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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.258868 (4 seq.)
>W1911539114
OMPO01000001
Actinomycetota
Blastococcus sp. Marseille-P5729 [OMPO]
1164484
1164557
+
Phe
GAA
[ENA]
¡û
>W2011169389
OMPO01000001
Actinomycetota
Blastococcus sp. Marseille-P5729 [OMPO]
1164484
1164557
+
Phe
GAA
[ENA]
¡û
>W2011553460
SDWW01000016
Actinomycetota
Cellulomonas sp. HLT2-17 [SDWW]
43540
43615
+
Phe
GAA
[ENA]
¡û
>W1710526103
FNKA01000004
Actinomycetota
Quadrisphaera sp. DSM 44207 [FNKA]
111189
111264
+
Phe
GAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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