This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.275185 (6 seq.)
>W131177695
ARKZ01000026
Bacteroidota
Proteiniphilum acetatigenes DSM 18083 [ARKZ]
92188
92113
-
Val
GAC
[ENA]
¡û
>W1711502972
MKTE01000064
Bacteroidota
Bacteroidia bacterium 44-10 [MKTE]
77789
77864
+
Val
GAC
[ENA]
¡û
>C171129214
LT605205
Bacteroidota
Proteiniphilum saccharofermentans M3/6 [LT605205]
2239516
2239441
-
Val
GAC
-
¡û
>W1710533125
FNQW01000036
Bacteroidota
Porphyromonadaceae bacterium KH3R12 [FNQW]
16875
16950
+
Val
GAC
[ENA]
¡û
>W1710567502
FOSU01000006
Bacteroidota
Porphyromonadaceae bacterium KH3CP3RA [FOSU]
68127
68202
+
Val
GAC
[ENA]
¡û
>W1710576002
FOZR01000003
Bacteroidota
Porphyromonadaceae bacterium NLAE-zl-C104 [FOZR]
16899
16974
+
Val
GAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK