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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.280003 (6 seq.)
>W1910760432
MNFZ01000046
Nitrososphaerota
Thaumarchaeota archaeon 13_1_40CM_3_38_6 [MNFZ]
5020
5095
+
Pro
TGG
[ENA]
¡û
>W1910760449
MNGX01000081
Nitrososphaerota
Thaumarchaeota archaeon 13_1_40CM_2_39_7 [MNGX]
3866
3791
-
Pro
TGG
[ENA]
¡û
>W1910760515
MNJU01000025
Nitrososphaerota
Thaumarchaeota archaeon 13_1_20CM_2_38_5 [MNJU]
1560
1635
+
Pro
TGG
[ENA]
¡û
>W2010887277
MNFZ01000046
Nitrososphaerota
Thaumarchaeota archaeon 13_1_40CM_3_38_6 [MNFZ]
5020
5095
+
Pro
TGG
[ENA]
¡û
>W2010887294
MNGX01000081
Nitrososphaerota
Thaumarchaeota archaeon 13_1_40CM_2_39_7 [MNGX]
3866
3791
-
Pro
TGG
[ENA]
¡û
>W2010887360
MNJU01000025
Nitrososphaerota
Thaumarchaeota archaeon 13_1_20CM_2_38_5 [MNJU]
1560
1635
+
Pro
TGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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