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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.273854 (5 seq.)
>W2030041855
SNYV01000017
Bacteroidota
Sphingobacterium yanglingense DSM 28353 [SNYV]
259068
258993
-
Val
GAC
[ENA]
¡û
>W2130027056
JAEQMU010000008
Bacteroidota
Sphingobacterium tabacisoli h337 [JAEQMU]
146
71
-
Val
GAC
[ENA]
¡û
>W2130027638
JAERTY010000010
Bacteroidota
Sphingobacterium sp. C459-1T [JAERTY]
275141
275066
-
Val
GAC
[ENA]
¡û
>W133004197
ATDL01000007
Bacteroidota
Sphingobacterium paucimobilis 1398 [ATDL]
207469
207546
+
Val
GAC
[ENA]
¡û
>W133004199
ATDL01000021
Bacteroidota
Sphingobacterium paucimobilis 1398 [ATDL]
281798
281875
+
Val
GAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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