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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.273942 (7 seq.)
>W1711417553
MHGB01000007
Unclassified
Omnitrophica WOR_2 bacterium GWB2_45_9 [MHGB]
14398
14473
+
Gly
GCC
[ENA]
¡û
>W1711417578
MHGC01000057
Unclassified
Omnitrophica WOR_2 bacterium GWC2_44_8 [MHGC]
18002
18074
+
Gly
GCC
[ENA]
¡û
>W1711417895
MHHH01000011
Unclassified
Omnitrophica WOR_2 bacterium RIFOXYA2_FULL_45_12 [MHHH]
10363
10288
-
Gly
GCC
[ENA]
¡û
>W1711417955
MHHJ01000004
Unclassified
Omnitrophica WOR_2 bacterium RIFOXYB2_FULL_45_11 [MHHJ]
5173
5248
+
Gly
GCC
[ENA]
¡û
>W1711418025
MHHL01000042
Unclassified
Omnitrophica WOR_2 bacterium RIFOXYC2_FULL_43_9 [MHHL]
6228
6300
+
Gly
GCC
[ENA]
¡û
>W1711418063
MHHM01000112
Unclassified
Omnitrophica WOR_2 bacterium RIFOXYC2_FULL_45_15 [MHHM]
13940
14015
+
Gly
GCC
[ENA]
¡û
>W2010866095
MHHA01000011
Unclassified
Omnitrophica WOR_2 bacterium RIFCSPLOWO2_12_FULL_46_30 [MHHA]
7389
7461
+
Gly
GCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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