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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.273594 (5 seq.)
>WENV180250441
OBEQ010284157
[OBEQ] groundwater metagenome; groundwater
285
361
+
Glu
TTC
[ENA]
¡û
>WENV183682582
ORMF010462622
[ORMF] groundwater metagenome; groundwater
220
296
+
Glu
TTC
[ENA]
¡û
>W1910725550
MGLY01000092
Chlamydiota
Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9 [MGLY]
2621
2699
+
Glu
TTC
[ENA]
¡û
>W2010858977
MGLY01000092
Chlamydiota
Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9 [MGLY]
2621
2699
+
Glu
TTC
[ENA]
¡û
>WENV058931
AACY023347520
Marine microbial communities from Global Ocean Sampling (GOS)
1270
1349
+
Glu
TTC
[ENA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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