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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.273853 (81 seq.)
>WENV181524853
OGHI01001816
[OGHI] metagenome; Human gut stool
6555
6632
+
Asp
GTC
[ENA]
¡û
>W1910194448
FAUS01000008
Fusobacteriota
Fusobacterium sp. [FAUS]
1308678
1308755
+
Asp
GTC
[ENA]
¡û
>W1910194467
FAUS01000008
Fusobacteriota
Fusobacterium sp. [FAUS]
1393372
1393449
+
Asp
GTC
[ENA]
¡û
>W1910194478
FAUS01000008
Fusobacteriota
Fusobacterium sp. [FAUS]
1394344
1394421
+
Asp
GTC
[ENA]
¡û
>W1910194505
FAUS01000008
Fusobacteriota
Fusobacterium sp. [FAUS]
557166
557089
-
Asp
GTC
[ENA]
¡û
>W2010372846
FAUS01000008
Fusobacteriota
Fusobacterium sp. [FAUS]
1308678
1308755
+
Asp
GTC
[ENA]
¡û
>W2010372865
FAUS01000008
Fusobacteriota
Fusobacterium sp. [FAUS]
1393372
1393449
+
Asp
GTC
[ENA]
¡û
>W2010372876
FAUS01000008
Fusobacteriota
Fusobacterium sp. [FAUS]
1394344
1394421
+
Asp
GTC
[ENA]
¡û
>W2010372903
FAUS01000008
Fusobacteriota
Fusobacterium sp. [FAUS]
557166
557089
-
Asp
GTC
[ENA]
¡û
>W2110374287
JADRFX010000023
Fusobacteriota
Fusobacterium sp. DD43 [JADRFX]
7409
7486
+
Asp
GTC
[ENA]
¡û
>W2110374311
JADRFX010000068
Fusobacteriota
Fusobacterium sp. DD43 [JADRFX]
10605
10682
+
Asp
GTC
[ENA]
¡û
>W2110374324
JADRFX010000074
Fusobacteriota
Fusobacterium sp. DD43 [JADRFX]
3262
3339
+
Asp
GTC
[ENA]
¡û
>W2110374335
JADRFX010000074
Fusobacteriota
Fusobacterium sp. DD43 [JADRFX]
4240
4317
+
Asp
GTC
[ENA]
¡û
>W2110374447
JADRGA010000023
Fusobacteriota
Fusobacterium sp. DD40 [JADRGA]
25144
25067
-
Asp
GTC
[ENA]
¡û
>W2110374469
JADRGA010000070
Fusobacteriota
Fusobacterium sp. DD40 [JADRGA]
2097
2020
-
Asp
GTC
[ENA]
¡û
>W2110374482
JADRGA010000076
Fusobacteriota
Fusobacterium sp. DD40 [JADRGA]
3262
3339
+
Asp
GTC
[ENA]
¡û
>W2110374493
JADRGA010000076
Fusobacteriota
Fusobacterium sp. DD40 [JADRGA]
4240
4317
+
Asp
GTC
[ENA]
¡û
>W2110375012
JADRGL010000023
Fusobacteriota
Fusobacterium sp. DD29 [JADRGL]
7409
7486
+
Asp
GTC
[ENA]
¡û
>W2110375036
JADRGL010000069
Fusobacteriota
Fusobacterium sp. DD29 [JADRGL]
2097
2020
-
Asp
GTC
[ENA]
¡û
>W2110375049
JADRGL010000075
Fusobacteriota
Fusobacterium sp. DD29 [JADRGL]
3262
3339
+
Asp
GTC
[ENA]
¡û
>W2110375060
JADRGL010000075
Fusobacteriota
Fusobacterium sp. DD29 [JADRGL]
4240
4317
+
Asp
GTC
[ENA]
¡û
>W2110375166
JADRGP010000023
Fusobacteriota
Fusobacterium sp. DD25 [JADRGP]
7409
7486
+
Asp
GTC
[ENA]
¡û
>W2110375188
JADRGP010000068
Fusobacteriota
Fusobacterium sp. DD25 [JADRGP]
2097
2020
-
Asp
GTC
[ENA]
¡û
>W2110375201
JADRGP010000074
Fusobacteriota
Fusobacterium sp. DD25 [JADRGP]
8885
8808
-
Asp
GTC
[ENA]
¡û
>W2110375212
JADRGP010000074
Fusobacteriota
Fusobacterium sp. DD25 [JADRGP]
7907
7830
-
Asp
GTC
[ENA]
¡û
>W2110375542
JADRGX010000023
Fusobacteriota
Fusobacterium sp. DD17 [JADRGX]
25145
25068
-
Asp
GTC
[ENA]
¡û
>W2110375566
JADRGX010000069
Fusobacteriota
Fusobacterium sp. DD17 [JADRGX]
2095
2018
-
Asp
GTC
[ENA]
¡û
>W2110375579
JADRGX010000074
Fusobacteriota
Fusobacterium sp. DD17 [JADRGX]
3262
3339
+
Asp
GTC
[ENA]
¡û
>W2110375590
JADRGX010000074
Fusobacteriota
Fusobacterium sp. DD17 [JADRGX]
4240
4317
+
Asp
GTC
[ENA]
¡û
>W2110375691
JADRHA010000023
Fusobacteriota
Fusobacterium sp. DD14 [JADRHA]
7409
7486
+
Asp
GTC
[ENA]
¡û
>W2110375715
JADRHA010000069
Fusobacteriota
Fusobacterium sp. DD14 [JADRHA]
2097
2020
-
Asp
GTC
[ENA]
¡û
>W2110375728
JADRHA010000075
Fusobacteriota
Fusobacterium sp. DD14 [JADRHA]
3262
3339
+
Asp
GTC
[ENA]
¡û
>W2110375739
JADRHA010000075
Fusobacteriota
Fusobacterium sp. DD14 [JADRHA]
4240
4317
+
Asp
GTC
[ENA]
¡û
>W2110375754
JADRHB010000022
Fusobacteriota
Fusobacterium sp. DD13 [JADRHB]
25143
25066
-
Asp
GTC
[ENA]
¡û
>W2110375778
JADRHB010000069
Fusobacteriota
Fusobacterium sp. DD13 [JADRHB]
2095
2018
-
Asp
GTC
[ENA]
¡û
>W2110375791
JADRHB010000074
Fusobacteriota
Fusobacterium sp. DD13 [JADRHB]
8885
8808
-
Asp
GTC
[ENA]
¡û
>W2110375802
JADRHB010000074
Fusobacteriota
Fusobacterium sp. DD13 [JADRHB]
7907
7830
-
Asp
GTC
[ENA]
¡û
>W2110375814
JADRHC010000023
Fusobacteriota
Fusobacterium sp. DD12 [JADRHC]
7409
7486
+
Asp
GTC
[ENA]
¡û
>W2110375838
JADRHC010000069
Fusobacteriota
Fusobacterium sp. DD12 [JADRHC]
10603
10680
+
Asp
GTC
[ENA]
¡û
>W2110375851
JADRHC010000074
Fusobacteriota
Fusobacterium sp. DD12 [JADRHC]
3262
3339
+
Asp
GTC
[ENA]
¡û
>W2110375862
JADRHC010000074
Fusobacteriota
Fusobacterium sp. DD12 [JADRHC]
4240
4317
+
Asp
GTC
[ENA]
¡û
>W2110375918
JADRHE010000023
Fusobacteriota
Fusobacterium sp. DD10 [JADRHE]
25144
25067
-
Asp
GTC
[ENA]
¡û
>W2110375941
JADRHE010000068
Fusobacteriota
Fusobacterium sp. DD10 [JADRHE]
10606
10683
+
Asp
GTC
[ENA]
¡û
>W2110375954
JADRHE010000074
Fusobacteriota
Fusobacterium sp. DD10 [JADRHE]
3262
3339
+
Asp
GTC
[ENA]
¡û
>W2110375965
JADRHE010000074
Fusobacteriota
Fusobacterium sp. DD10 [JADRHE]
4240
4317
+
Asp
GTC
[ENA]
¡û
>W2110376145
JADRHI010000023
Fusobacteriota
Fusobacterium sp. DD6 [JADRHI]
25144
25067
-
Asp
GTC
[ENA]
¡û
>W2110376169
JADRHI010000069
Fusobacteriota
Fusobacterium sp. DD6 [JADRHI]
10605
10682
+
Asp
GTC
[ENA]
¡û
>W2110376182
JADRHI010000075
Fusobacteriota
Fusobacterium sp. DD6 [JADRHI]
8885
8808
-
Asp
GTC
[ENA]
¡û
>W2110376193
JADRHI010000075
Fusobacteriota
Fusobacterium sp. DD6 [JADRHI]
7907
7830
-
Asp
GTC
[ENA]
¡û
>W2110376252
JADRHK010000022
Fusobacteriota
Fusobacterium sp. DD4 [JADRHK]
25143
25066
-
Asp
GTC
[ENA]
¡û
>W2110376276
JADRHK010000069
Fusobacteriota
Fusobacterium sp. DD4 [JADRHK]
2097
2020
-
Asp
GTC
[ENA]
¡û
>W2110376289
JADRHK010000075
Fusobacteriota
Fusobacterium sp. DD4 [JADRHK]
8885
8808
-
Asp
GTC
[ENA]
¡û
>W2110376300
JADRHK010000075
Fusobacteriota
Fusobacterium sp. DD4 [JADRHK]
7907
7830
-
Asp
GTC
[ENA]
¡û
>W2110376315
JADRHL010000023
Fusobacteriota
Fusobacterium sp. DD3 [JADRHL]
25144
25067
-
Asp
GTC
[ENA]
¡û
>W2110376339
JADRHL010000069
Fusobacteriota
Fusobacterium sp. DD3 [JADRHL]
10605
10682
+
Asp
GTC
[ENA]
¡û
>W2110376352
JADRHL010000075
Fusobacteriota
Fusobacterium sp. DD3 [JADRHL]
8885
8808
-
Asp
GTC
[ENA]
¡û
>W2110376363
JADRHL010000075
Fusobacteriota
Fusobacterium sp. DD3 [JADRHL]
7907
7830
-
Asp
GTC
[ENA]
¡û
>W2110376378
JADRHM010000023
Fusobacteriota
Fusobacterium sp. DD2 [JADRHM]
7408
7485
+
Asp
GTC
[ENA]
¡û
>W2110376402
JADRHM010000068
Fusobacteriota
Fusobacterium sp. DD2 [JADRHM]
2095
2018
-
Asp
GTC
[ENA]
¡û
>W2110376415
JADRHM010000072
Fusobacteriota
Fusobacterium sp. DD2 [JADRHM]
3262
3339
+
Asp
GTC
[ENA]
¡û
>W2110376426
JADRHM010000072
Fusobacteriota
Fusobacterium sp. DD2 [JADRHM]
4240
4317
+
Asp
GTC
[ENA]
¡û
>W2110376438
JADRHN010000021
Fusobacteriota
Fusobacterium sp. DD1 [JADRHN]
25145
25068
-
Asp
GTC
[ENA]
¡û
>W2110376462
JADRHN010000068
Fusobacteriota
Fusobacterium sp. DD1 [JADRHN]
2095
2018
-
Asp
GTC
[ENA]
¡û
>W2110376475
JADRHN010000073
Fusobacteriota
Fusobacterium sp. DD1 [JADRHN]
8885
8808
-
Asp
GTC
[ENA]
¡û
>W2110376486
JADRHN010000073
Fusobacteriota
Fusobacterium sp. DD1 [JADRHN]
7907
7830
-
Asp
GTC
[ENA]
¡û
>C211136169
CP060637
Fusobacteriota
Fusobacterium sp. NSJ-57 [CP060637]
1702040
1702117
+
Asp
GTC
-
¡û
>C211136188
CP060637
Fusobacteriota
Fusobacterium sp. NSJ-57 [CP060637]
1786247
1786324
+
Asp
GTC
-
¡û
>C211136199
CP060637
Fusobacteriota
Fusobacterium sp. NSJ-57 [CP060637]
1787219
1787296
+
Asp
GTC
-
¡û
>C211136220
CP060637
Fusobacteriota
Fusobacterium sp. NSJ-57 [CP060637]
961415
961338
-
Asp
GTC
-
¡û
>W2130023664
JADRFV010000065
Fusobacteriota
Fusobacterium sp. DD45 [JADRFV]
2090
2013
-
Asp
GTC
[ENA]
¡û
>W2130023672
JADRFV010000082
Fusobacteriota
Fusobacterium sp. DD45 [JADRFV]
382
305
-
Asp
GTC
[ENA]
¡û
>W2130023688
JADRFV010000103
Fusobacteriota
Fusobacterium sp. DD45 [JADRFV]
3262
3339
+
Asp
GTC
[ENA]
¡û
>W2130023699
JADRFV010000103
Fusobacteriota
Fusobacterium sp. DD45 [JADRFV]
4240
4317
+
Asp
GTC
[ENA]
¡û
>W2130023759
JADRGM010000067
Fusobacteriota
Fusobacterium sp. DD28 [JADRGM]
10606
10683
+
Asp
GTC
[ENA]
¡û
>W2130023768
JADRGM010000087
Fusobacteriota
Fusobacterium sp. DD28 [JADRGM]
7472
7549
+
Asp
GTC
[ENA]
¡û
>W2130023784
JADRGM010000107
Fusobacteriota
Fusobacterium sp. DD28 [JADRGM]
3262
3339
+
Asp
GTC
[ENA]
¡û
>W2130023795
JADRGM010000107
Fusobacteriota
Fusobacterium sp. DD28 [JADRGM]
4240
4317
+
Asp
GTC
[ENA]
¡û
>W2130023803
JADRGO010000067
Fusobacteriota
Fusobacterium sp. DD26 [JADRGO]
2090
2013
-
Asp
GTC
[ENA]
¡û
>W2130023812
JADRGO010000088
Fusobacteriota
Fusobacterium sp. DD26 [JADRGO]
7471
7548
+
Asp
GTC
[ENA]
¡û
>W2130023828
JADRGO010000109
Fusobacteriota
Fusobacterium sp. DD26 [JADRGO]
1747
1670
-
Asp
GTC
[ENA]
¡û
>W2130023839
JADRGO010000109
Fusobacteriota
Fusobacterium sp. DD26 [JADRGO]
769
692
-
Asp
GTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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