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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.274628 (7 seq.)
>W1711419328
MHPH01000005
Unclassified
Candidatus Staskawiczbacteria bacterium RIFOXYA2_FULL_32_7 [MHPH]
14401
14324
-
Glu
TTC
[ENA]
¡û
>W1711419375
MHPI01000048
Unclassified
Candidatus Staskawiczbacteria bacterium RIFOXYB1_FULL_32_11 [MHPI]
29568
29491
-
Glu
TTC
[ENA]
¡û
>W1711419470
MHPL01000045
Unclassified
Candidatus Staskawiczbacteria bacterium RIFOXYB2_FULL_32_9 [MHPL]
12000
11923
-
Glu
TTC
[ENA]
¡û
>W1711419653
MHPR01000049
Unclassified
Candidatus Staskawiczbacteria bacterium RIFOXYC2_FULL_32_10 [MHPR]
7088
7011
-
Glu
TTC
[ENA]
¡û
>W1711419741
MHPU01000042
Unclassified
Candidatus Staskawiczbacteria bacterium RIFOXYD1_FULL_32_13 [MHPU]
33320
33243
-
Glu
TTC
[ENA]
¡û
>W2110083083
CAINMG010000023
Unclassified
Candidatus Staskawiczbacteria bacterium [CAINMG]
5321
5396
+
Glu
TTC
[ENA]
¡û
>W1511596523
LBOJ01000009
Unclassified
Parcubacteria group bacterium GW2011_GWC2_32_10 GW2011_GWC2_32_10 [LBOJ]
13681
13758
+
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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