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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.275982 (7 seq.)
>CHL1810000451
AP012265
Viridiplantae
Cephalotaxus wilsoniana (AP012265)
77155
77080
-
His
GTG
[ENA]
¡û
>CHL1810000583
AP014574
Viridiplantae
Amentotaxus formosana (AP014574)
135925
135850
-
His
GTG
[ENA]
¡û
>CHL1810005150
JN867586
Viridiplantae
Taxus mairei (JN867586)
76
1
-
His
GTG
[ENA]
¡û
>CHL1810006769
KC136217
Viridiplantae
Cephalotaxus oliveri (KC136217)
76618
76543
-
His
GTG
[ENA]
¡û
>CHL1810019096
KR476375
Viridiplantae
Taxus baccata (KR476375)
128133
128058
-
His
GTG
[ENA]
¡û
>CHL1810019341
KR780582
Viridiplantae
Amentotaxus argotaenia (KR780582)
136165
136090
-
His
GTG
[ENA]
¡û
>CHL1810057377
MG385662
Viridiplantae
Cephalotaxus sinensis (MG385662)
76958
76883
-
His
GTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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