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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.277353 (8 seq.)
>W1910704789
MFCU01000012
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_44_29 [MFCU]
283878
283953
+
Met
CAT
[ENA]
¡û
>W1910705017
MFDD01000008
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_43_12 [MFDD]
43914
43839
-
Met
CAT
[ENA]
¡û
>W1910705166
MFDI01000028
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_12_FULL_47_45 [MFDI]
20794
20869
+
Met
CAT
[ENA]
¡û
>W1910705391
MFDR01000001
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_43_15 [MFDR]
43931
43856
-
Met
CAT
[ENA]
¡û
>W2010838215
MFCU01000012
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_44_29 [MFCU]
283878
283953
+
Ile2
CAT
[ENA]
¡û
>W2010838443
MFDD01000008
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_43_12 [MFDD]
43914
43839
-
Ile2
CAT
[ENA]
¡û
>W2010838592
MFDI01000028
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_12_FULL_47_45 [MFDI]
20794
20869
+
Ile2
CAT
[ENA]
¡û
>W2010838817
MFDR01000001
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_43_15 [MFDR]
43931
43856
-
Ile2
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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