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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.261192 (10 seq.)
>W131172404
ARGW01000093
Actinomycetota
Micromonospora sp. CNB394 [ARGW]
486345
486418
+
Glu
CTC
[ENA]
¡û
>C181193618
CP030865
Actinomycetota
Micromonospora sp. B006 [CP030865]
2550960
2550887
-
Glu
CTC
-
¡û
>W141767704
JOEU01000004
Actinomycetota
Micromonospora purpureochromogenes [JOEU]
116426
116499
+
Glu
CTC
[ENA]
¡û
>W1810722155
QNTW01000190
Actinomycetota
Micromonospora provocatoris MT25 [QNTW]
3786
3859
+
Glu
CTC
[ENA]
¡û
>W2010364426
CADEAV010000099
Actinomycetota
Micromonospora sp. MC-2019 [CADEAV]
6480
6553
+
Glu
CTC
[ENA]
¡û
>W2010704738
JACHJC010000001
Actinomycetota
Micromonospora echinospora DSM 43036 [JACHJC]
4430933
4430860
-
Glu
CTC
[ENA]
¡û
>W2012221625
WAAR01000119
Actinomycetota
Micromonospora aurantiaca ALFB5 [WAAR]
19417
19344
-
Glu
CTC
[ENA]
¡û
>W2110635532
JAHOPD010000020
Actinomycetota
Micromonospora sp. WMMB482 [JAHOPD]
5815456
5815383
-
Glu
CTC
[ENA]
¡û
>C231194209
CP084582
Actinomycetota
Micromonospora aurantiaca G9 [CP084582]
3742309
3742236
-
Glu
CTC
-
¡û
>W1710773158
LIVU01000003
Actinomycetota
Micromonospora sp. TSRI0369 [LIVU]
826669
826742
+
Glu
CTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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