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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.275457 (5 seq.)
>W1711417621
MHGE01000017
Unclassified
Omnitrophica WOR_2 bacterium GWF2_38_59 [MHGE]
45901
45824
-
Asp
GTC
[ENA]
¡û
>W1711417811
MHHF01000014
Unclassified
Omnitrophica WOR_2 bacterium RIFOXYA12_FULL_38_10 [MHHF]
14607
14684
+
Asp
GTC
[ENA]
¡û
>W1711417852
MHHG01000018
Unclassified
Omnitrophica WOR_2 bacterium RIFOXYA2_FULL_38_17 [MHHG]
13147
13224
+
Asp
GTC
[ENA]
¡û
>W1711417918
MHHI01000021
Unclassified
Omnitrophica WOR_2 bacterium RIFOXYB2_FULL_38_16 [MHHI]
9040
9117
+
Asp
GTC
[ENA]
¡û
>W1711418012
MHHK01000085
Unclassified
Omnitrophica WOR_2 bacterium RIFOXYC2_FULL_38_12 [MHHK]
17624
17701
+
Asp
GTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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