This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.280997 (5 seq.)
>WENV180256765
OBEQ010850321
[OBEQ] groundwater metagenome; groundwater
631
708
+
Pro
CGG
[ENA]
¡û
>WENV183669094
ORJL010808132
[ORJL] groundwater metagenome; groundwater
938
861
-
Pro
CGG
[ENA]
¡û
>WENV183682244
ORMF010414766
[ORMF] groundwater metagenome; groundwater
18941
18864
-
Pro
CGG
[ENA]
¡û
>WENV183685182
ORMF010817245
[ORMF] groundwater metagenome; groundwater
87
10
-
Pro
CGG
[ENA]
¡û
>WENV170558905
CXWL01098952
[CXWL] groundwater metagenome; biofilm material
1365
1442
+
Pro
CGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK