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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.260330 (199 seq.)
>W1710860667
LMDB01000012
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
604858
604783
-
Lys
TTT
[ENA]
¡û
>W1710860678
LMDB01000035
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
285149
285224
+
Lys
TTT
[ENA]
¡û
>W1710860679
LMDB01000035
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
285242
285317
+
Lys
TTT
[ENA]
¡û
>W1710860680
LMDB01000035
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
311632
311707
+
Lys
TTT
[ENA]
¡û
>W1710863124
LMEW01000012
Betaproteobacteria
Massilia sp. Root133 [LMEW]
200763
200688
-
Lys
TTT
[ENA]
¡û
>W1710863132
LMEW01000023
Betaproteobacteria
Massilia sp. Root133 [LMEW]
442516
442441
-
Lys
TTT
[ENA]
¡û
>W1710863133
LMEW01000023
Betaproteobacteria
Massilia sp. Root133 [LMEW]
435732
435657
-
Lys
TTT
[ENA]
¡û
>W1710863155
LMEW01000035
Betaproteobacteria
Massilia sp. Root133 [LMEW]
3274
3199
-
Lys
TTT
[ENA]
¡û
>W1710864584
LMFZ01000005
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
190328
190403
+
Lys
TTT
[ENA]
¡û
>W1710864597
LMFZ01000034
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
323985
324060
+
Lys
TTT
[ENA]
¡û
>W1710864598
LMFZ01000034
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
324078
324153
+
Lys
TTT
[ENA]
¡û
>W1710864599
LMFZ01000034
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
350335
350410
+
Lys
TTT
[ENA]
¡û
>W1710867219
LMIC01000006
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
43832
43907
+
Lys
TTT
[ENA]
¡û
>W1710867220
LMIC01000006
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
43925
44000
+
Lys
TTT
[ENA]
¡û
>W1710867221
LMIC01000006
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
70316
70391
+
Lys
TTT
[ENA]
¡û
>W1710867234
LMIC01000015
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
9716
9791
+
Lys
TTT
[ENA]
¡û
>W131219565
ATYR01000007
Betaproteobacteria
Massilia alkalitolerans DSM 17462 [ATYR]
163372
163297
-
Lys
TTT
[ENA]
¡û
>W131219566
ATYR01000007
Betaproteobacteria
Massilia alkalitolerans DSM 17462 [ATYR]
154810
154735
-
Lys
TTT
[ENA]
¡û
>W1711326634
MBFM01000005
Betaproteobacteria
Thauera phenolivorans ZV-1-C [MBFM]
518808
518733
-
Lys
TTT
[ENA]
¡û
>W1711326635
MBFM01000005
Betaproteobacteria
Thauera phenolivorans ZV-1-C [MBFM]
518208
518133
-
Lys
TTT
[ENA]
¡û
>W131233951
AUKK01000048
Betaproteobacteria
Glomeribacter sp. 1016415 [AUKK]
45712
45787
+
Lys
TTT
[ENA]
¡û
>W131219572
ATYR01000014
Betaproteobacteria
Massilia alkalitolerans DSM 17462 [ATYR]
58252
58327
+
Lys
TTT
[ENA]
¡û
>W131225129
AUDI01000006
Betaproteobacteria
Pseudoduganella violaceinigra DSM 15887 [AUDI]
523128
523203
+
Lys
TTT
[ENA]
¡û
>W131225130
AUDI01000006
Betaproteobacteria
Pseudoduganella violaceinigra DSM 15887 [AUDI]
523222
523297
+
Lys
TTT
[ENA]
¡û
>W131225155
AUDI01000012
Betaproteobacteria
Pseudoduganella violaceinigra DSM 15887 [AUDI]
165887
165812
-
Lys
TTT
[ENA]
¡û
>W131225166
AUDI01000023
Betaproteobacteria
Pseudoduganella violaceinigra DSM 15887 [AUDI]
28083
28158
+
Lys
TTT
[ENA]
¡û
>W1711767630
MVAD01000001
Betaproteobacteria
Massilia sp. KIM [MVAD]
2337798
2337873
+
Lys
TTT
[ENA]
¡û
>W1711767650
MVAD01000002
Betaproteobacteria
Massilia sp. KIM [MVAD]
835316
835241
-
Lys
TTT
[ENA]
¡û
>W1711767651
MVAD01000002
Betaproteobacteria
Massilia sp. KIM [MVAD]
833448
833373
-
Lys
TTT
[ENA]
¡û
>C171085196
CP018839
Betaproteobacteria
Thauera chlorobenzoica 3CB1 [CP018839]
1734711
1734636
-
Lys
TTT
-
¡û
>C171088473
CP019038
Betaproteobacteria
Massilia putida 6NM-7 [CP019038]
2760758
2760833
+
Lys
TTT
-
¡û
>C171088474
CP019038
Betaproteobacteria
Massilia putida 6NM-7 [CP019038]
2762894
2762969
+
Lys
TTT
-
¡û
>C171088475
CP019038
Betaproteobacteria
Massilia putida 6NM-7 [CP019038]
2770595
2770670
+
Lys
TTT
-
¡û
>C171088512
CP019038
Betaproteobacteria
Massilia putida 6NM-7 [CP019038]
5989360
5989285
-
Lys
TTT
-
¡û
>WENV180027996
FTIZ01446690
[FTIZ] metagenome; soil
74
1
-
Lys
TTT
[ENA]
¡û
>WENV180296862
OBJA01003943
[OBJA] soil metagenome; sediment, water from around vicinity
5779
5704
-
Lys
TTT
[ENA]
¡û
>WENV183726559
PJTO01000011
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
207967
208042
+
Lys
TTT
[ENA]
¡û
>WENV183726636
PJTO01000044
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
137205
137130
-
Lys
TTT
[ENA]
¡û
>WENV183726637
PJTO01000044
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
128585
128510
-
Lys
TTT
[ENA]
¡û
>WENV183728334
PJTQ01000019
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
207967
208042
+
Lys
TTT
[ENA]
¡û
>WENV183728470
PJTQ01000064
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
137205
137130
-
Lys
TTT
[ENA]
¡û
>WENV183728471
PJTQ01000064
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
128585
128510
-
Lys
TTT
[ENA]
¡û
>WENV183733391
PJTY01001557
[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment
6187
6112
-
Lys
TTT
[ENA]
¡û
>WENV183734528
PJTZ01015627
[PJTZ] soil metagenome; Soil enriched (2) on filter paper
537
612
+
Lys
TTT
[ENA]
¡û
>WENV183737251
PJUD01001896
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
3096
3171
+
Lys
TTT
[ENA]
¡û
>WENV183737263
PJUD01002263
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
4333
4408
+
Lys
TTT
[ENA]
¡û
>WENV183737275
PJUD01002504
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
114
39
-
Lys
TTT
[ENA]
¡û
>WENV183737281
PJUD01002696
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
10
85
+
Lys
TTT
[ENA]
¡û
>WENV183738360
PJUD01176568
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
343
268
-
Lys
TTT
[ENA]
¡û
>WENV183739050
PJUE01001231
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
8461
8386
-
Lys
TTT
[ENA]
¡û
>WENV183740349
PJUF01001309
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
11825
11900
+
Lys
TTT
[ENA]
¡û
>WENV183740443
PJUF01002222
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
210
285
+
Lys
TTT
[ENA]
¡û
>WENV183740530
PJUF01003135
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
364
439
+
Lys
TTT
[ENA]
¡û
>WENV170561131
CZCA01003257
[CZCA] anaerobic digester metagenome; anaerobic digester
2333
2258
-
Lys
TTT
[ENA]
¡û
>WENV170575010
FLYN01023325
[FLYN] hot springs metagenome; Sediment
859
784
-
Lys
TTT
[ENA]
¡û
>WENV170575267
FLYN01052020
[FLYN] hot springs metagenome; Sediment
832
907
+
Lys
TTT
[ENA]
¡û
>WENV170650073
JRYD01009239
[JRYD] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 2 ppm DO
240
315
+
Lys
TTT
[ENA]
¡û
>WENV170651669
JRYG01000320
[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
217175
217100
-
Lys
TTT
[ENA]
¡û
>WENV170652592
JRYH01007676
[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
11171
11246
+
Lys
TTT
[ENA]
¡û
>WENV170652707
JRYH01017142
[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
5186
5261
+
Lys
TTT
[ENA]
¡û
>WENV170653100
JRYI01003350
[JRYI] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 1 ppm DO
5162
5237
+
Lys
TTT
[ENA]
¡û
>WENV170654152
JRYK01016387
[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
1289
1364
+
Lys
TTT
[ENA]
¡û
>WENV170654762
JRYL01014180
[JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different
3463
3538
+
Lys
TTT
[ENA]
¡û
>WENV170656005
JTFN01114620
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
6
81
+
Lys
TTT
[ENA]
¡û
>WENV170710311
LNFM01001511
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
3578
3503
-
Lys
TTT
[ENA]
¡û
>C191001062
AP018150
Betaproteobacteria
Mycoavidus cysteinexigens B1-EB [AP018150]
2151798
2151873
+
Lys
TTT
-
¡û
>W141739264
JNNN01000066
Betaproteobacteria
Massilia sp. LC238 [JNNN]
157488
157413
-
Lys
TTT
[ENA]
¡û
>W141739265
JNNN01000066
Betaproteobacteria
Massilia sp. LC238 [JNNN]
156649
156574
-
Lys
TTT
[ENA]
¡û
>W141739273
JNNN01000078
Betaproteobacteria
Massilia sp. LC238 [JNNN]
348518
348443
-
Lys
TTT
[ENA]
¡û
>W141811274
JPXI01000010
Betaproteobacteria
Massilia sp. BSC265 consociata [JPXI]
129210
129285
+
Lys
TTT
[ENA]
¡û
>W141811275
JPXI01000010
Betaproteobacteria
Massilia sp. BSC265 consociata [JPXI]
137473
137548
+
Lys
TTT
[ENA]
¡û
>W141811281
JPXI01000018
Betaproteobacteria
Massilia sp. BSC265 consociata [JPXI]
29157
29232
+
Lys
TTT
[ENA]
¡û
>W141821352
JQNN01000001
Betaproteobacteria
Massilia sp. 9096 [JQNN]
3253680
3253755
+
Lys
TTT
[ENA]
¡û
>W141821353
JQNN01000001
Betaproteobacteria
Massilia sp. 9096 [JQNN]
3255120
3255195
+
Lys
TTT
[ENA]
¡û
>W141821415
JQNN01000001
Betaproteobacteria
Massilia sp. 9096 [JQNN]
573641
573566
-
Lys
TTT
[ENA]
¡û
>W1810330112
PUIP01000002
Betaproteobacteria
Massilia phosphatilytica 12-OD1 [PUIP]
750
825
+
Lys
TTT
[ENA]
¡û
>W1810330113
PUIP01000002
Betaproteobacteria
Massilia phosphatilytica 12-OD1 [PUIP]
15369
15444
+
Lys
TTT
[ENA]
¡û
>W1810330127
PUIP01000007
Betaproteobacteria
Massilia phosphatilytica 12-OD1 [PUIP]
327782
327857
+
Lys
TTT
[ENA]
¡û
>W1810444914
PZKC01000009
Betaproteobacteria
Pseudothauera lacus D20 [PZKC]
162250
162325
+
Lys
TTT
[ENA]
¡û
>W2010309949
CABWLS010000011
Betaproteobacteria
Massilia sp. 9I [CABWLS]
40868
40943
+
Lys
TTT
[ENA]
¡û
>W2010309999
CABWLS010000018
Betaproteobacteria
Massilia sp. 9I [CABWLS]
111355
111280
-
Lys
TTT
[ENA]
¡û
>W2010310000
CABWLS010000018
Betaproteobacteria
Massilia sp. 9I [CABWLS]
102681
102606
-
Lys
TTT
[ENA]
¡û
>W2010488512
JAAIVB010000012
Betaproteobacteria
Noviherbaspirillum sp. 17J57-3 [JAAIVB]
24288
24363
+
Lys
TTT
[ENA]
¡û
>W2010535978
JAAQOM010000004
Betaproteobacteria
Massilia sp. TW-1 [JAAQOM]
303122
303197
+
Lys
TTT
[ENA]
¡û
>W2010535979
JAAQOM010000004
Betaproteobacteria
Massilia sp. TW-1 [JAAQOM]
305257
305332
+
Lys
TTT
[ENA]
¡û
>W2010535980
JAAQOM010000004
Betaproteobacteria
Massilia sp. TW-1 [JAAQOM]
326571
326646
+
Lys
TTT
[ENA]
¡û
>W2010536033
JAAQOM010000028
Betaproteobacteria
Massilia sp. TW-1 [JAAQOM]
34074
34149
+
Lys
TTT
[ENA]
¡û
>W2010598632
JABFMQ010000013
Betaproteobacteria
Herbaspirillum sp. C9C3 [JABFMQ]
134498
134573
+
Lys
TTT
[ENA]
¡û
>W2010696415
JACHCU010000003
Betaproteobacteria
Herbaspirillum sp. SJZ102 [JACHCU]
23656
23581
-
Lys
TTT
[ENA]
¡û
>W2011580006
SHKT01000001
Betaproteobacteria
Duganella sp. BK054 [SHKT]
1002022
1001947
-
Lys
TTT
[ENA]
¡û
>W2011580028
SHKT01000002
Betaproteobacteria
Duganella sp. BK054 [SHKT]
118653
118578
-
Lys
TTT
[ENA]
¡û
>W2011580029
SHKT01000002
Betaproteobacteria
Duganella sp. BK054 [SHKT]
118560
118485
-
Lys
TTT
[ENA]
¡û
>W2011580030
SHKT01000002
Betaproteobacteria
Duganella sp. BK054 [SHKT]
95286
95211
-
Lys
TTT
[ENA]
¡û
>W2011676010
SPUM01000109
Betaproteobacteria
Massilia sp. ONC3 [SPUM]
47399
47474
+
Lys
TTT
[ENA]
¡û
>W2011676011
SPUM01000109
Betaproteobacteria
Massilia sp. ONC3 [SPUM]
66268
66343
+
Lys
TTT
[ENA]
¡û
>W2011676013
SPUM01000109
Betaproteobacteria
Massilia sp. ONC3 [SPUM]
136850
136775
-
Lys
TTT
[ENA]
¡û
>W2011676014
SPUM01000109
Betaproteobacteria
Massilia sp. ONC3 [SPUM]
117981
117906
-
Lys
TTT
[ENA]
¡û
>W2011691853
SSOC01000006
Betaproteobacteria
Azoarcus sp. CC-YHH838 [SSOC]
118925
118850
-
Lys
TTT
[ENA]
¡û
>W2011691902
SSOD01000013
Betaproteobacteria
Azoarcus sp. CC-YHH848 [SSOD]
27797
27872
+
Lys
TTT
[ENA]
¡û
>W2011993098
VDUY01000001
Betaproteobacteria
Quisquiliibacterium sp. CC-CFT501 [VDUY]
476343
476418
+
Lys
TTT
[ENA]
¡û
>W2012082014
VLKW01000004
Betaproteobacteria
Massilia flava CGMCC 1.10685 [VLKW]
58803
58728
-
Lys
TTT
[ENA]
¡û
>W2012082033
VLKW01000009
Betaproteobacteria
Massilia flava CGMCC 1.10685 [VLKW]
114527
114452
-
Lys
TTT
[ENA]
¡û
>W2012082034
VLKW01000009
Betaproteobacteria
Massilia flava CGMCC 1.10685 [VLKW]
114427
114352
-
Lys
TTT
[ENA]
¡û
>W2012082291
VLLB01000001
Betaproteobacteria
Massilia lurida CGMCC 1.10822 [VLLB]
1495337
1495412
+
Lys
TTT
[ENA]
¡û
>W2012082292
VLLB01000001
Betaproteobacteria
Massilia lurida CGMCC 1.10822 [VLLB]
1495458
1495533
+
Lys
TTT
[ENA]
¡û
>W2012082319
VLLB01000005
Betaproteobacteria
Massilia lurida CGMCC 1.10822 [VLLB]
367278
367203
-
Lys
TTT
[ENA]
¡û
>W2012082320
VLLB01000005
Betaproteobacteria
Massilia lurida CGMCC 1.10822 [VLLB]
367159
367084
-
Lys
TTT
[ENA]
¡û
>W2012399112
WNKX01000001
Betaproteobacteria
Pseudoduganella eburnea JCM 31587 [WNKX]
368629
368704
+
Lys
TTT
[ENA]
¡û
>W2012399113
WNKX01000001
Betaproteobacteria
Pseudoduganella eburnea JCM 31587 [WNKX]
368723
368798
+
Lys
TTT
[ENA]
¡û
>W2012399114
WNKX01000001
Betaproteobacteria
Pseudoduganella eburnea JCM 31587 [WNKX]
391039
391114
+
Lys
TTT
[ENA]
¡û
>W2012399128
WNKX01000006
Betaproteobacteria
Pseudoduganella eburnea JCM 31587 [WNKX]
156424
156349
-
Lys
TTT
[ENA]
¡û
>W2012426958
WSES01000003
Betaproteobacteria
Massilia sp. NEAU-DD11 [WSES]
235968
235893
-
Lys
TTT
[ENA]
¡û
>W2012426959
WSES01000004
Betaproteobacteria
Massilia sp. NEAU-DD11 [WSES]
44505
44580
+
Lys
TTT
[ENA]
¡û
>W2012426960
WSES01000004
Betaproteobacteria
Massilia sp. NEAU-DD11 [WSES]
44895
44970
+
Lys
TTT
[ENA]
¡û
>W2012426961
WSES01000004
Betaproteobacteria
Massilia sp. NEAU-DD11 [WSES]
51678
51753
+
Lys
TTT
[ENA]
¡û
>W2012438138
WTVM01000093
Betaproteobacteria
Azoarcus taiwanensis NSC3 [WTVM]
10375
10300
-
Lys
TTT
[ENA]
¡û
>W2012469276
WWCJ01000004
Betaproteobacteria
Massilia guangdongensis DS3 [WWCJ]
109261
109186
-
Lys
TTT
[ENA]
¡û
>W2012469328
WWCJ01000029
Betaproteobacteria
Massilia guangdongensis DS3 [WWCJ]
37092
37017
-
Lys
TTT
[ENA]
¡û
>W2012469329
WWCJ01000032
Betaproteobacteria
Massilia guangdongensis DS3 [WWCJ]
26717
26792
+
Lys
TTT
[ENA]
¡û
>W2012469330
WWCJ01000032
Betaproteobacteria
Massilia guangdongensis DS3 [WWCJ]
26811
26886
+
Lys
TTT
[ENA]
¡û
>W2110018726
BMCG01000001
Betaproteobacteria
Oxalicibacterium flavum CCM 7086 [BMCG]
52930
53005
+
Lys
TTT
[ENA]
¡û
>W2110072057
BPMK01000021
Betaproteobacteria
Noviherbaspirillum sp. NCCP-691 [BPMK]
40863
40938
+
Lys
TTT
[ENA]
¡û
>W2110119787
CAJPFS010000131
Betaproteobacteria
Burkholderiales bacterium [CAJPFS]
9954
10029
+
Lys
TTT
[ENA]
¡û
>W2110263274
JACTAH010000002
Betaproteobacteria
Thauera sp. CAU 1555 [JACTAH]
441690
441765
+
Lys
TTT
[ENA]
¡û
>W2110289773
JACYTO010000002
Betaproteobacteria
Thauera sp. CAU 1555 [JACYTO]
441690
441765
+
Lys
TTT
[ENA]
¡û
>W2110331063
JADKYX010000007
Betaproteobacteria
Massilia rhizosphaerae NEAU-GH312 [JADKYX]
268844
268769
-
Lys
TTT
[ENA]
¡û
>W2110331101
JADKYX010000020
Betaproteobacteria
Massilia rhizosphaerae NEAU-GH312 [JADKYX]
26198
26273
+
Lys
TTT
[ENA]
¡û
>W2110331112
JADKYX010000036
Betaproteobacteria
Massilia rhizosphaerae NEAU-GH312 [JADKYX]
9080
9155
+
Lys
TTT
[ENA]
¡û
>W2110331113
JADKYX010000036
Betaproteobacteria
Massilia rhizosphaerae NEAU-GH312 [JADKYX]
9466
9541
+
Lys
TTT
[ENA]
¡û
>W2110437938
JAEPBG010000001
Betaproteobacteria
Noviherbaspirillum pedocola DKR-6 [JAEPBG]
710537
710612
+
Lys
TTT
[ENA]
¡û
>W2110437939
JAEPBG010000001
Betaproteobacteria
Noviherbaspirillum pedocola DKR-6 [JAEPBG]
710705
710780
+
Lys
TTT
[ENA]
¡û
>W2110520700
JAFVIM010000023
Betaproteobacteria
Massilia oculi HYUMC2021 [JAFVIM]
7827
7752
-
Lys
TTT
[ENA]
¡û
>W2110520707
JAFVIM010000029
Betaproteobacteria
Massilia oculi HYUMC2021 [JAFVIM]
2719
2794
+
Lys
TTT
[ENA]
¡û
>W2110560742
JAGKSG010000007
Betaproteobacteria
Massilia sp. AB1 [JAGKSG]
154007
154082
+
Lys
TTT
[ENA]
¡û
>W2110560743
JAGKSG010000007
Betaproteobacteria
Massilia sp. AB1 [JAGKSG]
154849
154924
+
Lys
TTT
[ENA]
¡û
>W2110560779
JAGKSG010000045
Betaproteobacteria
Massilia sp. AB1 [JAGKSG]
26718
26793
+
Lys
TTT
[ENA]
¡û
>W2110663636
JAHYBX010000001
Betaproteobacteria
Massilia oculi HSC-2F05 [JAHYBX]
276793
276718
-
Lys
TTT
[ENA]
¡û
>W2110663637
JAHYBX010000001
Betaproteobacteria
Massilia oculi HSC-2F05 [JAHYBX]
274296
274221
-
Lys
TTT
[ENA]
¡û
>W2110663674
JAHYBX010000009
Betaproteobacteria
Massilia oculi HSC-2F05 [JAHYBX]
51551
51626
+
Lys
TTT
[ENA]
¡û
>C211002285
AP021872
Betaproteobacteria
Mycoavidus sp. B2-EB [AP021872]
1429206
1429281
+
Lys
TTT
-
¡û
>C211123998
CP059560
Betaproteobacteria
Aromatoleum petrolei ToN1 [CP059560]
2369647
2369722
+
Lys
TTT
-
¡û
>C211193303
CP064781
Betaproteobacteria
Azospira restricta DSM 18626 [CP064781]
1097099
1097024
-
Lys
TTT
-
¡û
>W2110706639
JAIWIA010000036
Betaproteobacteria
Massilia sp. MS-15 [JAIWIA]
38001
38076
+
Lys
TTT
[ENA]
¡û
>W2110706640
JAIWIA010000036
Betaproteobacteria
Massilia sp. MS-15 [JAIWIA]
41604
41679
+
Lys
TTT
[ENA]
¡û
>W2110706648
JAIWIA010000048
Betaproteobacteria
Massilia sp. MS-15 [JAIWIA]
5413
5488
+
Lys
TTT
[ENA]
¡û
>W1510013100
BBOF01000078
Betaproteobacteria
bacterium endosymbiont of Mortierella elongata FMR23-6 [BBOF]
14215
14140
-
Lys
TTT
[ENA]
¡û
>C231399249
CP098242
Betaproteobacteria
Oxalobacter vibrioformis WoOx3 [CP098242]
930548
930623
+
Lys
TTT
-
¡û
>C231623011
CP119520
Betaproteobacteria
Telluria mixta ACM 1762 [CP119520]
7387086
7387161
+
Lys
TTT
-
¡û
>C231623023
CP119520
Betaproteobacteria
Telluria mixta ACM 1762 [CP119520]
3299021
3298946
-
Lys
TTT
-
¡û
>C231623024
CP119520
Betaproteobacteria
Telluria mixta ACM 1762 [CP119520]
3289575
3289500
-
Lys
TTT
-
¡û
>C241113979
CP046904
Betaproteobacteria
Pseudoduganella flava DSM 26639 [CP046904]
2417707
2417782
+
Lys
TTT
-
¡û
>C241114015
CP046904
Betaproteobacteria
Pseudoduganella flava DSM 26639 [CP046904]
5760756
5760681
-
Lys
TTT
-
¡û
>C241114016
CP046904
Betaproteobacteria
Pseudoduganella flava DSM 26639 [CP046904]
5760640
5760565
-
Lys
TTT
-
¡û
>C241114017
CP046904
Betaproteobacteria
Pseudoduganella flava DSM 26639 [CP046904]
5760540
5760465
-
Lys
TTT
-
¡û
>W2130033442
JAGPWC010000040
Betaproteobacteria
Massilia sp. ST3 [JAGPWC]
28652
28727
+
Lys
TTT
[ENA]
¡û
>W2130033454
JAGPWC010000070
Betaproteobacteria
Massilia sp. ST3 [JAGPWC]
18702
18627
-
Lys
TTT
[ENA]
¡û
>W2130033455
JAGPWC010000070
Betaproteobacteria
Massilia sp. ST3 [JAGPWC]
8530
8455
-
Lys
TTT
[ENA]
¡û
>W2130033508
JAGPWD010000040
Betaproteobacteria
Massilia sp. ZL223 [JAGPWD]
35533
35608
+
Lys
TTT
[ENA]
¡û
>W2130033509
JAGPWD010000040
Betaproteobacteria
Massilia sp. ZL223 [JAGPWD]
36375
36450
+
Lys
TTT
[ENA]
¡û
>W2130033515
JAGPWD010000051
Betaproteobacteria
Massilia sp. ZL223 [JAGPWD]
8426
8351
-
Lys
TTT
[ENA]
¡û
>W2310024775
BSOD01000002
Betaproteobacteria
Mycoavidus cysteinexigens NBRC 110909 [BSOD]
75100
75175
+
Lys
TTT
[ENA]
¡û
>W1511310203
JPQD01000028
Betaproteobacteria
Massilia sp. JS1662 [JPQD]
60028
59953
-
Lys
TTT
[ENA]
¡û
>W1511310204
JPQD01000029
Betaproteobacteria
Massilia sp. JS1662 [JPQD]
5815
5890
+
Lys
TTT
[ENA]
¡û
>W1511310231
JPQD01000179
Betaproteobacteria
Massilia sp. JS1662 [JPQD]
510
435
-
Lys
TTT
[ENA]
¡û
>W1511310232
JPQD01000179
Betaproteobacteria
Massilia sp. JS1662 [JPQD]
122
47
-
Lys
TTT
[ENA]
¡û
>W1511657406
LELH02000006
Betaproteobacteria
Massilia sp. WF1 [LELH]
37491
37566
+
Lys
TTT
[ENA]
¡û
>W1511657444
LELH02000032
Betaproteobacteria
Massilia sp. WF1 [LELH]
7249
7174
-
Lys
TTT
[ENA]
¡û
>W1511657445
LELH02000032
Betaproteobacteria
Massilia sp. WF1 [LELH]
5147
5072
-
Lys
TTT
[ENA]
¡û
>C161043176
CP012640
Betaproteobacteria
Massilia sp. WG5 [CP012640]
5170394
5170469
+
Lys
TTT
-
¡û
>C161043177
CP012640
Betaproteobacteria
Massilia sp. WG5 [CP012640]
5172496
5172571
+
Lys
TTT
-
¡û
>C161043220
CP012640
Betaproteobacteria
Massilia sp. WG5 [CP012640]
2128709
2128634
-
Lys
TTT
-
¡û
>W1610723013
LMDB01000012
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
604858
604783
-
Lys
TTT
[ENA]
¡û
>W1610723024
LMDB01000035
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
285149
285224
+
Lys
TTT
[ENA]
¡û
>W1610723025
LMDB01000035
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
285242
285317
+
Lys
TTT
[ENA]
¡û
>W1610723026
LMDB01000035
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
311632
311707
+
Lys
TTT
[ENA]
¡û
>W1610725470
LMEW01000012
Betaproteobacteria
Massilia sp. Root133 [LMEW]
200763
200688
-
Lys
TTT
[ENA]
¡û
>W1610725478
LMEW01000023
Betaproteobacteria
Massilia sp. Root133 [LMEW]
442516
442441
-
Lys
TTT
[ENA]
¡û
>W1610725479
LMEW01000023
Betaproteobacteria
Massilia sp. Root133 [LMEW]
435732
435657
-
Lys
TTT
[ENA]
¡û
>W1610725501
LMEW01000035
Betaproteobacteria
Massilia sp. Root133 [LMEW]
3274
3199
-
Lys
TTT
[ENA]
¡û
>W1610726930
LMFZ01000005
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
190328
190403
+
Lys
TTT
[ENA]
¡û
>W1610726943
LMFZ01000034
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
323985
324060
+
Lys
TTT
[ENA]
¡û
>W1610726944
LMFZ01000034
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
324078
324153
+
Lys
TTT
[ENA]
¡û
>W1610726945
LMFZ01000034
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
350335
350410
+
Lys
TTT
[ENA]
¡û
>W1610729565
LMIC01000006
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
43832
43907
+
Lys
TTT
[ENA]
¡û
>W1610729566
LMIC01000006
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
43925
44000
+
Lys
TTT
[ENA]
¡û
>W1610729567
LMIC01000006
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
70316
70391
+
Lys
TTT
[ENA]
¡û
>W1610729580
LMIC01000015
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
9716
9791
+
Lys
TTT
[ENA]
¡û
>WENV077457
AAFX01041995
Soil microbial communities from Minnesota Farm
462
537
+
Lys
TTT
[ENA]
>W1611063370
MBFM01000005
Betaproteobacteria
Thauera phenolivorans ZV-1-C [MBFM]
518808
518733
-
Lys
TTT
[ENA]
¡û
>W1611063371
MBFM01000005
Betaproteobacteria
Thauera phenolivorans ZV-1-C [MBFM]
518208
518133
-
Lys
TTT
[ENA]
¡û
>W1710512800
FMZS01000001
Betaproteobacteria
Massilia sp. PDC64 [FMZS]
456294
456369
+
Lys
TTT
[ENA]
¡û
>W1710512801
FMZS01000001
Betaproteobacteria
Massilia sp. PDC64 [FMZS]
456682
456757
+
Lys
TTT
[ENA]
¡û
>W1710512802
FMZS01000001
Betaproteobacteria
Massilia sp. PDC64 [FMZS]
479471
479546
+
Lys
TTT
[ENA]
¡û
>W1710512810
FMZS01000002
Betaproteobacteria
Massilia sp. PDC64 [FMZS]
631704
631629
-
Lys
TTT
[ENA]
¡û
>W1710539461
FNVJ01000013
Betaproteobacteria
Thauera chlorobenzoica [FNVJ]
15656
15581
-
Lys
TTT
[ENA]
¡û
>W1710561537
FOOF01000014
Betaproteobacteria
Duganella sp. CF458 [FOOF]
157641
157716
+
Lys
TTT
[ENA]
¡û
>W1710561544
FOOF01000018
Betaproteobacteria
Duganella sp. CF458 [FOOF]
126498
126423
-
Lys
TTT
[ENA]
¡û
>W1710561545
FOOF01000018
Betaproteobacteria
Duganella sp. CF458 [FOOF]
126405
126330
-
Lys
TTT
[ENA]
¡û
>W1710561546
FOOF01000018
Betaproteobacteria
Duganella sp. CF458 [FOOF]
101526
101451
-
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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