This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.270758 (56 seq.)
>W1710872056
LMLR01000015
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
83299
83373
+
Leu
TAA
[ENA]
¡û
>W1710875613
LMON01000012
Actinomycetota
Arthrobacter sp. Leaf145 [LMON]
222071
222147
+
Leu
TAA
[ENA]
¡û
>W1710916197
LNUV01000003
Actinomycetota
Arthrobacter sp. EpRS71 [LNUV]
143837
143913
+
Leu
TAA
[ENA]
¡û
>W1711124371
LUKB01000002
Actinomycetota
Arthrobacter sp. D2 [LUKB]
190852
190776
-
Leu
TAA
[ENA]
¡û
>W1711124432
LUKC01000023
Actinomycetota
Arthrobacter sp. D4 [LUKC]
27985
28061
+
Leu
TAA
[ENA]
¡û
>W1711724064
MTPV01000020
Actinomycetota
Arthrobacter sp. SRS-W-1-2016 [MTPV]
23025
22951
-
Leu
TAA
[ENA]
¡û
>C171040593
CP015732
Actinomycetota
Arthrobacter sp. U41 [CP015732]
2415505
2415579
+
Leu
TAA
-
¡û
>C171062255
CP017421
Actinomycetota
Arthrobacter sp. ZXY-2 [CP017421]
2858278
2858202
-
Leu
TAA
-
¡û
>W131172209
ARGT01000021
Actinomycetota
Arthrobacter sp. 131MFCol6.1 [ARGT]
134670
134596
-
Leu
TAA
[ENA]
¡û
>W131172281
ARGU01000043
Actinomycetota
Arthrobacter sp. 161MFSha2.1 [ARGU]
228298
228372
+
Leu
TAA
[ENA]
¡û
>W131237713
AUPJ01000196
Actinomycetota
Arthrobacter sp. TB 26 [AUPJ]
1655
1581
-
Leu
TAA
[ENA]
¡û
>C000052
CP000474
Actinomycetota
Paenarthrobacter aurescens TC1 [CP000474]
1355200
1355276
+
Leu
TAA
[Ensembl]
¡û
>WENV180018459
FSZH01000459
[FSZH] metagenome; soil
2999
2925
-
Leu
TAA
[ENA]
¢þ
>WENV180019642
FTCF01000169
[FTCF] metagenome; soil
7087
7013
-
Leu
TAA
[ENA]
¢þ
>WENV180027143
FTIW01344041
[FTIW] metagenome; soil
49
123
+
Leu
TAA
[ENA]
¢þ
>WENV180029901
FTJL01016838
[FTJL] metagenome; soil
51
125
+
Leu
TAA
[ENA]
¢þ
>WENV180039635
LLBY010108947
[LLBY] soil metagenome; soil from tomato rhizosphere
323
247
-
Leu
TAA
[ENA]
¢þ
>W141065994
AQRI01000013
Actinomycetota
Arthrobacter sp. MA-N2 [AQRI]
506742
506816
+
Leu
TAA
[ENA]
¡û
>W141106065
AVPD01000004
Actinomycetota
Arthrobacter sp. AK-YN10 [AVPD]
208614
208538
-
Leu
TAA
[ENA]
¡û
>W141213504
AZSB01000096
Actinomycetota
Arthrobacter sp. I3 [AZSB]
1057
1131
+
Leu
TAA
[ENA]
¡û
>W141216723
AZVC01000004
Actinomycetota
Paenarthrobacter nicotinovorans 231Sha2.1M6 [AZVC]
125652
125578
-
Leu
TAA
[ENA]
¡û
>W141217154
AZVJ01000010
Actinomycetota
Paenarthrobacter nicotinovorans 26Cvi1.1E [AZVJ]
19520
19446
-
Leu
TAA
[ENA]
¡û
>W141278862
JAFW01000001
Actinomycetota
Arthrobacter sp. 31Y [JAFW]
3808845
3808919
+
Leu
TAA
[ENA]
¡û
>C181064957
CP022436
Actinomycetota
Arthrobacter sp. YN [CP022436]
1460085
1460159
+
Leu
TAA
-
¡û
>C191164636
CP039290
Actinomycetota
Arthrobacter sp. PAMC25564 [CP039290]
3788275
3788201
-
Leu
TAA
-
¡û
>W141565201
JIBJ01000006
Actinomycetota
Arthrobacter sp. 9MFCol3.1 [JIBJ]
203910
203836
-
Leu
TAA
[ENA]
¡û
>W1910181578
BJMD01000008
Actinomycetota
Paenarthrobacter aurescens NBRC 12136 [BJMD]
72640
72566
-
Leu
TAA
[ENA]
¡û
>W1911566821
PCPC01000036
Actinomycetota
Arthrobacter sp. MYb51 [PCPC]
16321
16247
-
Leu
TAA
[ENA]
¡û
>W1911567593
PCPR01000037
Actinomycetota
Arthrobacter sp. MYb23 [PCPR]
16321
16247
-
Leu
TAA
[ENA]
¡û
>W1810424168
PYUI01000004
Actinomycetota
Arthrobacter sp. H-02-3 LBUM149 [PYUI]
99203
99277
+
Leu
TAA
[ENA]
¡û
>W1810676803
QKMG01000003
Actinomycetota
Paenarthrobacter nicotinovorans 25_8 [QKMG]
96687
96761
+
Leu
TAA
[ENA]
¡û
>W1510018502
BBUD01000283
Actinomycetota
Arthrobacter sp. Hiyo1 [BBUD]
7517
7443
-
Leu
TAA
[ENA]
¡û
>W1510018533
BBUE01000037
Actinomycetota
Arthrobacter sp. Hiyo6 [BBUE]
1069
1143
+
Leu
TAA
[ENA]
¡û
>W1510641743
CVLG01000001
Actinomycetota
Paenarthrobacter nitroguajacolicus HG [CVLG]
1774689
1774763
+
Leu
TAA
[ENA]
¡û
>W1511319613
JPZK01000018
Actinomycetota
Arthrobacter sp. MWB30 [JPZK]
259630
259704
+
Leu
TAA
[ENA]
¡û
>C161001342
AP014719
Actinomycetota
Arthrobacter sp. Hiyo8 [AP014719]
1258076
1258002
-
Leu
TAA
-
¡û
>C161068050
CP014196
Actinomycetota
Arthrobacter sp. ATCC 21022 [CP014196]
1213443
1213519
+
Leu
TAA
-
¡û
>W121086807
AKKK01000015
Actinomycetota
Arthrobacter sp. M2012083 [AKKK]
62571
62497
-
Leu
TAA
[ENA]
¡û
>W1610050309
BBFS01000014
Actinomycetota
Paenarthrobacter nitroguajacolicus JCM 14115 [BBFS]
61978
62052
+
Leu
TAA
[ENA]
¡û
>W1610081877
BDDW01000002
Actinomycetota
Paenarthrobacter nicotinovorans [BDDW]
284951
284877
-
Leu
TAA
[ENA]
¡û
>C131002301
CP003203
Actinomycetota
Arthrobacter sp. Rue61a [CP003203]
1295811
1295887
+
Leu
TAA
[Ensembl]
¡û
>W1610527124
JPWK01000016
Actinomycetota
Arthrobacter sp. ATCC 21022 ATCC 21022 KY 3901 [JPWK]
281015
281091
+
Leu
TAA
[ENA]
¡û
>W1610734402
LMLR01000015
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
83299
83373
+
Leu
TAA
[ENA]
¡û
>W1610737959
LMON01000012
Actinomycetota
Arthrobacter sp. Leaf145 [LMON]
222071
222147
+
Leu
TAA
[ENA]
¡û
>W1610774436
LNUV01000003
Actinomycetota
Arthrobacter sp. EpRS71 [LNUV]
143837
143913
+
Leu
TAA
[ENA]
¡û
>W1710046708
BBFS01000014
Actinomycetota
Paenarthrobacter nitroguajacolicus JCM 14115 [BBFS]
61978
62052
+
Leu
TAA
[ENA]
¡û
>W1710080592
BDDW01000002
Actinomycetota
Paenarthrobacter nicotinovorans [BDDW]
284951
284877
-
Leu
TAA
[ENA]
¡û
>W1710084537
BDMH01000015
Actinomycetota
Paenarthrobacter ureafaciens KI72 [BDMH]
301666
301590
-
Leu
TAA
[ENA]
¡û
>W1710508496
FMWE01000002
Actinomycetota
Arthrobacter sp. UNCCL28 [FMWE]
587342
587268
-
Leu
TAA
[ENA]
¡û
>W1710521055
FNGC01000001
Actinomycetota
Arthrobacter sp. ok362 [FNGC]
101048
101122
+
Leu
TAA
[ENA]
¡û
>W1710521112
FNGD01000002
Actinomycetota
Arthrobacter sp. ov407 [FNGD]
370712
370638
-
Leu
TAA
[ENA]
¡û
>W1710525659
FNJS01000005
Actinomycetota
Arthrobacter sp. ok909 [FNJS]
122278
122204
-
Leu
TAA
[ENA]
¡û
>W1710528986
FNNR01000001
Actinomycetota
Arthrobacter sp. cf158 [FNNR]
353435
353509
+
Leu
TAA
[ENA]
¡û
>W1710541436
FNYI01000002
Actinomycetota
Arthrobacter sp. yr096 [FNYI]
298297
298223
-
Leu
TAA
[ENA]
¡û
>W1710603424
FUZB01000002
Actinomycetota
Arthrobacter sp. 31Cvi3.1E [FUZB]
281142
281068
-
Leu
TAA
[ENA]
¡û
>W1710603524
FUZD01000009
Actinomycetota
Arthrobacter sp. 49Tsu3.1M3 [FUZD]
60811
60737
-
Leu
TAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK