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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.276973 (4 seq.)
>A173000080
CP002817
Thermoproteota
Sulfolobus acidocaldarius N8 [CP002817]
694096
694186
+
Glu
CTC
-
¡û
>A173000081
CP002818
Thermoproteota
Sulfolobus acidocaldarius Ron12/I [CP002818]
694100
694190
+
Glu
CTC
-
¡û
>A173000168
CP006977
Thermoproteota
Sulfolobus acidocaldarius SUSAZ [CP006977]
644174
644264
+
Glu
CTC
-
¡û
>At0431
CP000077
Thermoproteota
Sulfolobus acidocaldarius DSM 639 [CP000077]
694093
694183
+
Glu
CTC
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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