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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.279830 (6 seq.)
>W131222793
AUBO01000018
Thermodesulfobacteriota
Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 [AUBO]
64082
64007
-
Lys
CTT
[ENA]
¡û
>W131222830
AUBP01000001
Thermodesulfobacteriota
Desulfovibrio inopinatus DSM 10711 [AUBP]
477374
477299
-
Lys
CTT
[ENA]
¡û
>C141005267
CP006585
Thermodesulfobacteriota
Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 [CP006585]
2373792
2373867
+
Lys
CTT
[Ensembl]
¡û
>W2011276669
QMIE01000004
Thermodesulfobacteriota
Desulfovibrio indonesiensis P37SLT [QMIE]
55562
55637
+
Lys
CTT
[ENA]
¡û
>W2011276734
QMIF01000007
Thermodesulfobacteriota
Desulfovibrio marinus P48SEP [QMIF]
56074
55999
-
Lys
CTT
[ENA]
¡û
>C241048455
CP039543
Thermodesulfobacteriota
Oceanidesulfovibrio marinus CS1 [CP039543]
506470
506395
-
Lys
CTT
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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