This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.273870 (11 seq.)
>W1930034057
OCMF01000003
Bacteroidota
Salinimicrobium sediminis CGMCC 1.12641 [OCMF]
19639
19714
+
Val
GAC
[ENA]
¡û
>W2030012688
JAAVJQ010000008
Bacteroidota
Salinimicrobium sp. CDJ15-81-2 [JAAVJQ]
165987
165912
-
Val
GAC
[ENA]
¡û
>W2030012691
JAAVJR010000009
Bacteroidota
Salinimicrobium sp. CDJ15-91 [JAAVJR]
21767
21842
+
Val
GAC
[ENA]
¡û
>W2030029286
OCMF01000003
Bacteroidota
Salinimicrobium sediminis CGMCC 1.12641 [OCMF]
19639
19714
+
Val
GAC
[ENA]
¡û
>C233001954
CP069620
Bacteroidota
Salinimicrobium sp. HN-2-9-2 [CP069620]
2219934
2220009
+
Val
GAC
-
¡û
>C233004454
CP091036
Bacteroidota
Antarcticibacterium sp. 1MA-6-2 [CP091036]
2385800
2385725
-
Val
GAC
-
¡û
>W2130002301
BMXB01000009
Bacteroidota
Salinimicrobium marinum KCTC 12719 [BMXB]
13572
13647
+
Val
GAC
[ENA]
¡û
>W1730008697
FNGG01000005
Bacteroidota
Salinimicrobium catena [FNGG]
73118
73043
-
Val
GAC
[ENA]
¡û
>W1730009153
FNUG01000005
Bacteroidota
Salinimicrobium catena [FNUG]
91443
91518
+
Val
GAC
[ENA]
¡û
>W133004780
AUIG01000037
Bacteroidota
Salinimicrobium xinjiangense DSM 19287 [AUIG]
9251
9328
+
Val
GAC
[ENA]
¡û
>W133004864
AUKI01000018
Bacteroidota
Salinimicrobium terrae DSM 17865 [AUKI]
18412
18487
+
Val
GAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK