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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.275732 (7 seq.)
>W1710926993
LOEW01000132
Bacillota
Desulfosporosinus sp. BRH_c37 [LOEW]
606
683
+
Arg
CCT
[ENA]
¡û
>W1511187109
JMGA01000022
Bacillota
Desulfosporosinus sp. HMP52 [JMGA]
75921
75998
+
Arg
CCT
[ENA]
¡û
>W1511430036
JUEE01000046
Bacillota
Desulfosporosinus sp. BICA1-9 [JUEE]
41213
41136
-
Arg
CCT
[ENA]
¡û
>W11181346
AGJA01000012
Bacillota
Desulfosporosinus meridiei DSM 13257 [AGJA]
59979
60056
+
Arg
CCT
[ENA]
¡û
>C121014761
CP003629
Bacillota
Desulfosporosinus meridiei DSM 13257 [CP003629]
12931
13008
+
Arg
CCT
[Ensembl]
¡û
>W1610784535
LOEW01000132
Bacillota
Desulfosporosinus sp. BRH_c37 [LOEW]
606
683
+
Arg
CCT
[ENA]
¡û
>W1710516463
FNCP01000006
Bacillota
Desulfosporosinus hippei DSM 8344 [FNCP]
77854
77777
-
Arg
CCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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