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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.274003 (4 seq.)
>W2010434204
JAAAHR010000089
Actinomycetota
Nonomuraea sp. K271 [JAAAHR]
29212
29287
+
Arg
ACG
[ENA]
¡û
>W2011635373
SMJZ01000102
Actinomycetota
Nonomuraea sp. KC201 [SMJZ]
14084
14159
+
Arg
ACG
[ENA]
¡û
>W2011636973
SMLD01000007
Actinomycetota
Nonomuraea sp. 6K102 [SMLD]
69932
70007
+
Arg
ACG
[ENA]
¡û
>W2011967004
VBUN01000083
Actinomycetota
Nonomuraea sp. KC401 [VBUN]
7242
7167
-
Arg
ACG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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