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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.283738 (221 seq.)
>W1710782897
LJFJ01000006
Bacillota
Limosilactobacillus fermentum [LJFJ]
75639
75713
+
Thr
CGT
[ENA]
¡û
>W1710801553
LJWZ01000011
Bacillota
Limosilactobacillus fermentum [LJWZ]
224
298
+
Thr
CGT
[ENA]
¡û
>W1711260684
LYWI01000029
Bacillota
Limosilactobacillus reuteri [LYWI]
3010
2936
-
Thr
CGT
[ENA]
¡û
>W1711329138
MBLR01000152
Bacillota
Limosilactobacillus reuteri [MBLR]
65
139
+
Thr
CGT
[ENA]
¡û
>W1711345266
MCNS01000007
Bacillota
Limosilactobacillus reuteri [MCNS]
696
770
+
Thr
CGT
[ENA]
¡û
>W1711487637
MKGE01000056
Bacillota
Limosilactobacillus fermentum [MKGE]
2974
2900
-
Thr
CGT
[ENA]
¡û
>W1711767308
MUZP01000071
Bacillota
Limosilactobacillus reuteri [MUZP]
865
791
-
Thr
CGT
[ENA]
¡û
>W1711790887
MWIJ01000013
Bacillota
Limosilactobacillus reuteri [MWIJ]
249
323
+
Thr
CGT
[ENA]
¡û
>W1711942396
NBBD01000050
Bacillota
Limosilactobacillus reuteri [NBBD]
2739
2665
-
Thr
CGT
[ENA]
¡û
>W1711942444
NBBE01000082
Bacillota
Limosilactobacillus reuteri [NBBE]
371
445
+
Thr
CGT
[ENA]
¡û
>W1711942485
NBBF01000033
Bacillota
Limosilactobacillus reuteri [NBBF]
20750
20676
-
Thr
CGT
[ENA]
¡û
>W1712036497
NFHN01000063
Bacillota
Limosilactobacillus reuteri [NFHN]
11659
11585
-
Thr
CGT
[ENA]
¡û
>W1712041153
NFKV01000085
Bacillota
Limosilactobacillus reuteri [NFKV]
919
845
-
Thr
CGT
[ENA]
¡û
>W1712106939
NIWV01000064
Bacillota
Limosilactobacillus fermentum [NIWV]
6456
6382
-
Thr
CGT
[ENA]
¡û
>C171057890
CP017151
Bacillota
Limosilactobacillus fermentum NCC2970 [CP017151]
1184013
1184087
+
Thr
CGT
-
¡û
>C171088293
CP019030
Bacillota
Limosilactobacillus fermentum SNUV175 [CP019030]
739274
739200
-
Thr
CGT
-
¡û
>C171115616
CP021104
Bacillota
Limosilactobacillus fermentum FTDC 8312 [CP021104]
308182
308256
+
Thr
CGT
-
¡û
>C171123294
CP021790
Bacillota
Limosilactobacillus fermentum LAC FRN-92 [CP021790]
1949953
1949879
-
Thr
CGT
-
¡û
>C012537
CP000705
Bacillota
Limosilactobacillus reuteri subsp. reuteri DSM 20016 [CP000705]
317408
317480
+
Thr
CGT
[Ensembl]
¡û
>w015046
AAOV01000059
Bacillota
Limosilactobacillus reuteri JCM 1112 [AAOV]
5200
5277
+
Thr
CGT
[ENA]
¡û
>WENV180152536
OAUQ01006135
[OAUQ] human gut metagenome; faeces
2200
2126
-
Thr
CGT
[ENA]
¢þ
>WENV180195962
OAZZ01007912
[OAZZ] human gut metagenome; faeces
650
575
-
Thr
CGT
[ENA]
¢þ
>WENV180334962
OBLF01109626
[OBLF] metagenome; feces
262
188
-
Thr
CGT
[ENA]
¢þ
>WENV180410800
OBUX01007036
[OBUX] human gut metagenome; faeces
691
618
-
Thr
CGT
[ENA]
¢þ
>WENV180440806
OBWV01002298
[OBWV] human gut metagenome; faeces
5171
5097
-
Thr
CGT
[ENA]
¢þ
>WENV180441853
OBWW01002182
[OBWW] human gut metagenome; faeces
6218
6145
-
Thr
CGT
[ENA]
¢þ
>WENV180468450
OBYJ01021877
[OBYJ] human gut metagenome; faeces
231
157
-
Thr
CGT
[ENA]
¢þ
>WENV180547827
OCIU01120369
[OCIU] human gut metagenome; human gut
273
346
+
Thr
CGT
[ENA]
¢þ
>WENV180576632
OCLZ01030039
[OCLZ] human gut metagenome; human gut
327
253
-
Thr
CGT
[ENA]
¢þ
>W141092468
AVAB01000001
Bacillota
Limosilactobacillus fermentum MTCC 8711 [AVAB]
278896
278970
+
Thr
CGT
[ENA]
¡û
>WENV181242180
OFFF01064278
[OFFF] mouse gut metagenome; faeces
96
170
+
Thr
CGT
[ENA]
¢þ
>WENV181247257
OFFK01012259
[OFFK] mouse gut metagenome; faeces
3243
3169
-
Thr
CGT
[ENA]
¢þ
>WENV181253367
OFFQ01005040
[OFFQ] mouse gut metagenome; faeces
5318
5244
-
Thr
CGT
[ENA]
¢þ
>WENV181258479
OFFV01000405
[OFFV] mouse gut metagenome; faeces
96
170
+
Thr
CGT
[ENA]
¢þ
>WENV181262490
OFFY01006470
[OFFY] mouse gut metagenome; faeces
5318
5244
-
Thr
CGT
[ENA]
¢þ
>WENV181263909
OFFZ01035413
[OFFZ] mouse gut metagenome; faeces
608
534
-
Thr
CGT
[ENA]
¢þ
>WENV181270268
OFGE01079885
[OFGE] mouse gut metagenome; faeces
96
170
+
Thr
CGT
[ENA]
¢þ
>WENV181272222
OFGG01004751
[OFGG] mouse gut metagenome; faeces
793
867
+
Thr
CGT
[ENA]
¢þ
>WENV181273664
OFGH01005905
[OFGH] mouse gut metagenome; faeces
4999
4925
-
Thr
CGT
[ENA]
¢þ
>WENV181282703
OFGP01064620
[OFGP] mouse gut metagenome; faeces
96
170
+
Thr
CGT
[ENA]
¢þ
>WENV181285277
OFGR01085986
[OFGR] mouse gut metagenome; faeces
96
170
+
Thr
CGT
[ENA]
¢þ
>WENV181287912
OFGX01083167
[OFGX] mouse gut metagenome; faeces
434
360
-
Thr
CGT
[ENA]
¢þ
>WENV181290614
OFHA01080103
[OFHA] mouse gut metagenome; faeces
96
170
+
Thr
CGT
[ENA]
¢þ
>WENV181299345
OFHM01006210
[OFHM] mouse gut metagenome; faeces
96
170
+
Thr
CGT
[ENA]
¢þ
>WENV181301286
OFHN01082210
[OFHN] mouse gut metagenome; faeces
477
403
-
Thr
CGT
[ENA]
¢þ
>WENV181302676
OFHO01079413
[OFHO] mouse gut metagenome; faeces
96
170
+
Thr
CGT
[ENA]
¢þ
>WENV181457208
OGEH01021575
[OGEH] metagenome; Human gut stool
590
516
-
Thr
CGT
[ENA]
¢þ
>WENV181465260
OGEP01014783
[OGEP] metagenome; Human gut stool
2249
2175
-
Thr
CGT
[ENA]
¢þ
>WENV181467885
OGES01000044
[OGES] metagenome; Human gut stool
114702
114628
-
Thr
CGT
[ENA]
¢þ
>WENV181469123
OGES01060298
[OGES] metagenome; Human gut stool
2
76
+
Thr
CGT
[ENA]
¢þ
>WENV181474169
OGFC01002479
[OGFC] metagenome; Human gut stool
83
157
+
Thr
CGT
[ENA]
¢þ
>WENV181474448
OGFC01024857
[OGFC] metagenome; Human gut stool
629
555
-
Thr
CGT
[ENA]
¢þ
>WENV181481575
OGFI01007107
[OGFI] metagenome; Human gut stool
1985
1911
-
Thr
CGT
[ENA]
¢þ
>W141148176
AWXS01000029
Bacillota
Limosilactobacillus fermentum Lf1 [AWXS]
63090
63164
+
Thr
CGT
[ENA]
¡û
>WENV181501989
OGGI01003229
[OGGI] metagenome; Human gut stool
8373
8299
-
Thr
CGT
[ENA]
¢þ
>WENV181506524
OGGM01009886
[OGGM] metagenome; Human gut stool
629
555
-
Thr
CGT
[ENA]
¢þ
>WENV181517249
OGGZ01003495
[OGGZ] metagenome; Human gut stool
9008
8934
-
Thr
CGT
[ENA]
¢þ
>WENV181519173
OGHB01013371
[OGHB] metagenome; Human gut stool
535
609
+
Thr
CGT
[ENA]
¢þ
>WENV181537081
OGHW01001961
[OGHW] metagenome; Human gut stool
614
688
+
Thr
CGT
[ENA]
¢þ
>WENV181550559
OGIM01013089
[OGIM] metagenome; Human gut stool
225
151
-
Thr
CGT
[ENA]
¢þ
>WENV181552994
OGIQ01000479
[OGIQ] metagenome; Human gut stool
10700
10626
-
Thr
CGT
[ENA]
¢þ
>WENV181555632
OGIU01000004
[OGIU] metagenome; Human gut stool
183553
183479
-
Thr
CGT
[ENA]
¢þ
>WENV181556241
OGIU01006032
[OGIU] metagenome; Human gut stool
180
254
+
Thr
CGT
[ENA]
¢þ
>WENV181556733
OGIV01000194
[OGIV] metagenome; Human gut stool
83
157
+
Thr
CGT
[ENA]
¢þ
>WENV181558476
OGIX01001027
[OGIX] metagenome; Human gut stool
537
611
+
Thr
CGT
[ENA]
¢þ
>WENV181570728
OGJO01000004
[OGJO] metagenome; Human gut stool
83
157
+
Thr
CGT
[ENA]
¢þ
>WENV181574666
OGJT01002658
[OGJT] metagenome; Human gut stool
83
157
+
Thr
CGT
[ENA]
¢þ
>WENV181588182
OGKH01001189
[OGKH] metagenome; Human gut stool
83
157
+
Thr
CGT
[ENA]
¢þ
>WENV181588318
OGKH01011829
[OGKH] metagenome; Human gut stool
629
555
-
Thr
CGT
[ENA]
¢þ
>WENV181588658
OGKJ01000392
[OGKJ] metagenome; Human gut stool
4592
4666
+
Thr
CGT
[ENA]
¢þ
>WENV181590023
OGKM01001786
[OGKM] metagenome; Human gut stool
104
178
+
Thr
CGT
[ENA]
¢þ
>WENV181671306
OGON01000714
[OGON] human gut metagenome; faeces
25393
25319
-
Thr
CGT
[ENA]
¢þ
>W141180737
AYHA01000027
Bacillota
Limosilactobacillus fermentum NB-22 [AYHA]
179
253
+
Thr
CGT
[ENA]
¡û
>WENV181896324
OGXS01000253
[OGXS] human gut metagenome; faeces
83
157
+
Thr
CGT
[ENA]
¢þ
>WENV181933613
OGYS01012932
[OGYS] human gut metagenome; faeces
536
609
+
Thr
CGT
[ENA]
¢þ
>WENV182208402
OHPX01008998
[OHPX] human gut metagenome; feces
1264
1190
-
Thr
CGT
[ENA]
¢þ
>W141244289
CAKF01000019
Bacillota
Limosilactobacillus ingluviei str. Autruche 4 [CAKF]
120423
120348
-
Thr
CGT
[ENA]
¡û
>C08006038
AP008937
Bacillota
Limosilactobacillus fermentum IFO 3956 [AP008937]
278689
278763
+
Thr
CGT
[Ensembl]
¡û
>C08006155
AP007281
Bacillota
Limosilactobacillus reuteri subsp. reuteri JCM 1112 [AP007281]
317230
317304
+
Thr
CGT
[Ensembl]
¡û
>WENV183166595
OLOY01000325
[OLOY] human gut metagenome; faeces
40754
40680
-
Thr
CGT
[ENA]
¢þ
>WENV183182100
OLPK01000005
[OLPK] human gut metagenome; faeces
504
578
+
Thr
CGT
[ENA]
¢þ
>WENV183205903
OLPZ01069510
[OLPZ] human gut metagenome; faeces
528
455
-
Thr
CGT
[ENA]
¢þ
>WENV183217717
OLQI01001419
[OLQI] human gut metagenome; faeces
734
807
+
Thr
CGT
[ENA]
¢þ
>WENV183263191
OLRR01000014
[OLRR] human gut metagenome; faeces
170
244
+
Thr
CGT
[ENA]
¢þ
>WENV183548348
OOAW01007572
[OOAW] human gut metagenome; human gut
1325
1399
+
Thr
CGT
[ENA]
¢þ
>WENV183555528
OOBN01004385
[OOBN] human gut metagenome; human gut
1223
1149
-
Thr
CGT
[ENA]
¢þ
>WENV183560956
OOBU01003172
[OOBU] human gut metagenome; human gut
165
239
+
Thr
CGT
[ENA]
¢þ
>WENV183606018
OODN01000273
[OODN] human gut metagenome; human gut
157
231
+
Thr
CGT
[ENA]
¢þ
>WENV183606578
OODN01016860
[OODN] human gut metagenome; human gut
231
305
+
Thr
CGT
[ENA]
¢þ
>WENV183723804
PDYJ01003493
[PDYJ] gut metagenome; fecal pellets
5168
5242
+
Thr
CGT
[ENA]
¢þ
>WENV183772406
PPYF01016848
[PPYF] human gut metagenome; stool from patient with Crohn's disease
41629
41555
-
Thr
CGT
[ENA]
¢þ
>WENV183781544
PPYF01197571
[PPYF] human gut metagenome; stool from patient with Crohn's disease
5390
5316
-
Thr
CGT
[ENA]
¢þ
>C181004011
AP017973
Bacillota
Limosilactobacillus fermentum MTCC 25067 [AP017973]
277568
277642
+
Thr
CGT
-
¡û
>C181054742
CP021964
Bacillota
Limosilactobacillus fermentum CBA7106 [CP021964]
283593
283667
+
Thr
CGT
-
¡û
>C181160189
CP027805
Bacillota
Limosilactobacillus reuteri WHH1689 [CP027805]
317500
317574
+
Thr
CGT
-
¡û
>C181181786
CP029613
Bacillota
Limosilactobacillus reuteri Byun-re-01 [CP029613]
646794
646868
+
Thr
CGT
-
¡û
>C181181962
CP029615
Bacillota
Limosilactobacillus reuteri SKKU-OGDONS-01 [CP029615]
966086
966012
-
Thr
CGT
-
¡û
>C181196715
CP031195
Bacillota
Limosilactobacillus fermentum LDTM 7301 [CP031195]
1831181
1831255
+
Thr
CGT
-
¡û
>W09122624
ACGI01000014
Bacillota
Limosilactobacillus fermentum ATCC 14931 [ACGI]
672
598
-
Thr
CGT
[ENA]
¡û
>W09123367
ACGW01000302
Bacillota
Limosilactobacillus reuteri SD2112 [ACGW]
124
198
+
Thr
CGT
[ENA]
¡û
>W09123392
ACGX01000074
Bacillota
Limosilactobacillus reuteri MM4-1A [ACGX]
389
315
-
Thr
CGT
[ENA]
¡û
>W09123890
ACHG01000098
Bacillota
Limosilactobacillus reuteri CF48-3A [ACHG]
123
197
+
Thr
CGT
[ENA]
¡û
>C181226915
LT906621
Bacillota
Limosilactobacillus fermentum IMDO 130101 [LT906621]
287683
287757
+
Thr
CGT
-
¡û
>W09127551
ACLB01000133
Bacillota
Limosilactobacillus reuteri MM2-3 [ACLB]
389
315
-
Thr
CGT
[ENA]
¡û
>C191012473
CP016803
Bacillota
Limosilactobacillus fermentum SK152 [CP016803]
930820
930746
-
Thr
CGT
-
¡û
>C191105224
CP033371
Bacillota
Limosilactobacillus fermentum DR9 [CP033371]
698496
698422
-
Thr
CGT
-
¡û
>C191119246
CP034099
Bacillota
Limosilactobacillus fermentum LMT2-75 [CP034099]
479922
479848
-
Thr
CGT
-
¡û
>C191121341
CP034193
Bacillota
Limosilactobacillus fermentum YL-11 [CP034193]
251192
251266
+
Thr
CGT
-
¡û
>C191134212
CP035054
Bacillota
Limosilactobacillus fermentum SRCM103285 [CP035054]
1871835
1871761
-
Thr
CGT
-
¡û
>C191134269
CP035055
Bacillota
Limosilactobacillus fermentum SRCM 103290 [CP035055]
1152764
1152690
-
Thr
CGT
-
¡û
>C191146467
CP035790
Bacillota
Limosilactobacillus reuteri ATG-F4 [CP035790]
1451980
1452054
+
Thr
CGT
-
¡û
>W141805369
JPKN01000272
Bacillota
Lacticaseibacillus paracasei casei [JPKN]
275
349
+
Thr
CGT
[ENA]
¡û
>W1910181296
BJLV01000124
Bacillota
Limosilactobacillus fermentum NBRC 3959 [BJLV]
735
661
-
Thr
CGT
[ENA]
¡û
>W1910340707
FTOY01000011
Bacillota
Limosilactobacillus caccae Marseille-P3519 [FTOY]
3380
3454
+
Thr
CGT
[ENA]
¡û
>C141005294
CP006603
Bacillota
Limosilactobacillus reuteri TD1 [CP006603]
351897
351971
+
Thr
CGT
[Ensembl]
¡û
>W1910910886
NHMT01000001
Bacillota
Limosilactobacillus reuteri I49 [NHMT]
808981
808907
-
Thr
CGT
[ENA]
¡û
>W1910954334
NJPQ01000086
Bacillota
Limosilactobacillus fermentum SHI-2 [NJPQ]
214
288
+
Thr
CGT
[ENA]
¡û
>W1911533720
OKQY01000097
Bacillota
Limosilactobacillus fermentum CECT 9269 [OKQY]
967
893
-
Thr
CGT
[ENA]
¡û
>W1911569312
PCYS01000005
Bacillota
Lactobacillus sp. UMNPBX18 [PCYS]
45210
45136
-
Thr
CGT
[ENA]
¡û
>W1911569637
PCYX01000123
Bacillota
Lactobacillus sp. UMNPBX13 [PCYX]
181
255
+
Thr
CGT
[ENA]
¡û
>W1911569907
PCZC01000076
Bacillota
Lactobacillus sp. UMNPBX7 [PCZC]
45388
45314
-
Thr
CGT
[ENA]
¡û
>W1911570169
PCZG01000159
Bacillota
Lactobacillus sp. UMNPBX3 [PCZG]
142
216
+
Thr
CGT
[ENA]
¡û
>W1911570380
PCZL01000142
Bacillota
Lactobacillus sp. UMNPBX10 [PCZL]
183
257
+
Thr
CGT
[ENA]
¡û
>W1911633692
PUXG01000017
Bacillota
Limosilactobacillus reuteri 2010 [PUXG]
5497
5423
-
Thr
CGT
[ENA]
¡û
>W1810059008
PDKX01000099
Bacillota
Limosilactobacillus fermentum NCDC 400 [PDKX]
3872
3946
+
Thr
CGT
[ENA]
¡û
>W1810084892
PESO01000091
Bacillota
Limosilactobacillus reuteri RC-14 [PESO]
308
382
+
Thr
CGT
[ENA]
¡û
>W1810090614
PGGE01000110
Bacillota
Limosilactobacillus fermentum 103 [PGGE]
251
325
+
Thr
CGT
[ENA]
¡û
>W1810090658
PGGI01000058
Bacillota
Limosilactobacillus fermentum 279 [PGGI]
252
326
+
Thr
CGT
[ENA]
¡û
>W1810090707
PGGJ01000096
Bacillota
Limosilactobacillus fermentum 311 [PGGJ]
251
325
+
Thr
CGT
[ENA]
¡û
>W1810190865
PKKD01000097
Bacillota
Limosilactobacillus fermentum UMB0187 [PKKD]
216
290
+
Thr
CGT
[ENA]
¡û
>W1810196550
PNBB01000071
Bacillota
Limosilactobacillus fermentum LfU21 [PNBB]
411
485
+
Thr
CGT
[ENA]
¡û
>W1810223800
POTQ01000030
Bacillota
Limosilactobacillus fermentum CRL1446 [POTQ]
13031
12957
-
Thr
CGT
[ENA]
¡û
>W1810297090
PTLW01000072
Bacillota
Limosilactobacillus fermentum MD IIE-4657 [PTLW]
225
298
+
Thr
CGT
[ENA]
¡û
>W1810452877
PZQN01000051
Bacillota
Limosilactobacillus reuteri LR5A [PZQN]
3136
3062
-
Thr
CGT
[ENA]
¡û
>W1810452941
PZQO01000046
Bacillota
Limosilactobacillus reuteri E81 [PZQO]
3303
3229
-
Thr
CGT
[ENA]
¡û
>W1810472878
QAHC01000069
Bacillota
Limosilactobacillus reuteri DS14_10 [QAHC]
254
328
+
Thr
CGT
[ENA]
¡û
>W1810472935
QAHD01000081
Bacillota
Limosilactobacillus reuteri DS13_10 [QAHD]
118
192
+
Thr
CGT
[ENA]
¡û
>W1810473350
QAHK01000057
Bacillota
Limosilactobacillus fermentum DS13_7 [QAHK]
8178
8104
-
Thr
CGT
[ENA]
¡û
>W1810488589
QAZL01000092
Bacillota
Limosilactobacillus reuteri DS22_10 [QAZL]
300
226
-
Thr
CGT
[ENA]
¡û
>W1810488656
QAZM01000102
Bacillota
Limosilactobacillus reuteri DS17_10 [QAZM]
250
324
+
Thr
CGT
[ENA]
¡û
>W1810489183
QAZV01000069
Bacillota
Limosilactobacillus fermentum DS19_7 [QAZV]
3624
3550
-
Thr
CGT
[ENA]
¡û
>W1810595189
QGDR01000006
Bacillota
Limosilactobacillus mucosae AGR63 [QGDR]
86479
86553
+
Thr
CGT
[ENA]
¡û
>W1810597776
QGHO01000174
Bacillota
Limosilactobacillus reuteri LR19 [QGHO]
392
318
-
Thr
CGT
[ENA]
¡û
>W1810597858
QGHP01000244
Bacillota
Limosilactobacillus reuteri LR18 [QGHP]
488
414
-
Thr
CGT
[ENA]
¡û
>W1810597920
QGHQ01000083
Bacillota
Limosilactobacillus reuteri LR17 [QGHQ]
2748
2674
-
Thr
CGT
[ENA]
¡û
>W1810598000
QGHR01000154
Bacillota
Limosilactobacillus reuteri LR13 [QGHR]
251
177
-
Thr
CGT
[ENA]
¡û
>W1810598038
QGHS01000246
Bacillota
Limosilactobacillus reuteri LR12 [QGHS]
1175
1101
-
Thr
CGT
[ENA]
¡û
>W1810598137
QGHT01000220
Bacillota
Limosilactobacillus reuteri LR10 [QGHT]
488
414
-
Thr
CGT
[ENA]
¡û
>W1810598201
QGHU01000082
Bacillota
Limosilactobacillus reuteri LR4 [QGHU]
2748
2674
-
Thr
CGT
[ENA]
¡û
>W1810598274
QGHV01000163
Bacillota
Limosilactobacillus reuteri LR9 [QGHV]
719
645
-
Thr
CGT
[ENA]
¡û
>W1810598353
QGHW01000130
Bacillota
Limosilactobacillus reuteri LR8 [QGHW]
765
691
-
Thr
CGT
[ENA]
¡û
>W1810598390
QGHX01000244
Bacillota
Limosilactobacillus reuteri LR7 [QGHX]
1175
1101
-
Thr
CGT
[ENA]
¡û
>W1810598449
QGHY01000248
Bacillota
Limosilactobacillus reuteri LR6 [QGHY]
1175
1101
-
Thr
CGT
[ENA]
¡û
>W1810598539
QGHZ01000131
Bacillota
Limosilactobacillus reuteri LR14 [QGHZ]
251
177
-
Thr
CGT
[ENA]
¡û
>W1810598609
QGIA01000173
Bacillota
Limosilactobacillus reuteri LR11 [QGIA]
251
177
-
Thr
CGT
[ENA]
¡û
>W1810598661
QGIB01000101
Bacillota
Limosilactobacillus reuteri LR3 [QGIB]
2726
2652
-
Thr
CGT
[ENA]
¡û
>W1810598756
QGIC01000163
Bacillota
Limosilactobacillus reuteri LR2 [QGIC]
251
177
-
Thr
CGT
[ENA]
¡û
>W1810598827
QGID01000135
Bacillota
Limosilactobacillus reuteri LR1 [QGID]
251
177
-
Thr
CGT
[ENA]
¡û
>W1810695530
QLNN01000154
Bacillota
Limosilactobacillus fermentum LF2 [QLNN]
215
289
+
Thr
CGT
[ENA]
¡û
>W1810705690
QMJM01000124
Bacillota
Limosilactobacillus fermentum KMB_613 [QMJM]
158
232
+
Thr
CGT
[ENA]
¡û
>W1810811231
QRYA01000067
Bacillota
Limosilactobacillus fermentum AF16-22LB [QRYA]
171
245
+
Thr
CGT
[ENA]
¡û
>W1810811818
QRYM01000001
Bacillota
Limosilactobacillus fermentum AF15-40LB [QRYM]
171
245
+
Thr
CGT
[ENA]
¡û
>W1810814643
QSAL01000003
Bacillota
Limosilactobacillus fermentum AF11-4-H [QSAL]
380
454
+
Thr
CGT
[ENA]
¡û
>C151075295
CP011013
Bacillota
Limosilactobacillus mucosae LM1 [CP011013]
2091809
2091735
-
Thr
CGT
[Ensembl]
¡û
>C151075562
CP011024
Bacillota
Limosilactobacillus reuteri IRT [CP011024]
317406
317480
+
Thr
CGT
[Ensembl]
¡û
>C151084235
CP011536
Bacillota
Limosilactobacillus fermentum 3872 [CP011536]
301308
301382
+
Thr
CGT
-
¡û
>W10102075
ACOH01000011
Bacillota
Limosilactobacillus coleohominis 101-4-CHN [ACOH]
84658
84584
-
Thr
CGT
[ENA]
¡û
>W10103421
ACQG01000101
Bacillota
Limosilactobacillus fermentum 28-3-CHN [ACQG]
125
199
+
Thr
CGT
[ENA]
¡û
>W1510021774
BCAH01000014
Bacillota
Limosilactobacillus gorillae KZ01 [BCAH]
31981
31908
-
Thr
CGT
[ENA]
¡û
>W1510022564
CBZV010000053
Bacillota
Limosilactobacillus fermentum 222 [CBZV]
137
211
+
Thr
CGT
[ENA]
¡û
>W10124178
AEAX01000006
Bacillota
Limosilactobacillus reuteri lpuph [AEAX]
233
159
-
Thr
CGT
[ENA]
¡û
>C10108338
CP002033
Bacillota
Limosilactobacillus fermentum CECT 5716 [CP002033]
279161
279235
+
Thr
CGT
[Ensembl]
¡û
>W11102231
ACOH01000011
Bacillota
Limosilactobacillus coleohominis 101-4-CHN [ACOH]
84658
84584
-
Thr
CGT
[ENA]
¡û
>W11103577
ACQG01000101
Bacillota
Limosilactobacillus fermentum 28-3-CHN [ACQG]
125
199
+
Thr
CGT
[ENA]
¡û
>W1510650192
CVQW01000011
Bacillota
Limosilactobacillus mucosae LM1 Marseille [CVQW]
430
504
+
Thr
CGT
[ENA]
¡û
>C11113590
CP002844
Bacillota
Limosilactobacillus reuteri SD2112 [CP002844]
1494650
1494724
+
Thr
CGT
[Ensembl]
¡û
>W1511274999
JOOG01000004
Bacillota
Limosilactobacillus reuteri LTH5448 [JOOG]
24685
24759
+
Thr
CGT
[ENA]
¡û
>W1511352417
JROC01000038
Bacillota
Limosilactobacillus mucosae CRL573 [JROC]
261194
261120
-
Thr
CGT
[ENA]
¡û
>W1511388658
JSWI01000001
Bacillota
Limosilactobacillus mucosae DPC 6426 [JSWI]
3412
3486
+
Thr
CGT
[ENA]
¡û
>W1511443762
JUTH01000091
Bacillota
Limosilactobacillus fermentum 779_LFER [JUTH]
125
52
-
Thr
CGT
[ENA]
¡û
>W11131015
AEAX01000006
Bacillota
Limosilactobacillus reuteri lpuph [AEAX]
233
159
-
Thr
CGT
[ENA]
¡û
>W11139783
AEKL01000089
Bacillota
Limosilactobacillus oris PB013-T2-3 [AEKL]
750
825
+
Thr
CGT
[ENA]
¡û
>W1511567823
LAIK01000005
Bacillota
Limosilactobacillus fermentum LfQi6 [LAIK]
260884
260810
-
Thr
CGT
[ENA]
¡û
>W1511589497
LBDG01000043
Bacillota
Limosilactobacillus fermentum 39 [LBDG]
4495
4421
-
Thr
CGT
[ENA]
¡û
>W1511589550
LBDH01000079
Bacillota
Limosilactobacillus fermentum 90 TC-4 [LBDH]
2858
2784
-
Thr
CGT
[ENA]
¡û
>W1511639267
LDPB01000108
Bacillota
Limosilactobacillus panis DSM 6035 [LDPB]
785
860
+
Thr
CGT
[ENA]
¡û
>W11173043
AFTL01000017
Bacillota
Limosilactobacillus oris F0423 [AFTL]
4556
4631
+
Thr
CGT
[ENA]
¡û
>C161077716
CP014787
Bacillota
Limosilactobacillus oris J-1 [CP014787]
1627269
1627195
-
Thr
CGT
-
¡û
>C161087505
CP015408
Bacillota
Limosilactobacillus reuteri I49 [CP015408]
2005267
2005341
+
Thr
CGT
-
¡û
>W121033317
AHIT01000013
Bacillota
Limosilactobacillus mucosae LM1 [AHIT]
116
190
+
Thr
CGT
[ENA]
¡û
>W1610033660
AZDD01000002
Bacillota
Limosilactobacillus reuteri DSM 20016 [AZDD]
1122
1048
-
Thr
CGT
[ENA]
¡û
>W1610035611
AZEQ01000001
Bacillota
Limosilactobacillus mucosae DSM 13345 [AZEQ]
51
125
+
Thr
CGT
[ENA]
¡û
>W1610035654
AZER01000005
Bacillota
Limosilactobacillus frumenti DSM 13145 [AZER]
285
359
+
Thr
CGT
[ENA]
¡û
>W1610035910
AZEW01000362
Bacillota
Limosilactobacillus coleohominis DSM 14060 [AZEW]
1443
1369
-
Thr
CGT
[ENA]
¡û
>W1610036598
AZFK01000047
Bacillota
Limosilactobacillus ingluviei DSM 15946 [AZFK]
63875
63800
-
Thr
CGT
[ENA]
¡û
>W1610037652
AZGE01000046
Bacillota
Limosilactobacillus oris DSM 4864 [AZGE]
700
775
+
Thr
CGT
[ENA]
¡û
>W1610038028
AZGM01000090
Bacillota
Limosilactobacillus panis DSM 6035 [AZGM]
3475
3400
-
Thr
CGT
[ENA]
¡û
>W1610083154
CBUR010000006
Bacillota
Limosilactobacillus fermentum L930BB [CBUR]
216
290
+
Thr
CGT
[ENA]
¡û
>W1610104993
CZDC01000086
Bacillota
Limosilactobacillus reuteri [CZDC]
143
217
+
Thr
CGT
[ENA]
¡û
>W1610105088
CZDD01000129
Bacillota
Limosilactobacillus reuteri [CZDD]
142
216
+
Thr
CGT
[ENA]
¡û
>C131016158
CP005958
Bacillota
Limosilactobacillus fermentum F-6 [CP005958]
277634
277708
+
Thr
CGT
[Ensembl]
¡û
>W1610527956
JQAU01000072
Bacillota
Limosilactobacillus fermentum [JQAU]
1082
1009
-
Thr
CGT
[ENA]
¡û
>W1610528231
JQBA01000069
Bacillota
Limosilactobacillus ingluviei [JQBA]
41
116
+
Thr
CGT
[ENA]
¡û
>W1610647405
LJFJ01000006
Bacillota
Limosilactobacillus fermentum [LJFJ]
75639
75713
+
Thr
CGT
[ENA]
¡û
>W1610665510
LJWZ01000011
Bacillota
Limosilactobacillus fermentum [LJWZ]
224
298
+
Thr
CGT
[ENA]
¡û
>W1611022814
LYWI01000029
Bacillota
Limosilactobacillus reuteri [LYWI]
3010
2936
-
Thr
CGT
[ENA]
¡û
>W1710030838
AZDD01000002
Bacillota
Limosilactobacillus reuteri DSM 20016 [AZDD]
1122
1048
-
Thr
CGT
[ENA]
¡û
>W1710032650
AZEQ01000001
Bacillota
Limosilactobacillus mucosae DSM 13345 [AZEQ]
51
125
+
Thr
CGT
[ENA]
¡û
>W1710032693
AZER01000005
Bacillota
Limosilactobacillus frumenti DSM 13145 [AZER]
285
359
+
Thr
CGT
[ENA]
¡û
>W1710032949
AZEW01000362
Bacillota
Limosilactobacillus coleohominis DSM 14060 [AZEW]
1443
1369
-
Thr
CGT
[ENA]
¡û
>W1710033637
AZFK01000047
Bacillota
Limosilactobacillus ingluviei DSM 15946 [AZFK]
63875
63800
-
Thr
CGT
[ENA]
¡û
>W1710034691
AZGE01000046
Bacillota
Limosilactobacillus oris DSM 4864 [AZGE]
700
775
+
Thr
CGT
[ENA]
¡û
>W1710035020
AZGM01000090
Bacillota
Limosilactobacillus panis DSM 6035 [AZGM]
3475
3400
-
Thr
CGT
[ENA]
¡û
>W1710088274
CBUR010000006
Bacillota
Limosilactobacillus fermentum L930BB [CBUR]
216
290
+
Thr
CGT
[ENA]
¡û
>W1710107697
CZDC01000086
Bacillota
Limosilactobacillus reuteri [CZDC]
143
217
+
Thr
CGT
[ENA]
¡û
>W1710107792
CZDD01000129
Bacillota
Limosilactobacillus reuteri [CZDD]
142
216
+
Thr
CGT
[ENA]
¡û
>W1710523860
FNIH01000004
Bacillota
Limosilactobacillus mucosae [FNIH]
410
484
+
Thr
CGT
[ENA]
¡û
>W1710543403
FNZY01000004
Bacillota
Limosilactobacillus mucosae [FNZY]
270
344
+
Thr
CGT
[ENA]
¡û
>W1710566924
FOSI01000004
Bacillota
Limosilactobacillus mucosae [FOSI]
167112
167038
-
Thr
CGT
[ENA]
¡û
>W1710629587
JQAU01000072
Bacillota
Limosilactobacillus fermentum [JQAU]
1082
1009
-
Thr
CGT
[ENA]
¡û
>W1710629821
JQBA01000069
Bacillota
Limosilactobacillus ingluviei [JQBA]
41
116
+
Thr
CGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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