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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.275613 (15 seq.)
>W1711007485
LQPE01000145
Actinomycetota
Mycobacterium kyorinense [LQPE]
6208
6131
-
Thr
CGT
[ENA]
¡û
>W1711772519
MVHL01000043
Actinomycetota
Mycobacterium bouchedurhonense [MVHL]
39504
39581
+
Thr
CGT
[ENA]
¡û
>W1711773735
MVIL01000181
Actinomycetota
Mycobacterium timonense [MVIL]
3461
3384
-
Thr
CGT
[ENA]
¡û
>W1910598865
LBGZ01000006
Actinomycetota
Mycobacterium avium subsp. hominissuis OCU466 [LBGZ]
35159
35234
+
Thr
CGT
[ENA]
¡û
>W1910658357
MBFQ01000039
Actinomycetota
Mycobacterium avium subsp. hominissuis OCU462 [MBFQ]
14151
14226
+
Thr
CGT
[ENA]
¡û
>W2010769664
LBGZ01000006
Actinomycetota
Mycobacterium avium subsp. hominissuis OCU466 [LBGZ]
35159
35234
+
Thr
CGT
[ENA]
¡û
>W2010804988
MBFQ01000039
Actinomycetota
Mycobacterium avium subsp. hominissuis OCU462 [MBFQ]
14151
14226
+
Thr
CGT
[ENA]
¡û
>W1710085457
BDNJ01000010
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDNJ]
15655
15578
-
Thr
CGT
[ENA]
¡û
>W1710085682
BDNN01000165
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDNN]
4015
4092
+
Thr
CGT
[ENA]
¡û
>W1710086138
BDNW01000333
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDNW]
2546
2623
+
Thr
CGT
[ENA]
¡û
>W1710086306
BDOA01000088
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOA]
5944
6021
+
Thr
CGT
[ENA]
¡û
>W1710086479
BDOD01000060
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOD]
12410
12333
-
Thr
CGT
[ENA]
¡û
>W1710086594
BDOF01000075
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOF]
5450
5527
+
Thr
CGT
[ENA]
¡û
>W1710086765
BDOJ01000028
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOJ]
20492
20569
+
Thr
CGT
[ENA]
¡û
>W1710086932
BDOM01000007
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOM]
147
70
-
Thr
CGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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