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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.268376 (9 seq.)
>W1711065154
LSBO01000079
Bacillota
Candidatus Frackibacter sp. T328-2 T328-2 [LSBO]
4902
4977
+
Asn
GTT
[ENA]
¡û
>W1610905943
LSBO01000079
Bacillota
Candidatus Frackibacter sp. T328-2 T328-2 [LSBO]
4902
4977
+
Asn
GTT
[ENA]
¡û
>W1710512888
FMZT01000007
Bacillota
Candidatus Frackibacter sp. WG11 alkaliacetigena [FMZT]
104643
104568
-
Asn
GTT
[ENA]
¡û
>W1710512916
FMZT01000017
Bacillota
Candidatus Frackibacter sp. WG11 alkaliacetigena [FMZT]
15806
15881
+
Asn
GTT
[ENA]
¡û
>W1710546197
FOCA01000016
Bacillota
Candidatus Frackibacter sp. WG12 alkaliacetigena [FOCA]
44354
44279
-
Asn
GTT
[ENA]
¡û
>W1710568633
FOTT01000010
Bacillota
Candidatus Frackibacter sp. WG13 alkaliacetigena [FOTT]
90758
90683
-
Asn
GTT
[ENA]
¡û
>W1710568656
FOTT01000018
Bacillota
Candidatus Frackibacter sp. WG13 alkaliacetigena [FOTT]
15789
15864
+
Asn
GTT
[ENA]
¡û
>W1710600464
FUWM01000005
Bacillota
Selenihalanaerobacter shriftii [FUWM]
692
767
+
Asn
GTT
[ENA]
¡û
>W1710600484
FUWM01000012
Bacillota
Selenihalanaerobacter shriftii [FUWM]
52095
52170
+
Asn
GTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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