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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.277479 (4 seq.)
>W1910733959
MHJF01000006
Unclassified
Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_02_FULL_40_20 [MHJF]
70715
70640
-
Asp
GTC
[ENA]
¡û
>W1910734198
MHJL01000036
Unclassified
Candidatus Harrisonbacteria bacterium RIFCSPLOWO2_02_FULL_41_13b [MHJL]
29490
29415
-
Asp
GTC
[ENA]
¡û
>W2010867389
MHJF01000006
Unclassified
Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_02_FULL_40_20 [MHJF]
70715
70640
-
Asp
GTC
[ENA]
¡û
>W2010867628
MHJL01000036
Unclassified
Candidatus Harrisonbacteria bacterium RIFCSPLOWO2_02_FULL_41_13b [MHJL]
29490
29415
-
Asp
GTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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