA]
>W1710134265
FAAR01000175
Bacillota
Clostridioides difficile [FAAR]
8054
7979
-
Val
TAC
[ENA]
¡û
>W1710134428
FAAS01000183
Bacillota
Clostridioides difficile [FAAS]
84
159
+
Val
TAC
[ENA]
¡û
>W1710134665
FAAV01000451
Bacillota
Clostridioides difficile [FAAV]
61
136
+
Val
TAC
[ENA]
¡û
>W1710134689
FAAV01000509
Bacillota
Clostridioides difficile [FAAV]
61
136
+
Val
TAC
[ENA]
¡û
>W1710134704
FAAV01000530
Bacillota
Clostridioides difficile [FAAV]
1157
1082
-
Val
TAC
[ENA]
¡û
>W1710134717
FAAV01000547
Bacillota
Clostridioides difficile [FAAV]
1064
989
-
Val
TAC
[ENA]
¡û
>W1710147497
FAGS01000235
Bacillota
Clostridioides difficile [FAGS]
83
158
+
Val
TAC
[ENA]
¡û
>W1710151545
FAIP01000138
Bacillota
Clostridioides difficile [FAIP]
466
541
+
Val
TAC
[ENA]
¡û
>W1710153581
FAJM01000207
Bacillota
Clostridioides difficile [FAJM]
466
541
+
Val
TAC
[ENA]
¡û
>W1710156580
FAKV01000140
Bacillota
Clostridioides difficile [FAKV]
608
533
-
Val
TAC
[ENA]
¡û
>W1710531815
FNPV01000002
Bacillota
Tindallia californiensis [FNPV]
428604
428529
-
Val
TAC
[ENA]
¡û
>W1710531830
FNPV01000005
Bacillota
Tindallia californiensis [FNPV]
2
77
+
Val
TAC
[ENA]
¡û
>W1710586570
FQXH01000010
Bacillota
Tepidibacter thalassicus DSM 15285 [FQXH]
60
135
+
Val
TAC
[ENA]
¡û
>W1710586582
FQXH01000015
Bacillota
Tepidibacter thalassicus DSM 15285 [FQXH]
56957
57032
+
Val
TAC
[ENA]
¡û
>W1710586591
FQXH01000038
Bacillota
Tepidibacter thalassicus DSM 15285 [FQXH]
13627
13552
-
Val
TAC
[ENA]
¡û
>W1710589452
FRAE01000023
Bacillota
Tepidibacter formicigenes DSM 15518 [FRAE]
35688
35613
-
Val
TAC
[ENA]
¡û
>W1710589463
FRAE01000084
Bacillota
Tepidibacter formicigenes DSM 15518 [FRAE]
258
183
-
Val
TAC
[ENA]
¡û
>W1710589468
FRAE01000106
Bacillota
Tepidibacter formicigenes DSM 15518 [FRAE]
201
276
+
Val
TAC
[ENA]
¡û
>W1710602777
FUYN01000006
Bacillota
Acetoanaerobium noterae [FUYN]
170182
170107
-
Val
TAC
[ENA]
¡û
>W1710602780
FUYN01000010
Bacillota
Acetoanaerobium noterae [FUYN]
41305
41230
-
Val
TAC
[ENA]
¡û
>W1710602795
FUYN01000011
Bacillota
Acetoanaerobium noterae [FUYN]
2
77
+
Val
TAC
[ENA]
¡û
>W1710725282
LFQB01000006
Bacillota
Clostridium botulinum [LFQB]
38707
38632
-
Val
TAC
[ENA]
¡û
>W1710725287
LFQB01000012
Bacillota
Clostridium botulinum [LFQB]
96722
96647
-
Val
TAC
[ENA]
¡û
>W1710725297
LFQB01000014
Bacillota
Clostridium botulinum [LFQB]
48105
48180
+
Val
TAC
[ENA]
¡û
>W1710725324
LFQB01000021
Bacillota
Clostridium botulinum [LFQB]
43088
43163
+
Val
TAC
[ENA]
¡û
>W1710725328
LFQB01000021
Bacillota
Clostridium botulinum [LFQB]
43428
43500
+
Val
TAC
[ENA]
¡û
>W1710725720
LFQV01000009
Bacillota
Clostridium botulinum [LFQV]
44444
44519
+
Val
TAC
[ENA]
¡û
>W1710725732
LFQV01000020
Bacillota
Clostridium botulinum [LFQV]
53179
53254
+
Val
TAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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