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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.274635 (7 seq.)
>W2110080017
CAIJOQ010000051
Unclassified
candidate division WOR-3 bacterium [CAIJOQ]
129950
130026
+
Glu
CTC
[ENA]
¡û
>W2110084587
CAIPLT010000002
Unclassified
candidate division WOR-3 bacterium [CAIPLT]
60428
60504
+
Glu
CTC
[ENA]
¡û
>W2110086423
CAISFH010000004
Unclassified
candidate division WOR-3 bacterium [CAISFH]
129871
129947
+
Glu
CTC
[ENA]
¡û
>W2110086775
CAISUA010000345
Unclassified
candidate division WOR-3 bacterium [CAISUA]
10468
10392
-
Glu
CTC
[ENA]
¡û
>W2110087021
CAITFA010000008
Unclassified
candidate division WOR-3 bacterium [CAITFA]
4465
4541
+
Glu
CTC
[ENA]
¡û
>W2110087817
CAIUCQ010000049
Unclassified
candidate division WOR-3 bacterium [CAIUCQ]
89730
89806
+
Glu
CTC
[ENA]
¡û
>W2110089312
CAIWXC010000135
Unclassified
candidate division WOR-3 bacterium [CAIWXC]
9440
9364
-
Glu
CTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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