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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.275494 (19 seq.)
>W1711352248
MDDB01000001
Bacillota
Moorella thermoacetica [MDDB]
208511
208588
+
Pro
TGG
[ENA]
¡û
>W1711352350
MDDD01000001
Bacillota
Moorella thermoacetica [MDDD]
208093
208170
+
Pro
TGG
[ENA]
¡û
>W1711352428
MDDE01000004
Bacillota
Moorella thermoacetica [MDDE]
57735
57812
+
Pro
TGG
[ENA]
¡û
>W1711428544
MIHH01000004
Bacillota
Moorella thermoacetica [MIHH]
114305
114228
-
Pro
TGG
[ENA]
¡û
>W1711428568
MIIF01000001
Bacillota
Moorella thermoacetica [MIIF]
252924
253001
+
Pro
TGG
[ENA]
¡û
>C171055190
CP017019
Bacillota
Moorella thermoacetica DSM 103132 [CP017019]
1433168
1433245
+
Pro
TGG
-
¡û
>C171058956
CP017237
Bacillota
Moorella thermoacetica DSM 103284 [CP017237]
1193464
1193541
+
Pro
TGG
-
¡û
>C014175
CP000232
Bacillota
Moorella thermoacetica [CP000232]
1250938
1251015
+
Pro
TGG
[Ensembl]
¡û
>W141229817
BARR01000042
Bacillota
Moorella thermoacetica Y72 [BARR]
231120
231197
+
Pro
TGG
[ENA]
¡û
>C191073432
CP031054
Bacillota
Moorella thermoacetica 39073-HH [CP031054]
1255178
1255255
+
Pro
TGG
-
¡û
>W09100921
AADT03000005
Bacillota
Moorella thermoacetica ATCC 39073 [AADT]
56439
56362
-
Pro
TGG
[ENA]
¡û
>C151094360
CP012369
Bacillota
Moorella thermoacetica DSM 521 [CP012369]
1145667
1145744
+
Pro
TGG
-
¡û
>C151094411
CP012370
Bacillota
Moorella thermoacetica DSM 2955 [CP012370]
1245200
1245277
+
Pro
TGG
-
¡û
>W2011971796
VCDV01000001
Bacillota
Moorella thermoacetica ATCC 31490 [VCDV]
208513
208590
+
Pro
TGG
[ENA]
¡û
>W2011971846
VCDW01000001
Bacillota
Moorella thermoacetica ATCC 35608 [VCDW]
208506
208583
+
Pro
TGG
[ENA]
¡û
>W2011971901
VCDX01000002
Bacillota
Moorella thermoacetica ATCC 33924 [VCDX]
85205
85282
+
Pro
TGG
[ENA]
¡û
>W2011971958
VCDY01000001
Bacillota
Moorella thermoacetica ATCC 49707 [VCDY]
398514
398437
-
Pro
TGG
[ENA]
¡û
>W2012096634
VNHL01000001
Bacillota
Moorella thermoacetica ATCC 39073 [VNHL]
1763780
1763703
-
Pro
TGG
[ENA]
¡û
>W2310021024
BSDM01000001
Bacillota
Moorella thermoacetica G-20 [BSDM]
398510
398433
-
Pro
TGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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