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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.277966 (5 seq.)
>WENV180925799
ODTL01000262
[ODTL] human metagenome; G_DNA_Stool
23703
23628
-
Arg
CCT
[ENA]
¡û
>WENV181366468
OFPS01004234
[OFPS] human gut metagenome; human gut
43
118
+
Arg
CCT
[ENA]
¡û
>WENV182109740
OHIN01004325
[OHIN] human gut metagenome; feces
2814
2889
+
Arg
CCT
[ENA]
¡û
>WENV182198413
OHPI01006671
[OHPI] human gut metagenome; feces
705
630
-
Arg
CCT
[ENA]
¡û
>WENV182253814
OHTA01037891
[OHTA] human gut metagenome; feces
385
310
-
Arg
CCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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