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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.271471 (6 seq.)
>W1711414440
MGZL01000139
Thermodesulfobacteriota
Geobacteraceae bacterium GWC2_58_44 [MGZL]
9400
9325
-
Thr
CGT
[ENA]
¡û
>W09133631
ACPJ01000046
Thermodesulfobacteriota
Geobacter sp. M18 [ACPJ]
962
1037
+
Thr
CGT
[ENA]
¡û
>W2110617988
JAHLMF010000003
Thermodesulfobacteriota
Geomonas diazotrophica Red69 [JAHLMF]
186915
186840
-
Thr
CGT
[ENA]
¡û
>C211349388
CP076724
Thermodesulfobacteriota
Geomonas sp. RG29 [CP076724]
3654969
3655044
+
Thr
CGT
-
¡û
>C211359198
CP077684
Thermodesulfobacteriota
Geomonas sp. RF4 [CP077684]
3773931
3774006
+
Thr
CGT
-
¡û
>C11109602
CP002479
Thermodesulfobacteriota
Geobacter sp. M18 [CP002479]
701737
701662
-
Thr
CGT
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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