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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.270625 (6 seq.)
>C233004171
CP090009
Thermodesulfobacteriota
Paradesulfovibrio bizertensis SY-1 [CP090009]
2780251
2780329
+
Ile
GAT
-
¡û
>C233004172
CP090009
Thermodesulfobacteriota
Paradesulfovibrio bizertensis SY-1 [CP090009]
2489093
2489015
-
Ile
GAT
-
¡û
>C233004173
CP090009
Thermodesulfobacteriota
Paradesulfovibrio bizertensis SY-1 [CP090009]
2483281
2483203
-
Ile
GAT
-
¡û
>C233004174
CP090009
Thermodesulfobacteriota
Paradesulfovibrio bizertensis SY-1 [CP090009]
2138514
2138436
-
Ile
GAT
-
¡û
>C233004175
CP090009
Thermodesulfobacteriota
Paradesulfovibrio bizertensis SY-1 [CP090009]
1561221
1561143
-
Ile
GAT
-
¡û
>W1730010774
FUYA01000027
Thermodesulfobacteriota
Desulfobaculum bizertense DSM 18034 [FUYA]
1988
2066
+
Ile
GAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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